RNA–Protein interactions for RNA: ENST00000508567.5

FAM200B-213, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-213ENST00000508567 NISCHQ9Y2I1 1504 aa47.6■■■■■ 5.21
FAM200B-213ENST00000508567 ABCC9O60706 1549 aa42.69■■■■■ 4.42
FAM200B-213ENST00000508567 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
FAM200B-213ENST00000508567 RB1CC1Q8TDY2 1594 aa40.55■■■■■ 4.08
FAM200B-213ENST00000508567 NACADO15069 1562 aa40.3■■■■■ 4.04
FAM200B-213ENST00000508567 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
FAM200B-213ENST00000508567 DNAJC5BQ9UF47 199 aa40.15■■■■■ 4.02
FAM200B-213ENST00000508567 PABPN1Q86U42 306 aaKnown RBP eCLIP39.85■■■■□ 3.97
FAM200B-213ENST00000508567 MYO15BQ96JP2 1530 aa39.76■■■■□ 3.96
FAM200B-213ENST00000508567 UNC13AQ9UPW8 1703 aa39.57■■■■□ 3.93
FAM200B-213ENST00000508567 ZCCHC6Q5VYS8 1495 aaKnown RBP39.43■■■■□ 3.9
FAM200B-213ENST00000508567 BICRAQ9NZM4 1560 aa39.43■■■■□ 3.9
FAM200B-213ENST00000508567 DCAF1Q9Y4B6 1507 aa39.27■■■■□ 3.88
FAM200B-213ENST00000508567 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
FAM200B-213ENST00000508567 SHROOM4Q9ULL8 1493 aa38.81■■■■□ 3.8
FAM200B-213ENST00000508567 CC2D2AQ9P2K1 1620 aa38.51■■■■□ 3.76
FAM200B-213ENST00000508567 EIF4G1Q04637 1599 aaKnown RBP38.44■■■■□ 3.74
FAM200B-213ENST00000508567 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
FAM200B-213ENST00000508567 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
FAM200B-213ENST00000508567 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
FAM200B-213ENST00000508567 SMARCA4P51532 1647 aa37.07■■■■□ 3.53
FAM200B-213ENST00000508567 SMARCA2P51531 1590 aa36.99■■■■□ 3.51
FAM200B-213ENST00000508567 HMGXB3Q12766 1538 aa36.91■■■■□ 3.5
FAM200B-213ENST00000508567 BAZ1AQ9NRL2 1556 aaPredicted RBP36.9■■■■□ 3.5
FAM200B-213ENST00000508567 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
FAM200B-213ENST00000508567 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
FAM200B-213ENST00000508567 DNAJC5Q9H3Z4 198 aa36.77■■■■□ 3.48
FAM200B-213ENST00000508567 MROH2BQ7Z745 1585 aa36.71■■■■□ 3.47
FAM200B-213ENST00000508567 PEG3Q9GZU2 1588 aa36.71■■■■□ 3.47
FAM200B-213ENST00000508567 CUX2O14529 1486 aa36.7■■■■□ 3.47
FAM200B-213ENST00000508567 NESP48681 1621 aa36.7■■■■□ 3.47
FAM200B-213ENST00000508567 LAMC3Q9Y6N6 1575 aa36.34■■■■□ 3.41
FAM200B-213ENST00000508567 WIZO95785 1651 aa36.22■■■■□ 3.39
FAM200B-213ENST00000508567 THOC2Q8NI27 1593 aaKnown RBP36.21■■■■□ 3.39
FAM200B-213ENST00000508567 PDS5BQ9NTI5 1447 aa36.19■■■■□ 3.38
FAM200B-213ENST00000508567 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
FAM200B-213ENST00000508567 KIF21AQ7Z4S6 1674 aa36.1■■■■□ 3.37
FAM200B-213ENST00000508567 RSF1Q96T23 1441 aaPredicted RBP36■■■■□ 3.35
FAM200B-213ENST00000508567 MRC2Q9UBG0 1479 aa35.86■■■■□ 3.33
FAM200B-213ENST00000508567 WDR62O43379 1518 aa35.75■■■■□ 3.31
FAM200B-213ENST00000508567 TOP2AP11388 1531 aaKnown RBP35.75■■■■□ 3.31
FAM200B-213ENST00000508567 CFTRP13569 1480 aa35.73■■■■□ 3.31
FAM200B-213ENST00000508567 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
FAM200B-213ENST00000508567 CEP164Q9UPV0 1460 aa35.72■■■■□ 3.31
FAM200B-213ENST00000508567 URB2Q14146 1524 aaKnown RBP35.44■■■■□ 3.26
FAM200B-213ENST00000508567 CCDC88BA6NC98 1476 aa35.43■■■■□ 3.26
FAM200B-213ENST00000508567 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
FAM200B-213ENST00000508567 PRDM2Q13029 1718 aa35.17■■■■□ 3.22
FAM200B-213ENST00000508567 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
FAM200B-213ENST00000508567 TOPBP1Q92547 1522 aa35.05■■■■□ 3.2
FAM200B-213ENST00000508567 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
FAM200B-213ENST00000508567 ZNF608Q9ULD9 1512 aaPredicted RBP35.02■■■■□ 3.2
FAM200B-213ENST00000508567 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
FAM200B-213ENST00000508567 DNMBPQ6XZF7 1577 aa34.87■■■■□ 3.17
FAM200B-213ENST00000508567 AQRO60306 1485 aaKnown RBP eCLIP34.73■■■■□ 3.15
FAM200B-213ENST00000508567 EIF4G3O43432 1585 aaKnown RBP34.72■■■■□ 3.15
FAM200B-213ENST00000508567 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
FAM200B-213ENST00000508567 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.14
FAM200B-213ENST00000508567 RAD54L2Q9Y4B4 1467 aa34.62■■■■□ 3.13
FAM200B-213ENST00000508567 SOGA1O94964 1423 aa34.58■■■■□ 3.13
FAM200B-213ENST00000508567 RIMBP3CA6NJZ7 1639 aa34.58■■■■□ 3.13
FAM200B-213ENST00000508567 RIMBP3BA6NNM3 1639 aa34.58■■■■□ 3.13
FAM200B-213ENST00000508567 RIMBP3Q9UFD9 1639 aa34.58■■■■□ 3.13
FAM200B-213ENST00000508567 TDRD9Q8NDG6 1382 aaKnown RBP34.54■■■■□ 3.12
FAM200B-213ENST00000508567 FBLN2P98095 1184 aa34.51■■■■□ 3.12
FAM200B-213ENST00000508567 SUPT5HO00267 1087 aaKnown RBP34.5■■■■□ 3.11
FAM200B-213ENST00000508567 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
FAM200B-213ENST00000508567 FGD5Q6ZNL6 1462 aa34.48■■■■□ 3.11
FAM200B-213ENST00000508567 CUX1P39880 1505 aa34.47■■■■□ 3.11
FAM200B-213ENST00000508567 CHD1O14646 1710 aa34.42■■■■□ 3.1
FAM200B-213ENST00000508567 CYB5RLQ6IPT4 315 aa34.35■■■■□ 3.09
FAM200B-213ENST00000508567 SNAPC4Q5SXM2 1469 aa34.32■■■■□ 3.08
FAM200B-213ENST00000508567 WDR97A6NE52 1622 aa34.26■■■■□ 3.08
FAM200B-213ENST00000508567 CHMP7Q8WUX9 453 aaPredicted RBP34.25■■■■□ 3.07
FAM200B-213ENST00000508567 GRIN2BQ13224 1484 aa34.23■■■■□ 3.07
FAM200B-213ENST00000508567 MAGI1Q96QZ7 1491 aaPredicted RBP34.2■■■■□ 3.06
FAM200B-213ENST00000508567 ARAP1Q96P48 1450 aa34.19■■■■□ 3.06
FAM200B-213ENST00000508567 GAPVD1Q14C86 1478 aa34.13■■■■□ 3.05
FAM200B-213ENST00000508567 SYNJ2O15056 1496 aa34.1■■■■□ 3.05
FAM200B-213ENST00000508567 CLASP1Q7Z460 1538 aa34.09■■■■□ 3.05
FAM200B-213ENST00000508567 ABCA10Q8WWZ4 1543 aa34.09■■■■□ 3.05
FAM200B-213ENST00000508567 SYNJ1O43426 1573 aa34.04■■■■□ 3.04
FAM200B-213ENST00000508567 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
FAM200B-213ENST00000508567 PBRM1Q86U86 1689 aa33.98■■■■□ 3.03
FAM200B-213ENST00000508567 WRNQ14191 1432 aaPredicted RBP eCLIP33.97■■■■□ 3.03
FAM200B-213ENST00000508567 TRHP20396 242 aaPredicted RBP33.93■■■■□ 3.02
FAM200B-213ENST00000508567 TOP2BQ02880 1626 aa33.87■■■■□ 3.01
FAM200B-213ENST00000508567 BIVM-ERCC5R4GMW8 1640 aa33.84■■■■□ 3.01
FAM200B-213ENST00000508567 GRIN2AQ12879 1464 aa33.78■■■■□ 3
FAM200B-213ENST00000508567 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
FAM200B-213ENST00000508567 FHAD1B1AJZ9 1412 aa33.7■■■□□ 2.98
FAM200B-213ENST00000508567 NUP160Q12769 1436 aa33.69■■■□□ 2.98
FAM200B-213ENST00000508567 CEP170Q5SW79 1584 aa33.65■■■□□ 2.98
FAM200B-213ENST00000508567 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
FAM200B-213ENST00000508567 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
FAM200B-213ENST00000508567 SHROOM2Q13796 1616 aa33.46■■■□□ 2.95
FAM200B-213ENST00000508567 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
FAM200B-213ENST00000508567 PRG4Q92954 1404 aaPredicted RBP33.38■■■□□ 2.93
FAM200B-213ENST00000508567 IGF1RP08069 1367 aa33.34■■■□□ 2.93
FAM200B-213ENST00000508567 KIF27Q86VH2 1401 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms