RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
SH3TC1-215ENST00000508438 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
SH3TC1-215ENST00000508438 ABCC9O60706 1549 aa28.92■■■□□ 2.22
SH3TC1-215ENST00000508438 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
SH3TC1-215ENST00000508438 NACADO15069 1562 aa27.41■■□□□ 1.98
SH3TC1-215ENST00000508438 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
SH3TC1-215ENST00000508438 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
SH3TC1-215ENST00000508438 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
SH3TC1-215ENST00000508438 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
SH3TC1-215ENST00000508438 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.9
SH3TC1-215ENST00000508438 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
SH3TC1-215ENST00000508438 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
SH3TC1-215ENST00000508438 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
SH3TC1-215ENST00000508438 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
SH3TC1-215ENST00000508438 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
SH3TC1-215ENST00000508438 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
SH3TC1-215ENST00000508438 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
SH3TC1-215ENST00000508438 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
SH3TC1-215ENST00000508438 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
SH3TC1-215ENST00000508438 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
SH3TC1-215ENST00000508438 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
SH3TC1-215ENST00000508438 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
SH3TC1-215ENST00000508438 HMGXB3Q12766 1538 aa25.13■■□□□ 1.61
SH3TC1-215ENST00000508438 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
SH3TC1-215ENST00000508438 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
SH3TC1-215ENST00000508438 BAZ1BQ9UIG0 1483 aaKnown RBP24.99■■□□□ 1.59
SH3TC1-215ENST00000508438 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
SH3TC1-215ENST00000508438 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
SH3TC1-215ENST00000508438 NESP48681 1621 aa24.9■■□□□ 1.58
SH3TC1-215ENST00000508438 CUX2O14529 1486 aa24.88■■□□□ 1.57
SH3TC1-215ENST00000508438 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
SH3TC1-215ENST00000508438 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
SH3TC1-215ENST00000508438 WIZO95785 1651 aa24.69■■□□□ 1.54
SH3TC1-215ENST00000508438 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
SH3TC1-215ENST00000508438 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
SH3TC1-215ENST00000508438 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
SH3TC1-215ENST00000508438 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
SH3TC1-215ENST00000508438 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
SH3TC1-215ENST00000508438 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
SH3TC1-215ENST00000508438 MRC2Q9UBG0 1479 aa24.35■■□□□ 1.49
SH3TC1-215ENST00000508438 WDR62O43379 1518 aa24.3■■□□□ 1.48
SH3TC1-215ENST00000508438 CFTRP13569 1480 aa24.28■■□□□ 1.48
SH3TC1-215ENST00000508438 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
SH3TC1-215ENST00000508438 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
SH3TC1-215ENST00000508438 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
SH3TC1-215ENST00000508438 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
SH3TC1-215ENST00000508438 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
SH3TC1-215ENST00000508438 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
SH3TC1-215ENST00000508438 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
SH3TC1-215ENST00000508438 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
SH3TC1-215ENST00000508438 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
SH3TC1-215ENST00000508438 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
SH3TC1-215ENST00000508438 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
SH3TC1-215ENST00000508438 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
SH3TC1-215ENST00000508438 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
SH3TC1-215ENST00000508438 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
SH3TC1-215ENST00000508438 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
SH3TC1-215ENST00000508438 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.36
SH3TC1-215ENST00000508438 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
SH3TC1-215ENST00000508438 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
SH3TC1-215ENST00000508438 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
SH3TC1-215ENST00000508438 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
SH3TC1-215ENST00000508438 CHD1O14646 1710 aa23.46■■□□□ 1.35
SH3TC1-215ENST00000508438 CUX1P39880 1505 aa23.46■■□□□ 1.35
SH3TC1-215ENST00000508438 SOGA1O94964 1423 aa23.45■■□□□ 1.34
SH3TC1-215ENST00000508438 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
SH3TC1-215ENST00000508438 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
SH3TC1-215ENST00000508438 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
SH3TC1-215ENST00000508438 ARHGEF11O15085 1522 aa23.39■■□□□ 1.34
SH3TC1-215ENST00000508438 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
SH3TC1-215ENST00000508438 FBLN2P98095 1184 aa23.32■■□□□ 1.32
SH3TC1-215ENST00000508438 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
SH3TC1-215ENST00000508438 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
SH3TC1-215ENST00000508438 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
SH3TC1-215ENST00000508438 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
SH3TC1-215ENST00000508438 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
SH3TC1-215ENST00000508438 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
SH3TC1-215ENST00000508438 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
SH3TC1-215ENST00000508438 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
SH3TC1-215ENST00000508438 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
SH3TC1-215ENST00000508438 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
SH3TC1-215ENST00000508438 ABCA5Q8WWZ7 1642 aa23.16■■□□□ 1.3
SH3TC1-215ENST00000508438 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
SH3TC1-215ENST00000508438 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
SH3TC1-215ENST00000508438 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
SH3TC1-215ENST00000508438 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
SH3TC1-215ENST00000508438 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
SH3TC1-215ENST00000508438 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
SH3TC1-215ENST00000508438 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
SH3TC1-215ENST00000508438 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
SH3TC1-215ENST00000508438 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.26
SH3TC1-215ENST00000508438 FHAD1B1AJZ9 1412 aa22.89■■□□□ 1.25
SH3TC1-215ENST00000508438 NUP160Q12769 1436 aa22.89■■□□□ 1.25
SH3TC1-215ENST00000508438 TRHP20396 242 aaPredicted RBP22.87■■□□□ 1.25
SH3TC1-215ENST00000508438 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
SH3TC1-215ENST00000508438 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
SH3TC1-215ENST00000508438 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
SH3TC1-215ENST00000508438 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
SH3TC1-215ENST00000508438 JPH4Q96JJ6 628 aa22.62■■□□□ 1.21
SH3TC1-215ENST00000508438 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms