RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
LDB2-211ENST00000508918 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
LDB2-211ENST00000508918 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
LDB2-211ENST00000508918 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
LDB2-211ENST00000508918 ABCC9O60706 1549 aa25.56■■□□□ 1.68
LDB2-211ENST00000508918 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
LDB2-211ENST00000508918 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
LDB2-211ENST00000508918 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
LDB2-211ENST00000508918 NACADO15069 1562 aa25.14■■□□□ 1.62
LDB2-211ENST00000508918 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.59
LDB2-211ENST00000508918 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
LDB2-211ENST00000508918 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
LDB2-211ENST00000508918 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
LDB2-211ENST00000508918 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.47
LDB2-211ENST00000508918 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
LDB2-211ENST00000508918 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
LDB2-211ENST00000508918 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
LDB2-211ENST00000508918 MROH2BQ7Z745 1585 aa23.9■■□□□ 1.42
LDB2-211ENST00000508918 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.41
LDB2-211ENST00000508918 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
LDB2-211ENST00000508918 WIZO95785 1651 aa23.73■■□□□ 1.39
LDB2-211ENST00000508918 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
LDB2-211ENST00000508918 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
LDB2-211ENST00000508918 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
LDB2-211ENST00000508918 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
LDB2-211ENST00000508918 SMARCA2P51531 1590 aa23.39■■□□□ 1.34
LDB2-211ENST00000508918 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
LDB2-211ENST00000508918 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
LDB2-211ENST00000508918 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
LDB2-211ENST00000508918 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
LDB2-211ENST00000508918 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
LDB2-211ENST00000508918 CC2D2AQ9P2K1 1620 aa23.14■■□□□ 1.3
LDB2-211ENST00000508918 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
LDB2-211ENST00000508918 ABCC8Q09428 1581 aa22.74■■□□□ 1.23
LDB2-211ENST00000508918 CFTRP13569 1480 aa22.67■■□□□ 1.22
LDB2-211ENST00000508918 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
LDB2-211ENST00000508918 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
LDB2-211ENST00000508918 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
LDB2-211ENST00000508918 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
LDB2-211ENST00000508918 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
LDB2-211ENST00000508918 NESP48681 1621 aa22.44■■□□□ 1.18
LDB2-211ENST00000508918 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
LDB2-211ENST00000508918 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
LDB2-211ENST00000508918 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
LDB2-211ENST00000508918 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
LDB2-211ENST00000508918 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
LDB2-211ENST00000508918 CUX1P39880 1505 aa22.35■■□□□ 1.17
LDB2-211ENST00000508918 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
LDB2-211ENST00000508918 SOGA1O94964 1423 aa22.27■■□□□ 1.16
LDB2-211ENST00000508918 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
LDB2-211ENST00000508918 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
LDB2-211ENST00000508918 EEA1Q15075 1411 aa22.21■■□□□ 1.15
LDB2-211ENST00000508918 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
LDB2-211ENST00000508918 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
LDB2-211ENST00000508918 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
LDB2-211ENST00000508918 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
LDB2-211ENST00000508918 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
LDB2-211ENST00000508918 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
LDB2-211ENST00000508918 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
LDB2-211ENST00000508918 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
LDB2-211ENST00000508918 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
LDB2-211ENST00000508918 KIF27Q86VH2 1401 aa22■■□□□ 1.11
LDB2-211ENST00000508918 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
LDB2-211ENST00000508918 KIF21BO75037 1637 aa21.96■■□□□ 1.11
LDB2-211ENST00000508918 CUX2O14529 1486 aa21.95■■□□□ 1.1
LDB2-211ENST00000508918 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
LDB2-211ENST00000508918 GOLGA3Q08378 1498 aa21.92■■□□□ 1.1
LDB2-211ENST00000508918 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
LDB2-211ENST00000508918 ABCA10Q8WWZ4 1543 aa21.91■■□□□ 1.1
LDB2-211ENST00000508918 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
LDB2-211ENST00000508918 WDR62O43379 1518 aa21.86■■□□□ 1.09
LDB2-211ENST00000508918 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.09
LDB2-211ENST00000508918 PRXQ9BXM0 1461 aa21.83■■□□□ 1.09
LDB2-211ENST00000508918 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.08
LDB2-211ENST00000508918 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.08
LDB2-211ENST00000508918 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
LDB2-211ENST00000508918 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
LDB2-211ENST00000508918 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
LDB2-211ENST00000508918 IGF1RP08069 1367 aa21.79■■□□□ 1.08
LDB2-211ENST00000508918 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
LDB2-211ENST00000508918 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
LDB2-211ENST00000508918 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
LDB2-211ENST00000508918 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
LDB2-211ENST00000508918 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
LDB2-211ENST00000508918 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
LDB2-211ENST00000508918 CUL7Q14999 1698 aa21.67■■□□□ 1.06
LDB2-211ENST00000508918 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
LDB2-211ENST00000508918 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
LDB2-211ENST00000508918 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.05
LDB2-211ENST00000508918 CLIP1P30622 1438 aa21.57■■□□□ 1.04
LDB2-211ENST00000508918 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
LDB2-211ENST00000508918 GRIN2BQ13224 1484 aa21.53■■□□□ 1.04
LDB2-211ENST00000508918 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
LDB2-211ENST00000508918 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
LDB2-211ENST00000508918 CTTNBP2Q8WZ74 1663 aa21.46■■□□□ 1.03
LDB2-211ENST00000508918 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
LDB2-211ENST00000508918 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.02
LDB2-211ENST00000508918 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
LDB2-211ENST00000508918 VPS8Q8N3P4 1428 aa21.37■■□□□ 1.01
LDB2-211ENST00000508918 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms