RNA–Protein interactions for RNA: ENST00000508960.1

PDK2-210, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 2

Gene PDK2, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-210ENST00000508960 NISCHQ9Y2I1 1504 aa34.44■■■■□ 3.1
PDK2-210ENST00000508960 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
PDK2-210ENST00000508960 ABCC9O60706 1549 aa29.1■■■□□ 2.25
PDK2-210ENST00000508960 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
PDK2-210ENST00000508960 DCAF1Q9Y4B6 1507 aa28.57■■■□□ 2.16
PDK2-210ENST00000508960 MYO15BQ96JP2 1530 aa28.47■■■□□ 2.15
PDK2-210ENST00000508960 NACADO15069 1562 aa28.46■■■□□ 2.15
PDK2-210ENST00000508960 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
PDK2-210ENST00000508960 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
PDK2-210ENST00000508960 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.07
PDK2-210ENST00000508960 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
PDK2-210ENST00000508960 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
PDK2-210ENST00000508960 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
PDK2-210ENST00000508960 PABPN1Q86U42 306 aaKnown RBP eCLIP27.14■■□□□ 1.94
PDK2-210ENST00000508960 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
PDK2-210ENST00000508960 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
PDK2-210ENST00000508960 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
PDK2-210ENST00000508960 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
PDK2-210ENST00000508960 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
PDK2-210ENST00000508960 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
PDK2-210ENST00000508960 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
PDK2-210ENST00000508960 WIZO95785 1651 aa26.38■■□□□ 1.81
PDK2-210ENST00000508960 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
PDK2-210ENST00000508960 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
PDK2-210ENST00000508960 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
PDK2-210ENST00000508960 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
PDK2-210ENST00000508960 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
PDK2-210ENST00000508960 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
PDK2-210ENST00000508960 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
PDK2-210ENST00000508960 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
PDK2-210ENST00000508960 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
PDK2-210ENST00000508960 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
PDK2-210ENST00000508960 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
PDK2-210ENST00000508960 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
PDK2-210ENST00000508960 CFTRP13569 1480 aa25.4■■□□□ 1.66
PDK2-210ENST00000508960 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
PDK2-210ENST00000508960 NESP48681 1621 aa25.37■■□□□ 1.65
PDK2-210ENST00000508960 KIF21AQ7Z4S6 1674 aa25.3■■□□□ 1.64
PDK2-210ENST00000508960 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
PDK2-210ENST00000508960 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
PDK2-210ENST00000508960 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
PDK2-210ENST00000508960 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
PDK2-210ENST00000508960 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
PDK2-210ENST00000508960 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
PDK2-210ENST00000508960 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
PDK2-210ENST00000508960 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.58
PDK2-210ENST00000508960 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
PDK2-210ENST00000508960 WDR62O43379 1518 aa24.9■■□□□ 1.58
PDK2-210ENST00000508960 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
PDK2-210ENST00000508960 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
PDK2-210ENST00000508960 TOP2BQ02880 1626 aa24.89■■□□□ 1.57
PDK2-210ENST00000508960 CUX1P39880 1505 aa24.88■■□□□ 1.57
PDK2-210ENST00000508960 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
PDK2-210ENST00000508960 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
PDK2-210ENST00000508960 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.55
PDK2-210ENST00000508960 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
PDK2-210ENST00000508960 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
PDK2-210ENST00000508960 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
PDK2-210ENST00000508960 CUX2O14529 1486 aa24.62■■□□□ 1.53
PDK2-210ENST00000508960 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
PDK2-210ENST00000508960 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
PDK2-210ENST00000508960 IFT140Q96RY7 1462 aa24.53■■□□□ 1.52
PDK2-210ENST00000508960 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
PDK2-210ENST00000508960 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
PDK2-210ENST00000508960 SOGA1O94964 1423 aa24.49■■□□□ 1.51
PDK2-210ENST00000508960 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
PDK2-210ENST00000508960 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
PDK2-210ENST00000508960 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
PDK2-210ENST00000508960 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
PDK2-210ENST00000508960 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
PDK2-210ENST00000508960 EEA1Q15075 1411 aa24.28■■□□□ 1.48
PDK2-210ENST00000508960 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
PDK2-210ENST00000508960 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
PDK2-210ENST00000508960 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
PDK2-210ENST00000508960 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
PDK2-210ENST00000508960 CUL7Q14999 1698 aa24.24■■□□□ 1.47
PDK2-210ENST00000508960 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.47
PDK2-210ENST00000508960 GRIN2BQ13224 1484 aa24.2■■□□□ 1.47
PDK2-210ENST00000508960 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
PDK2-210ENST00000508960 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
PDK2-210ENST00000508960 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
PDK2-210ENST00000508960 CHD1O14646 1710 aa24.1■■□□□ 1.45
PDK2-210ENST00000508960 KIF21BO75037 1637 aa24.1■■□□□ 1.45
PDK2-210ENST00000508960 IGF1RP08069 1367 aa24.05■■□□□ 1.44
PDK2-210ENST00000508960 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
PDK2-210ENST00000508960 CSRNP3Q8WYN3 585 aa24.01■■□□□ 1.43
PDK2-210ENST00000508960 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
PDK2-210ENST00000508960 PRXQ9BXM0 1461 aa24■■□□□ 1.43
PDK2-210ENST00000508960 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
PDK2-210ENST00000508960 CTTNBP2Q8WZ74 1663 aa23.98■■□□□ 1.43
PDK2-210ENST00000508960 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
PDK2-210ENST00000508960 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
PDK2-210ENST00000508960 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
PDK2-210ENST00000508960 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
PDK2-210ENST00000508960 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
PDK2-210ENST00000508960 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
PDK2-210ENST00000508960 NUP160Q12769 1436 aa23.76■■□□□ 1.39
PDK2-210ENST00000508960 FBLN2P98095 1184 aa23.75■■□□□ 1.39
PDK2-210ENST00000508960 IQGAP2Q13576 1575 aa23.73■■□□□ 1.39
PDK2-210ENST00000508960 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms