RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
SSBP2-211ENST00000509013 CHIC1Q5VXU3 224 aa15.53■□□□□ 0.08
SSBP2-211ENST00000509013 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
SSBP2-211ENST00000509013 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
SSBP2-211ENST00000509013 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
SSBP2-211ENST00000509013 ABCC9O60706 1549 aa13.97□□□□□ -0.17
SSBP2-211ENST00000509013 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
SSBP2-211ENST00000509013 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
SSBP2-211ENST00000509013 FOXD1Q16676 465 aa13.3□□□□□ -0.28
SSBP2-211ENST00000509013 RB1CC1Q8TDY2 1594 aa13.16□□□□□ -0.3
SSBP2-211ENST00000509013 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
SSBP2-211ENST00000509013 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
SSBP2-211ENST00000509013 NACADO15069 1562 aa13.02□□□□□ -0.33
SSBP2-211ENST00000509013 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.37
SSBP2-211ENST00000509013 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
SSBP2-211ENST00000509013 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
SSBP2-211ENST00000509013 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SSBP2-211ENST00000509013 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
SSBP2-211ENST00000509013 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
SSBP2-211ENST00000509013 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
SSBP2-211ENST00000509013 MSH5O43196 834 aa12.55□□□□□ -0.4
SSBP2-211ENST00000509013 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
SSBP2-211ENST00000509013 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.41
SSBP2-211ENST00000509013 EIF4G1Q04637 1599 aaKnown RBP12.48□□□□□ -0.41
SSBP2-211ENST00000509013 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
SSBP2-211ENST00000509013 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
SSBP2-211ENST00000509013 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
SSBP2-211ENST00000509013 PLPPR3Q6T4P5 718 aa12.26□□□□□ -0.45
SSBP2-211ENST00000509013 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
SSBP2-211ENST00000509013 ADRA2BP18089 450 aa12.16□□□□□ -0.46
SSBP2-211ENST00000509013 CUX2O14529 1486 aa12.12□□□□□ -0.47
SSBP2-211ENST00000509013 ERCC6Q03468 1493 aa12.08□□□□□ -0.47
SSBP2-211ENST00000509013 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
SSBP2-211ENST00000509013 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
SSBP2-211ENST00000509013 NESP48681 1621 aa11.93□□□□□ -0.5
SSBP2-211ENST00000509013 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
SSBP2-211ENST00000509013 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
SSBP2-211ENST00000509013 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
SSBP2-211ENST00000509013 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
SSBP2-211ENST00000509013 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
SSBP2-211ENST00000509013 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
SSBP2-211ENST00000509013 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
SSBP2-211ENST00000509013 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
SSBP2-211ENST00000509013 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
SSBP2-211ENST00000509013 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
SSBP2-211ENST00000509013 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.54
SSBP2-211ENST00000509013 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
SSBP2-211ENST00000509013 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
SSBP2-211ENST00000509013 MRC2Q9UBG0 1479 aa11.65□□□□□ -0.54
SSBP2-211ENST00000509013 WDR62O43379 1518 aa11.6□□□□□ -0.55
SSBP2-211ENST00000509013 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
SSBP2-211ENST00000509013 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
SSBP2-211ENST00000509013 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
SSBP2-211ENST00000509013 WIZO95785 1651 aa11.52□□□□□ -0.57
SSBP2-211ENST00000509013 CFTRP13569 1480 aa11.5□□□□□ -0.57
SSBP2-211ENST00000509013 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
SSBP2-211ENST00000509013 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
SSBP2-211ENST00000509013 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
SSBP2-211ENST00000509013 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
SSBP2-211ENST00000509013 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
SSBP2-211ENST00000509013 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
SSBP2-211ENST00000509013 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
SSBP2-211ENST00000509013 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
SSBP2-211ENST00000509013 CYB5RLQ6IPT4 315 aa11.34□□□□□ -0.59
SSBP2-211ENST00000509013 ARHGEF11O15085 1522 aa11.34□□□□□ -0.59
SSBP2-211ENST00000509013 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
SSBP2-211ENST00000509013 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
SSBP2-211ENST00000509013 CCDC88BA6NC98 1476 aa11.28□□□□□ -0.6
SSBP2-211ENST00000509013 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
SSBP2-211ENST00000509013 ABCC8Q09428 1581 aa11.26□□□□□ -0.61
SSBP2-211ENST00000509013 FBLN2P98095 1184 aa11.26□□□□□ -0.61
SSBP2-211ENST00000509013 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
SSBP2-211ENST00000509013 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
SSBP2-211ENST00000509013 DMRT2Q9Y5R5 561 aa11.23□□□□□ -0.61
SSBP2-211ENST00000509013 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
SSBP2-211ENST00000509013 ARAP1Q96P48 1450 aa11.21□□□□□ -0.61
SSBP2-211ENST00000509013 DNMBPQ6XZF7 1577 aa11.2□□□□□ -0.62
SSBP2-211ENST00000509013 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
SSBP2-211ENST00000509013 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
SSBP2-211ENST00000509013 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
SSBP2-211ENST00000509013 CHD1O14646 1710 aa11.15□□□□□ -0.63
SSBP2-211ENST00000509013 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
SSBP2-211ENST00000509013 CHMP7Q8WUX9 453 aaPredicted RBP11.14□□□□□ -0.63
SSBP2-211ENST00000509013 SOGA1O94964 1423 aa11.14□□□□□ -0.63
SSBP2-211ENST00000509013 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
SSBP2-211ENST00000509013 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
SSBP2-211ENST00000509013 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
SSBP2-211ENST00000509013 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
SSBP2-211ENST00000509013 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
SSBP2-211ENST00000509013 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
SSBP2-211ENST00000509013 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
SSBP2-211ENST00000509013 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
SSBP2-211ENST00000509013 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
SSBP2-211ENST00000509013 GAPVD1Q14C86 1478 aa11□□□□□ -0.65
SSBP2-211ENST00000509013 CUX1P39880 1505 aa11□□□□□ -0.65
SSBP2-211ENST00000509013 CACNB1Q02641 598 aaPredicted RBP10.95□□□□□ -0.66
SSBP2-211ENST00000509013 ABCA10Q8WWZ4 1543 aa10.92□□□□□ -0.66
SSBP2-211ENST00000509013 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
SSBP2-211ENST00000509013 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
SSBP2-211ENST00000509013 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms