RNA–Protein interactions for RNA: ENST00000508744.1

SIL1-211, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-211ENST00000508744 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
SIL1-211ENST00000508744 ABCC9O60706 1549 aa16.45■□□□□ 0.22
SIL1-211ENST00000508744 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
SIL1-211ENST00000508744 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
SIL1-211ENST00000508744 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
SIL1-211ENST00000508744 NACADO15069 1562 aa15.57■□□□□ 0.08
SIL1-211ENST00000508744 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
SIL1-211ENST00000508744 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
SIL1-211ENST00000508744 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
SIL1-211ENST00000508744 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
SIL1-211ENST00000508744 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
SIL1-211ENST00000508744 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
SIL1-211ENST00000508744 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
SIL1-211ENST00000508744 SCRIBQ14160 1630 aa15.06■□□□□ 0
SIL1-211ENST00000508744 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
SIL1-211ENST00000508744 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
SIL1-211ENST00000508744 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.04
SIL1-211ENST00000508744 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.05
SIL1-211ENST00000508744 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
SIL1-211ENST00000508744 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
SIL1-211ENST00000508744 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
SIL1-211ENST00000508744 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
SIL1-211ENST00000508744 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
SIL1-211ENST00000508744 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
SIL1-211ENST00000508744 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
SIL1-211ENST00000508744 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
SIL1-211ENST00000508744 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
SIL1-211ENST00000508744 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
SIL1-211ENST00000508744 NESP48681 1621 aa14.13□□□□□ -0.15
SIL1-211ENST00000508744 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
SIL1-211ENST00000508744 WIZO95785 1651 aa14.06□□□□□ -0.16
SIL1-211ENST00000508744 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
SIL1-211ENST00000508744 CUX2O14529 1486 aa14.05□□□□□ -0.16
SIL1-211ENST00000508744 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
SIL1-211ENST00000508744 LAMC3Q9Y6N6 1575 aa14.01□□□□□ -0.17
SIL1-211ENST00000508744 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
SIL1-211ENST00000508744 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
SIL1-211ENST00000508744 CFTRP13569 1480 aa13.85□□□□□ -0.19
SIL1-211ENST00000508744 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
SIL1-211ENST00000508744 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
SIL1-211ENST00000508744 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.19
SIL1-211ENST00000508744 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
SIL1-211ENST00000508744 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
SIL1-211ENST00000508744 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
SIL1-211ENST00000508744 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
SIL1-211ENST00000508744 WDR62O43379 1518 aa13.74□□□□□ -0.21
SIL1-211ENST00000508744 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
SIL1-211ENST00000508744 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
SIL1-211ENST00000508744 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
SIL1-211ENST00000508744 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
SIL1-211ENST00000508744 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
SIL1-211ENST00000508744 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
SIL1-211ENST00000508744 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
SIL1-211ENST00000508744 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
SIL1-211ENST00000508744 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
SIL1-211ENST00000508744 FBLN2P98095 1184 aa13.49□□□□□ -0.25
SIL1-211ENST00000508744 SOGA1O94964 1423 aa13.48□□□□□ -0.25
SIL1-211ENST00000508744 AQRO60306 1485 aaKnown RBP eCLIP13.47□□□□□ -0.25
SIL1-211ENST00000508744 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
SIL1-211ENST00000508744 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
SIL1-211ENST00000508744 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
SIL1-211ENST00000508744 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
SIL1-211ENST00000508744 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
SIL1-211ENST00000508744 CUX1P39880 1505 aa13.38□□□□□ -0.27
SIL1-211ENST00000508744 TARBP1Q13395 1621 aaKnown RBP13.36□□□□□ -0.27
SIL1-211ENST00000508744 EIF4G3O43432 1585 aaKnown RBP13.36□□□□□ -0.27
SIL1-211ENST00000508744 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
SIL1-211ENST00000508744 CYB5RLQ6IPT4 315 aa13.3□□□□□ -0.28
SIL1-211ENST00000508744 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
SIL1-211ENST00000508744 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
SIL1-211ENST00000508744 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
SIL1-211ENST00000508744 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
SIL1-211ENST00000508744 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
SIL1-211ENST00000508744 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
SIL1-211ENST00000508744 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
SIL1-211ENST00000508744 SYNJ2O15056 1496 aa13.21□□□□□ -0.3
SIL1-211ENST00000508744 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
SIL1-211ENST00000508744 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
SIL1-211ENST00000508744 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
SIL1-211ENST00000508744 CHD1O14646 1710 aa13.19□□□□□ -0.3
SIL1-211ENST00000508744 TOP2BQ02880 1626 aa13.18□□□□□ -0.3
SIL1-211ENST00000508744 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
SIL1-211ENST00000508744 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
SIL1-211ENST00000508744 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
SIL1-211ENST00000508744 FHAD1B1AJZ9 1412 aa13.12□□□□□ -0.31
SIL1-211ENST00000508744 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
SIL1-211ENST00000508744 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
SIL1-211ENST00000508744 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
SIL1-211ENST00000508744 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
SIL1-211ENST00000508744 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.31
SIL1-211ENST00000508744 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
SIL1-211ENST00000508744 ERICH3Q5RHP9 1530 aa13.06□□□□□ -0.32
SIL1-211ENST00000508744 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
SIL1-211ENST00000508744 IGF1RP08069 1367 aa13.04□□□□□ -0.32
SIL1-211ENST00000508744 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
SIL1-211ENST00000508744 NUP160Q12769 1436 aa13.02□□□□□ -0.33
SIL1-211ENST00000508744 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
SIL1-211ENST00000508744 PRG4Q92954 1404 aaPredicted RBP12.97□□□□□ -0.33
SIL1-211ENST00000508744 CARMIL1Q5VZK9 1371 aa12.97□□□□□ -0.33
SIL1-211ENST00000508744 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms