RNA–Protein interactions for RNA: ENST00000508566.2

RAF1P1-201, Transcript of RAF1 pseudogene 1, humanhuman

BASIC

Gene RAF1P1, Length 1,696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P1-201ENST00000508566 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
RAF1P1-201ENST00000508566 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
RAF1P1-201ENST00000508566 ABCC9O60706 1549 aa18.42■□□□□ 0.54
RAF1P1-201ENST00000508566 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
RAF1P1-201ENST00000508566 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
RAF1P1-201ENST00000508566 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
RAF1P1-201ENST00000508566 MYO15BQ96JP2 1530 aa18.15■□□□□ 0.5
RAF1P1-201ENST00000508566 NACADO15069 1562 aa18.1■□□□□ 0.49
RAF1P1-201ENST00000508566 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
RAF1P1-201ENST00000508566 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
RAF1P1-201ENST00000508566 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
RAF1P1-201ENST00000508566 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
RAF1P1-201ENST00000508566 BICRAQ9NZM4 1560 aa17.3■□□□□ 0.36
RAF1P1-201ENST00000508566 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
RAF1P1-201ENST00000508566 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
RAF1P1-201ENST00000508566 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
RAF1P1-201ENST00000508566 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
RAF1P1-201ENST00000508566 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
RAF1P1-201ENST00000508566 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
RAF1P1-201ENST00000508566 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
RAF1P1-201ENST00000508566 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
RAF1P1-201ENST00000508566 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
RAF1P1-201ENST00000508566 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
RAF1P1-201ENST00000508566 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
RAF1P1-201ENST00000508566 WIZO95785 1651 aa16.7■□□□□ 0.26
RAF1P1-201ENST00000508566 CC2D2AQ9P2K1 1620 aa16.69■□□□□ 0.26
RAF1P1-201ENST00000508566 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
RAF1P1-201ENST00000508566 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
RAF1P1-201ENST00000508566 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
RAF1P1-201ENST00000508566 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
RAF1P1-201ENST00000508566 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
RAF1P1-201ENST00000508566 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
RAF1P1-201ENST00000508566 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
RAF1P1-201ENST00000508566 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
RAF1P1-201ENST00000508566 CFTRP13569 1480 aa16.2■□□□□ 0.18
RAF1P1-201ENST00000508566 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
RAF1P1-201ENST00000508566 LAMC3Q9Y6N6 1575 aa16.18■□□□□ 0.18
RAF1P1-201ENST00000508566 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
RAF1P1-201ENST00000508566 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
RAF1P1-201ENST00000508566 NESP48681 1621 aa16.03■□□□□ 0.16
RAF1P1-201ENST00000508566 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.16
RAF1P1-201ENST00000508566 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
RAF1P1-201ENST00000508566 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
RAF1P1-201ENST00000508566 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
RAF1P1-201ENST00000508566 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
RAF1P1-201ENST00000508566 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
RAF1P1-201ENST00000508566 KIF21AQ7Z4S6 1674 aa15.87■□□□□ 0.13
RAF1P1-201ENST00000508566 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
RAF1P1-201ENST00000508566 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
RAF1P1-201ENST00000508566 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
RAF1P1-201ENST00000508566 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
RAF1P1-201ENST00000508566 CUX1P39880 1505 aa15.81■□□□□ 0.12
RAF1P1-201ENST00000508566 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
RAF1P1-201ENST00000508566 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
RAF1P1-201ENST00000508566 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
RAF1P1-201ENST00000508566 WDR62O43379 1518 aa15.75■□□□□ 0.11
RAF1P1-201ENST00000508566 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
RAF1P1-201ENST00000508566 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
RAF1P1-201ENST00000508566 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
RAF1P1-201ENST00000508566 EEA1Q15075 1411 aa15.69■□□□□ 0.1
RAF1P1-201ENST00000508566 SOGA1O94964 1423 aa15.67■□□□□ 0.1
RAF1P1-201ENST00000508566 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
RAF1P1-201ENST00000508566 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
RAF1P1-201ENST00000508566 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
RAF1P1-201ENST00000508566 CUX2O14529 1486 aa15.59■□□□□ 0.09
RAF1P1-201ENST00000508566 WDR97A6NE52 1622 aa15.58■□□□□ 0.08
RAF1P1-201ENST00000508566 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
RAF1P1-201ENST00000508566 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
RAF1P1-201ENST00000508566 FAM9AQ8IZU1 332 aaPredicted RBP15.52■□□□□ 0.08
RAF1P1-201ENST00000508566 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
RAF1P1-201ENST00000508566 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
RAF1P1-201ENST00000508566 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
RAF1P1-201ENST00000508566 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
RAF1P1-201ENST00000508566 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
RAF1P1-201ENST00000508566 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
RAF1P1-201ENST00000508566 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
RAF1P1-201ENST00000508566 CUL7Q14999 1698 aa15.42■□□□□ 0.06
RAF1P1-201ENST00000508566 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
RAF1P1-201ENST00000508566 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
RAF1P1-201ENST00000508566 IGF1RP08069 1367 aa15.42■□□□□ 0.06
RAF1P1-201ENST00000508566 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
RAF1P1-201ENST00000508566 KIF21BO75037 1637 aa15.39■□□□□ 0.05
RAF1P1-201ENST00000508566 PBRM1Q86U86 1689 aa15.39■□□□□ 0.05
RAF1P1-201ENST00000508566 CARMIL1Q5VZK9 1371 aa15.39■□□□□ 0.05
RAF1P1-201ENST00000508566 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
RAF1P1-201ENST00000508566 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
RAF1P1-201ENST00000508566 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
RAF1P1-201ENST00000508566 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
RAF1P1-201ENST00000508566 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
RAF1P1-201ENST00000508566 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
RAF1P1-201ENST00000508566 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
RAF1P1-201ENST00000508566 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
RAF1P1-201ENST00000508566 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
RAF1P1-201ENST00000508566 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
RAF1P1-201ENST00000508566 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
RAF1P1-201ENST00000508566 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
RAF1P1-201ENST00000508566 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
RAF1P1-201ENST00000508566 FBLN2P98095 1184 aa15.24■□□□□ 0.03
RAF1P1-201ENST00000508566 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
RAF1P1-201ENST00000508566 CTTNBP2Q8WZ74 1663 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms