RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
SIL1-210ENST00000508639 ABCC9O60706 1549 aa23.98■■□□□ 1.43
SIL1-210ENST00000508639 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
SIL1-210ENST00000508639 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
SIL1-210ENST00000508639 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
SIL1-210ENST00000508639 NACADO15069 1562 aa22.58■■□□□ 1.2
SIL1-210ENST00000508639 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
SIL1-210ENST00000508639 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
SIL1-210ENST00000508639 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
SIL1-210ENST00000508639 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
SIL1-210ENST00000508639 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
SIL1-210ENST00000508639 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
SIL1-210ENST00000508639 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
SIL1-210ENST00000508639 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
SIL1-210ENST00000508639 SHROOM4Q9ULL8 1493 aa21.7■■□□□ 1.06
SIL1-210ENST00000508639 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
SIL1-210ENST00000508639 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
SIL1-210ENST00000508639 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
SIL1-210ENST00000508639 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
SIL1-210ENST00000508639 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
SIL1-210ENST00000508639 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
SIL1-210ENST00000508639 DNAJC5Q9H3Z4 198 aa20.73■□□□□ 0.91
SIL1-210ENST00000508639 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
SIL1-210ENST00000508639 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
SIL1-210ENST00000508639 NESP48681 1621 aa20.66■□□□□ 0.9
SIL1-210ENST00000508639 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
SIL1-210ENST00000508639 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
SIL1-210ENST00000508639 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
SIL1-210ENST00000508639 CUX2O14529 1486 aa20.59■□□□□ 0.89
SIL1-210ENST00000508639 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
SIL1-210ENST00000508639 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
SIL1-210ENST00000508639 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
SIL1-210ENST00000508639 LAMC3Q9Y6N6 1575 aa20.36■□□□□ 0.85
SIL1-210ENST00000508639 WIZO95785 1651 aa20.34■□□□□ 0.85
SIL1-210ENST00000508639 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
SIL1-210ENST00000508639 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
SIL1-210ENST00000508639 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
SIL1-210ENST00000508639 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
SIL1-210ENST00000508639 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
SIL1-210ENST00000508639 WDR62O43379 1518 aa20.07■□□□□ 0.8
SIL1-210ENST00000508639 CFTRP13569 1480 aa20.04■□□□□ 0.8
SIL1-210ENST00000508639 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
SIL1-210ENST00000508639 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
SIL1-210ENST00000508639 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
SIL1-210ENST00000508639 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
SIL1-210ENST00000508639 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
SIL1-210ENST00000508639 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
SIL1-210ENST00000508639 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
SIL1-210ENST00000508639 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
SIL1-210ENST00000508639 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
SIL1-210ENST00000508639 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
SIL1-210ENST00000508639 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
SIL1-210ENST00000508639 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
SIL1-210ENST00000508639 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
SIL1-210ENST00000508639 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
SIL1-210ENST00000508639 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
SIL1-210ENST00000508639 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
SIL1-210ENST00000508639 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
SIL1-210ENST00000508639 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
SIL1-210ENST00000508639 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
SIL1-210ENST00000508639 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
SIL1-210ENST00000508639 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
SIL1-210ENST00000508639 ARHGEF11O15085 1522 aa19.39■□□□□ 0.69
SIL1-210ENST00000508639 CHD1O14646 1710 aa19.37■□□□□ 0.69
SIL1-210ENST00000508639 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
SIL1-210ENST00000508639 SOGA1O94964 1423 aa19.34■□□□□ 0.69
SIL1-210ENST00000508639 CUX1P39880 1505 aa19.34■□□□□ 0.69
SIL1-210ENST00000508639 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
SIL1-210ENST00000508639 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
SIL1-210ENST00000508639 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SIL1-210ENST00000508639 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
SIL1-210ENST00000508639 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
SIL1-210ENST00000508639 WDR97A6NE52 1622 aa19.19■□□□□ 0.66
SIL1-210ENST00000508639 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
SIL1-210ENST00000508639 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
SIL1-210ENST00000508639 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
SIL1-210ENST00000508639 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
SIL1-210ENST00000508639 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
SIL1-210ENST00000508639 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
SIL1-210ENST00000508639 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
SIL1-210ENST00000508639 SYNJ2O15056 1496 aa19.08■□□□□ 0.64
SIL1-210ENST00000508639 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
SIL1-210ENST00000508639 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
SIL1-210ENST00000508639 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
SIL1-210ENST00000508639 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
SIL1-210ENST00000508639 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
SIL1-210ENST00000508639 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
SIL1-210ENST00000508639 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
SIL1-210ENST00000508639 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
SIL1-210ENST00000508639 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
SIL1-210ENST00000508639 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
SIL1-210ENST00000508639 ADAMTS12P58397 1594 aa18.89■□□□□ 0.62
SIL1-210ENST00000508639 NUP160Q12769 1436 aa18.89■□□□□ 0.61
SIL1-210ENST00000508639 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.61
SIL1-210ENST00000508639 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
SIL1-210ENST00000508639 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
SIL1-210ENST00000508639 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
SIL1-210ENST00000508639 IGF1RP08069 1367 aa18.68■□□□□ 0.58
SIL1-210ENST00000508639 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
SIL1-210ENST00000508639 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms