RNA–Protein interactions for RNA: ENST00000508434.1

C1QTNF3-204, Transcript of C1q and TNF related 3, humanhuman

TSL 2

Gene C1QTNF3, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-204ENST00000508434 NISCHQ9Y2I1 1504 aa41.8■■■■■ 4.28
C1QTNF3-204ENST00000508434 CCDC180Q9P1Z9 1646 aa37.33■■■■□ 3.57
C1QTNF3-204ENST00000508434 ABCC9O60706 1549 aa37.07■■■■□ 3.53
C1QTNF3-204ENST00000508434 RB1CC1Q8TDY2 1594 aa35.44■■■■□ 3.26
C1QTNF3-204ENST00000508434 NACADO15069 1562 aa35.3■■■■□ 3.24
C1QTNF3-204ENST00000508434 DCAF8L2P0C7V8 631 aa35.2■■■■□ 3.23
C1QTNF3-204ENST00000508434 MYO15BQ96JP2 1530 aa34.94■■■■□ 3.18
C1QTNF3-204ENST00000508434 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
C1QTNF3-204ENST00000508434 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
C1QTNF3-204ENST00000508434 DCAF1Q9Y4B6 1507 aa34.59■■■■□ 3.13
C1QTNF3-204ENST00000508434 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
C1QTNF3-204ENST00000508434 UNC13AQ9UPW8 1703 aa34.5■■■■□ 3.11
C1QTNF3-204ENST00000508434 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
C1QTNF3-204ENST00000508434 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
C1QTNF3-204ENST00000508434 SCRIBQ14160 1630 aa34■■■■□ 3.03
C1QTNF3-204ENST00000508434 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.95
C1QTNF3-204ENST00000508434 CC2D2AQ9P2K1 1620 aa33.5■■■□□ 2.95
C1QTNF3-204ENST00000508434 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
C1QTNF3-204ENST00000508434 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
C1QTNF3-204ENST00000508434 ATAD2BQ9ULI0 1458 aa32.52■■■□□ 2.8
C1QTNF3-204ENST00000508434 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
C1QTNF3-204ENST00000508434 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
C1QTNF3-204ENST00000508434 BAZ1AQ9NRL2 1556 aaPredicted RBP32.43■■■□□ 2.78
C1QTNF3-204ENST00000508434 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
C1QTNF3-204ENST00000508434 PEG3Q9GZU2 1588 aa32.23■■■□□ 2.75
C1QTNF3-204ENST00000508434 BAZ1BQ9UIG0 1483 aaKnown RBP32.2■■■□□ 2.75
C1QTNF3-204ENST00000508434 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
C1QTNF3-204ENST00000508434 ERCC6Q03468 1493 aa32.01■■■□□ 2.71
C1QTNF3-204ENST00000508434 NESP48681 1621 aa31.92■■■□□ 2.7
C1QTNF3-204ENST00000508434 CUX2O14529 1486 aa31.89■■■□□ 2.7
C1QTNF3-204ENST00000508434 LAMC3Q9Y6N6 1575 aa31.77■■■□□ 2.68
C1QTNF3-204ENST00000508434 WIZO95785 1651 aa31.77■■■□□ 2.68
C1QTNF3-204ENST00000508434 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
C1QTNF3-204ENST00000508434 PDS5BQ9NTI5 1447 aa31.65■■■□□ 2.66
C1QTNF3-204ENST00000508434 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
C1QTNF3-204ENST00000508434 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
C1QTNF3-204ENST00000508434 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.64
C1QTNF3-204ENST00000508434 KIF21AQ7Z4S6 1674 aa31.45■■■□□ 2.63
C1QTNF3-204ENST00000508434 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
C1QTNF3-204ENST00000508434 CFTRP13569 1480 aa31.32■■■□□ 2.6
C1QTNF3-204ENST00000508434 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
C1QTNF3-204ENST00000508434 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
C1QTNF3-204ENST00000508434 CEP164Q9UPV0 1460 aa31.23■■■□□ 2.59
C1QTNF3-204ENST00000508434 WDR62O43379 1518 aa31.19■■■□□ 2.58
C1QTNF3-204ENST00000508434 CCDC88BA6NC98 1476 aa31.11■■■□□ 2.57
C1QTNF3-204ENST00000508434 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
C1QTNF3-204ENST00000508434 PRDM2Q13029 1718 aa30.89■■■□□ 2.54
C1QTNF3-204ENST00000508434 ABCC8Q09428 1581 aa30.69■■■□□ 2.5
C1QTNF3-204ENST00000508434 TOPBP1Q92547 1522 aa30.66■■■□□ 2.5
C1QTNF3-204ENST00000508434 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
C1QTNF3-204ENST00000508434 DNMBPQ6XZF7 1577 aa30.56■■■□□ 2.48
C1QTNF3-204ENST00000508434 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
C1QTNF3-204ENST00000508434 ZNF608Q9ULD9 1512 aaPredicted RBP30.5■■■□□ 2.47
C1QTNF3-204ENST00000508434 SUPT5HO00267 1087 aaKnown RBP30.49■■■□□ 2.47
C1QTNF3-204ENST00000508434 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
C1QTNF3-204ENST00000508434 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
C1QTNF3-204ENST00000508434 EIF4G3O43432 1585 aaKnown RBP30.3■■■□□ 2.44
C1QTNF3-204ENST00000508434 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.44
C1QTNF3-204ENST00000508434 SOGA1O94964 1423 aa30.29■■■□□ 2.44
C1QTNF3-204ENST00000508434 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
C1QTNF3-204ENST00000508434 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
C1QTNF3-204ENST00000508434 CUX1P39880 1505 aa30.22■■■□□ 2.43
C1QTNF3-204ENST00000508434 FGD5Q6ZNL6 1462 aa30.21■■■□□ 2.43
C1QTNF3-204ENST00000508434 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
C1QTNF3-204ENST00000508434 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
C1QTNF3-204ENST00000508434 FBLN2P98095 1184 aa30.06■■■□□ 2.4
C1QTNF3-204ENST00000508434 CHD1O14646 1710 aa29.99■■■□□ 2.39
C1QTNF3-204ENST00000508434 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
C1QTNF3-204ENST00000508434 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
C1QTNF3-204ENST00000508434 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
C1QTNF3-204ENST00000508434 GRIN2BQ13224 1484 aa29.97■■■□□ 2.39
C1QTNF3-204ENST00000508434 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
C1QTNF3-204ENST00000508434 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
C1QTNF3-204ENST00000508434 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
C1QTNF3-204ENST00000508434 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
C1QTNF3-204ENST00000508434 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
C1QTNF3-204ENST00000508434 GAPVD1Q14C86 1478 aa29.89■■■□□ 2.38
C1QTNF3-204ENST00000508434 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
C1QTNF3-204ENST00000508434 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
C1QTNF3-204ENST00000508434 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
C1QTNF3-204ENST00000508434 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
C1QTNF3-204ENST00000508434 ABCA5Q8WWZ7 1642 aa29.78■■■□□ 2.36
C1QTNF3-204ENST00000508434 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
C1QTNF3-204ENST00000508434 PBRM1Q86U86 1689 aa29.76■■■□□ 2.35
C1QTNF3-204ENST00000508434 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
C1QTNF3-204ENST00000508434 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
C1QTNF3-204ENST00000508434 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
C1QTNF3-204ENST00000508434 GRIN2AQ12879 1464 aa29.56■■■□□ 2.32
C1QTNF3-204ENST00000508434 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
C1QTNF3-204ENST00000508434 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
C1QTNF3-204ENST00000508434 ADAMTS12P58397 1594 aa29.53■■■□□ 2.32
C1QTNF3-204ENST00000508434 NUP160Q12769 1436 aa29.47■■■□□ 2.31
C1QTNF3-204ENST00000508434 CEP170Q5SW79 1584 aa29.4■■■□□ 2.3
C1QTNF3-204ENST00000508434 TRHP20396 242 aaPredicted RBP29.34■■■□□ 2.29
C1QTNF3-204ENST00000508434 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
C1QTNF3-204ENST00000508434 IGF1RP08069 1367 aa29.28■■■□□ 2.28
C1QTNF3-204ENST00000508434 SHROOM2Q13796 1616 aa29.26■■■□□ 2.27
C1QTNF3-204ENST00000508434 ERCC6L2Q5T890 1561 aa29.25■■■□□ 2.27
C1QTNF3-204ENST00000508434 JPH4Q96JJ6 628 aa29.23■■■□□ 2.27
C1QTNF3-204ENST00000508434 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms