RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
NFKB1-207ENST00000508584 ABCC9O60706 1549 aa32.38■■■□□ 2.77
NFKB1-207ENST00000508584 CCDC180Q9P1Z9 1646 aa32.35■■■□□ 2.77
NFKB1-207ENST00000508584 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
NFKB1-207ENST00000508584 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
NFKB1-207ENST00000508584 NACADO15069 1562 aa30.62■■■□□ 2.49
NFKB1-207ENST00000508584 DCAF8L2P0C7V8 631 aa30.55■■■□□ 2.48
NFKB1-207ENST00000508584 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
NFKB1-207ENST00000508584 DNAJC5BQ9UF47 199 aa30.34■■■□□ 2.45
NFKB1-207ENST00000508584 MYO15BQ96JP2 1530 aa30.23■■■□□ 2.43
NFKB1-207ENST00000508584 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
NFKB1-207ENST00000508584 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
NFKB1-207ENST00000508584 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
NFKB1-207ENST00000508584 SHROOM4Q9ULL8 1493 aa29.85■■■□□ 2.37
NFKB1-207ENST00000508584 SCRIBQ14160 1630 aa29.59■■■□□ 2.33
NFKB1-207ENST00000508584 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
NFKB1-207ENST00000508584 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
NFKB1-207ENST00000508584 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
NFKB1-207ENST00000508584 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
NFKB1-207ENST00000508584 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
NFKB1-207ENST00000508584 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
NFKB1-207ENST00000508584 MROH2BQ7Z745 1585 aa28.44■■■□□ 2.14
NFKB1-207ENST00000508584 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
NFKB1-207ENST00000508584 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
NFKB1-207ENST00000508584 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
NFKB1-207ENST00000508584 WIZO95785 1651 aa28.16■■■□□ 2.1
NFKB1-207ENST00000508584 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
NFKB1-207ENST00000508584 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
NFKB1-207ENST00000508584 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
NFKB1-207ENST00000508584 ERCC6Q03468 1493 aa27.99■■■□□ 2.07
NFKB1-207ENST00000508584 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
NFKB1-207ENST00000508584 BAZ1BQ9UIG0 1483 aaKnown RBP27.93■■■□□ 2.06
NFKB1-207ENST00000508584 CUX2O14529 1486 aa27.92■■■□□ 2.06
NFKB1-207ENST00000508584 DNAJC5Q9H3Z4 198 aa27.89■■■□□ 2.06
NFKB1-207ENST00000508584 NESP48681 1621 aa27.79■■■□□ 2.04
NFKB1-207ENST00000508584 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
NFKB1-207ENST00000508584 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
NFKB1-207ENST00000508584 PDS5BQ9NTI5 1447 aa27.51■■□□□ 1.99
NFKB1-207ENST00000508584 THOC2Q8NI27 1593 aaKnown RBP27.49■■□□□ 1.99
NFKB1-207ENST00000508584 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
NFKB1-207ENST00000508584 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
NFKB1-207ENST00000508584 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
NFKB1-207ENST00000508584 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
NFKB1-207ENST00000508584 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
NFKB1-207ENST00000508584 WDR62O43379 1518 aa27.15■■□□□ 1.94
NFKB1-207ENST00000508584 CFTRP13569 1480 aa27.11■■□□□ 1.93
NFKB1-207ENST00000508584 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
NFKB1-207ENST00000508584 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
NFKB1-207ENST00000508584 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
NFKB1-207ENST00000508584 PRDM2Q13029 1718 aa26.86■■□□□ 1.89
NFKB1-207ENST00000508584 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
NFKB1-207ENST00000508584 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
NFKB1-207ENST00000508584 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
NFKB1-207ENST00000508584 OSCARQ8IYS5 282 aa26.69■■□□□ 1.86
NFKB1-207ENST00000508584 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
NFKB1-207ENST00000508584 CUX1P39880 1505 aa26.61■■□□□ 1.85
NFKB1-207ENST00000508584 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
NFKB1-207ENST00000508584 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
NFKB1-207ENST00000508584 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
NFKB1-207ENST00000508584 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
NFKB1-207ENST00000508584 DNMBPQ6XZF7 1577 aa26.49■■□□□ 1.83
NFKB1-207ENST00000508584 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
NFKB1-207ENST00000508584 SOGA1O94964 1423 aa26.39■■□□□ 1.82
NFKB1-207ENST00000508584 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
NFKB1-207ENST00000508584 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
NFKB1-207ENST00000508584 EEA1Q15075 1411 aa26.36■■□□□ 1.81
NFKB1-207ENST00000508584 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.8
NFKB1-207ENST00000508584 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
NFKB1-207ENST00000508584 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
NFKB1-207ENST00000508584 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
NFKB1-207ENST00000508584 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
NFKB1-207ENST00000508584 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
NFKB1-207ENST00000508584 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
NFKB1-207ENST00000508584 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
NFKB1-207ENST00000508584 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
NFKB1-207ENST00000508584 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
NFKB1-207ENST00000508584 ARHGEF11O15085 1522 aa26.19■■□□□ 1.78
NFKB1-207ENST00000508584 LOC105371045A0A1W2PR82 267 aa26.19■■□□□ 1.78
NFKB1-207ENST00000508584 FBLN2P98095 1184 aa26.19■■□□□ 1.78
NFKB1-207ENST00000508584 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
NFKB1-207ENST00000508584 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.78
NFKB1-207ENST00000508584 CHD1O14646 1710 aa26.12■■□□□ 1.77
NFKB1-207ENST00000508584 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
NFKB1-207ENST00000508584 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
NFKB1-207ENST00000508584 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
NFKB1-207ENST00000508584 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
NFKB1-207ENST00000508584 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
NFKB1-207ENST00000508584 GRIN2BQ13224 1484 aa26■■□□□ 1.75
NFKB1-207ENST00000508584 KIF21BO75037 1637 aa25.99■■□□□ 1.75
NFKB1-207ENST00000508584 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
NFKB1-207ENST00000508584 IGF1RP08069 1367 aa25.97■■□□□ 1.75
NFKB1-207ENST00000508584 GOLGA3Q08378 1498 aa25.97■■□□□ 1.75
NFKB1-207ENST00000508584 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
NFKB1-207ENST00000508584 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
NFKB1-207ENST00000508584 ABCA5Q8WWZ7 1642 aa25.93■■□□□ 1.74
NFKB1-207ENST00000508584 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
NFKB1-207ENST00000508584 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
NFKB1-207ENST00000508584 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
NFKB1-207ENST00000508584 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
NFKB1-207ENST00000508584 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms