RNA–Protein interactions for RNA: ENST00000509272.1

SLC1A3-210, Transcript of solute carrier family 1 member 3, humanhuman

TSL 4

Gene SLC1A3, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-210ENST00000509272 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
SLC1A3-210ENST00000509272 ABCC9O60706 1549 aa19.72■□□□□ 0.75
SLC1A3-210ENST00000509272 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
SLC1A3-210ENST00000509272 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.6
SLC1A3-210ENST00000509272 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
SLC1A3-210ENST00000509272 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
SLC1A3-210ENST00000509272 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
SLC1A3-210ENST00000509272 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
SLC1A3-210ENST00000509272 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
SLC1A3-210ENST00000509272 NACADO15069 1562 aa17.81■□□□□ 0.44
SLC1A3-210ENST00000509272 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
SLC1A3-210ENST00000509272 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
SLC1A3-210ENST00000509272 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
SLC1A3-210ENST00000509272 TRIM41Q8WV44 630 aa17.5■□□□□ 0.39
SLC1A3-210ENST00000509272 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
SLC1A3-210ENST00000509272 CUX2O14529 1486 aa17.42■□□□□ 0.38
SLC1A3-210ENST00000509272 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
SLC1A3-210ENST00000509272 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
SLC1A3-210ENST00000509272 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
SLC1A3-210ENST00000509272 SCRIBQ14160 1630 aa16.89■□□□□ 0.29
SLC1A3-210ENST00000509272 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
SLC1A3-210ENST00000509272 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
SLC1A3-210ENST00000509272 NESP48681 1621 aa16.63■□□□□ 0.25
SLC1A3-210ENST00000509272 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
SLC1A3-210ENST00000509272 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
SLC1A3-210ENST00000509272 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
SLC1A3-210ENST00000509272 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
SLC1A3-210ENST00000509272 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
SLC1A3-210ENST00000509272 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
SLC1A3-210ENST00000509272 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
SLC1A3-210ENST00000509272 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
SLC1A3-210ENST00000509272 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
SLC1A3-210ENST00000509272 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
SLC1A3-210ENST00000509272 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
SLC1A3-210ENST00000509272 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
SLC1A3-210ENST00000509272 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
SLC1A3-210ENST00000509272 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
SLC1A3-210ENST00000509272 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
SLC1A3-210ENST00000509272 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
SLC1A3-210ENST00000509272 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
SLC1A3-210ENST00000509272 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
SLC1A3-210ENST00000509272 WDR62O43379 1518 aa16.15■□□□□ 0.18
SLC1A3-210ENST00000509272 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
SLC1A3-210ENST00000509272 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
SLC1A3-210ENST00000509272 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
SLC1A3-210ENST00000509272 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
SLC1A3-210ENST00000509272 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
SLC1A3-210ENST00000509272 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
SLC1A3-210ENST00000509272 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
SLC1A3-210ENST00000509272 CHD1O14646 1710 aa15.76■□□□□ 0.11
SLC1A3-210ENST00000509272 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
SLC1A3-210ENST00000509272 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
SLC1A3-210ENST00000509272 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
SLC1A3-210ENST00000509272 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
SLC1A3-210ENST00000509272 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.08
SLC1A3-210ENST00000509272 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
SLC1A3-210ENST00000509272 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
SLC1A3-210ENST00000509272 FBLN2P98095 1184 aa15.54■□□□□ 0.08
SLC1A3-210ENST00000509272 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
SLC1A3-210ENST00000509272 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
SLC1A3-210ENST00000509272 CFTRP13569 1480 aa15.46■□□□□ 0.06
SLC1A3-210ENST00000509272 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
SLC1A3-210ENST00000509272 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
SLC1A3-210ENST00000509272 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.06
SLC1A3-210ENST00000509272 FBXO41Q8TF61 875 aa15.4■□□□□ 0.06
SLC1A3-210ENST00000509272 LMTK3Q96Q04 1460 aa15.39■□□□□ 0.05
SLC1A3-210ENST00000509272 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
SLC1A3-210ENST00000509272 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
SLC1A3-210ENST00000509272 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
SLC1A3-210ENST00000509272 WIZO95785 1651 aa15.33■□□□□ 0.04
SLC1A3-210ENST00000509272 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
SLC1A3-210ENST00000509272 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
SLC1A3-210ENST00000509272 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
SLC1A3-210ENST00000509272 SOCS7O14512 581 aa15.29■□□□□ 0.04
SLC1A3-210ENST00000509272 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
SLC1A3-210ENST00000509272 KDM6BO15054 1643 aa15.22■□□□□ 0.03
SLC1A3-210ENST00000509272 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
SLC1A3-210ENST00000509272 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
SLC1A3-210ENST00000509272 ADGRL1O94910 1474 aa15.16■□□□□ 0.02
SLC1A3-210ENST00000509272 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
SLC1A3-210ENST00000509272 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
SLC1A3-210ENST00000509272 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
SLC1A3-210ENST00000509272 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
SLC1A3-210ENST00000509272 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
SLC1A3-210ENST00000509272 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
SLC1A3-210ENST00000509272 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
SLC1A3-210ENST00000509272 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
SLC1A3-210ENST00000509272 ABCC10Q5T3U5 1492 aa15.07■□□□□ 0
SLC1A3-210ENST00000509272 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
SLC1A3-210ENST00000509272 DISP3Q9P2K9 1392 aa15.06■□□□□ 0
SLC1A3-210ENST00000509272 DIP2BQ9P265 1576 aa15.03■□□□□ -0
SLC1A3-210ENST00000509272 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
SLC1A3-210ENST00000509272 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
SLC1A3-210ENST00000509272 SOGA1O94964 1423 aa14.98□□□□□ -0.01
SLC1A3-210ENST00000509272 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
SLC1A3-210ENST00000509272 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
SLC1A3-210ENST00000509272 PBRM1Q86U86 1689 aa14.95□□□□□ -0.02
SLC1A3-210ENST00000509272 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
SLC1A3-210ENST00000509272 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
SLC1A3-210ENST00000509272 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms