RNA–Protein interactions for RNA: ENST00000508965.5

PRDM8-207, Transcript of PR/SET domain 8, humanhuman

TSL 3

Gene PRDM8, Length 649 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-207ENST00000508965 NISCHQ9Y2I1 1504 aa45.16■■■■■ 4.82
PRDM8-207ENST00000508965 CCDC180Q9P1Z9 1646 aa40.13■■■■■ 4.02
PRDM8-207ENST00000508965 ABCC9O60706 1549 aa39.22■■■■□ 3.87
PRDM8-207ENST00000508965 NACADO15069 1562 aa37.77■■■■□ 3.64
PRDM8-207ENST00000508965 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.63
PRDM8-207ENST00000508965 MYO15BQ96JP2 1530 aa37.68■■■■□ 3.62
PRDM8-207ENST00000508965 ZCCHC6Q5VYS8 1495 aaKnown RBP37.63■■■■□ 3.61
PRDM8-207ENST00000508965 DCAF1Q9Y4B6 1507 aa37.46■■■■□ 3.59
PRDM8-207ENST00000508965 DCAF8L2P0C7V8 631 aa37.42■■■■□ 3.58
PRDM8-207ENST00000508965 UNC13AQ9UPW8 1703 aa36.89■■■■□ 3.5
PRDM8-207ENST00000508965 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
PRDM8-207ENST00000508965 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
PRDM8-207ENST00000508965 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
PRDM8-207ENST00000508965 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
PRDM8-207ENST00000508965 DNAJC5BQ9UF47 199 aa36.22■■■■□ 3.39
PRDM8-207ENST00000508965 EIF4G1Q04637 1599 aaKnown RBP35.69■■■■□ 3.3
PRDM8-207ENST00000508965 CC2D2AQ9P2K1 1620 aa35.53■■■■□ 3.28
PRDM8-207ENST00000508965 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
PRDM8-207ENST00000508965 SMARCA4P51532 1647 aa35■■■■□ 3.19
PRDM8-207ENST00000508965 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
PRDM8-207ENST00000508965 NCAPD3P42695 1498 aa34.93■■■■□ 3.18
PRDM8-207ENST00000508965 ATAD2BQ9ULI0 1458 aa34.89■■■■□ 3.18
PRDM8-207ENST00000508965 PEG3Q9GZU2 1588 aa34.79■■■■□ 3.16
PRDM8-207ENST00000508965 SMARCA2P51531 1590 aa34.78■■■■□ 3.16
PRDM8-207ENST00000508965 MROH2BQ7Z745 1585 aa34.78■■■■□ 3.16
PRDM8-207ENST00000508965 HMGXB3Q12766 1538 aa34.7■■■■□ 3.14
PRDM8-207ENST00000508965 BAZ1BQ9UIG0 1483 aaKnown RBP34.48■■■■□ 3.11
PRDM8-207ENST00000508965 RSF1Q96T23 1441 aaPredicted RBP34.39■■■■□ 3.1
PRDM8-207ENST00000508965 WIZO95785 1651 aa34.32■■■■□ 3.08
PRDM8-207ENST00000508965 TOP2AP11388 1531 aaKnown RBP34.01■■■■□ 3.04
PRDM8-207ENST00000508965 NESP48681 1621 aa33.97■■■■□ 3.03
PRDM8-207ENST00000508965 LAMC3Q9Y6N6 1575 aa33.92■■■■□ 3.02
PRDM8-207ENST00000508965 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
PRDM8-207ENST00000508965 ERCC6Q03468 1493 aa33.74■■■□□ 2.99
PRDM8-207ENST00000508965 CFTRP13569 1480 aa33.68■■■□□ 2.98
PRDM8-207ENST00000508965 PDS5BQ9NTI5 1447 aa33.67■■■□□ 2.98
PRDM8-207ENST00000508965 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
PRDM8-207ENST00000508965 CUX2O14529 1486 aa33.57■■■□□ 2.97
PRDM8-207ENST00000508965 THOC2Q8NI27 1593 aaKnown RBP33.52■■■□□ 2.96
PRDM8-207ENST00000508965 KIF21AQ7Z4S6 1674 aa33.52■■■□□ 2.96
PRDM8-207ENST00000508965 FANCD2Q9BXW9 1451 aa33.39■■■□□ 2.94
PRDM8-207ENST00000508965 MRC2Q9UBG0 1479 aa33.32■■■□□ 2.92
PRDM8-207ENST00000508965 CEP164Q9UPV0 1460 aa33.32■■■□□ 2.92
PRDM8-207ENST00000508965 WDR62O43379 1518 aa33.28■■■□□ 2.92
PRDM8-207ENST00000508965 PRDM2Q13029 1718 aa33.25■■■□□ 2.91
PRDM8-207ENST00000508965 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
PRDM8-207ENST00000508965 URB2Q14146 1524 aaKnown RBP33.11■■■□□ 2.89
PRDM8-207ENST00000508965 TOPBP1Q92547 1522 aa32.88■■■□□ 2.85
PRDM8-207ENST00000508965 ABCC8Q09428 1581 aa32.87■■■□□ 2.85
PRDM8-207ENST00000508965 DNMBPQ6XZF7 1577 aa32.82■■■□□ 2.84
PRDM8-207ENST00000508965 IFT140Q96RY7 1462 aa32.68■■■□□ 2.82
PRDM8-207ENST00000508965 DNAJC5Q9H3Z4 198 aa32.64■■■□□ 2.82
PRDM8-207ENST00000508965 CUX1P39880 1505 aa32.62■■■□□ 2.81
PRDM8-207ENST00000508965 POLA1P09884 1462 aaPredicted RBP32.61■■■□□ 2.81
PRDM8-207ENST00000508965 TARBP1Q13395 1621 aaKnown RBP32.57■■■□□ 2.8
PRDM8-207ENST00000508965 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
PRDM8-207ENST00000508965 FGD5Q6ZNL6 1462 aa32.47■■■□□ 2.79
PRDM8-207ENST00000508965 SOGA1O94964 1423 aa32.43■■■□□ 2.78
PRDM8-207ENST00000508965 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
PRDM8-207ENST00000508965 EIF4G3O43432 1585 aaKnown RBP32.36■■■□□ 2.77
PRDM8-207ENST00000508965 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
PRDM8-207ENST00000508965 AQRO60306 1485 aaKnown RBP eCLIP32.32■■■□□ 2.76
PRDM8-207ENST00000508965 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
PRDM8-207ENST00000508965 WDR97A6NE52 1622 aa32.31■■■□□ 2.76
PRDM8-207ENST00000508965 BIVM-ERCC5R4GMW8 1640 aa32.31■■■□□ 2.76
PRDM8-207ENST00000508965 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
PRDM8-207ENST00000508965 TDRD9Q8NDG6 1382 aaKnown RBP32.24■■■□□ 2.75
PRDM8-207ENST00000508965 ABCA10Q8WWZ4 1543 aa32.24■■■□□ 2.75
PRDM8-207ENST00000508965 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
PRDM8-207ENST00000508965 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
PRDM8-207ENST00000508965 GRIN2BQ13224 1484 aa32.07■■■□□ 2.72
PRDM8-207ENST00000508965 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
PRDM8-207ENST00000508965 MAGI1Q96QZ7 1491 aaPredicted RBP32.02■■■□□ 2.72
PRDM8-207ENST00000508965 SNAPC4Q5SXM2 1469 aa31.99■■■□□ 2.71
PRDM8-207ENST00000508965 PBRM1Q86U86 1689 aa31.91■■■□□ 2.7
PRDM8-207ENST00000508965 CHD1O14646 1710 aa31.9■■■□□ 2.7
PRDM8-207ENST00000508965 SYNJ2O15056 1496 aa31.88■■■□□ 2.69
PRDM8-207ENST00000508965 ERICH3Q5RHP9 1530 aa31.83■■■□□ 2.69
PRDM8-207ENST00000508965 FBLN2P98095 1184 aa31.76■■■□□ 2.67
PRDM8-207ENST00000508965 CHMP7Q8WUX9 453 aaPredicted RBP31.76■■■□□ 2.67
PRDM8-207ENST00000508965 ADAMTS12P58397 1594 aa31.74■■■□□ 2.67
PRDM8-207ENST00000508965 CLASP1Q7Z460 1538 aa31.71■■■□□ 2.67
PRDM8-207ENST00000508965 FHAD1B1AJZ9 1412 aa31.71■■■□□ 2.67
PRDM8-207ENST00000508965 GRIN2AQ12879 1464 aa31.66■■■□□ 2.66
PRDM8-207ENST00000508965 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
PRDM8-207ENST00000508965 IGF1RP08069 1367 aa31.65■■■□□ 2.66
PRDM8-207ENST00000508965 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
PRDM8-207ENST00000508965 NUP160Q12769 1436 aa31.61■■■□□ 2.65
PRDM8-207ENST00000508965 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
PRDM8-207ENST00000508965 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
PRDM8-207ENST00000508965 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
PRDM8-207ENST00000508965 CEP170Q5SW79 1584 aa31.51■■■□□ 2.63
PRDM8-207ENST00000508965 CUL7Q14999 1698 aa31.44■■■□□ 2.62
PRDM8-207ENST00000508965 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
PRDM8-207ENST00000508965 RUSC2Q8N2Y8 1516 aa31.39■■■□□ 2.62
PRDM8-207ENST00000508965 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
PRDM8-207ENST00000508965 CARMIL1Q5VZK9 1371 aa31.37■■■□□ 2.61
PRDM8-207ENST00000508965 SHROOM2Q13796 1616 aa31.35■■■□□ 2.61
PRDM8-207ENST00000508965 KIAA0586Q9BVV6 1533 aa31.24■■■□□ 2.59
PRDM8-207ENST00000508965 CYB5RLQ6IPT4 315 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms