RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
SGCA-206ENST00000508382 ABCC9O60706 1549 aa31.57■■■□□ 2.64
SGCA-206ENST00000508382 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
SGCA-206ENST00000508382 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
SGCA-206ENST00000508382 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
SGCA-206ENST00000508382 PABPN1Q86U42 306 aaKnown RBP eCLIP29.23■■■□□ 2.27
SGCA-206ENST00000508382 NACADO15069 1562 aa29.22■■■□□ 2.27
SGCA-206ENST00000508382 UNC13AQ9UPW8 1703 aa29.19■■■□□ 2.26
SGCA-206ENST00000508382 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
SGCA-206ENST00000508382 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
SGCA-206ENST00000508382 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
SGCA-206ENST00000508382 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
SGCA-206ENST00000508382 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
SGCA-206ENST00000508382 DNAJC5Q9H3Z4 198 aa28.42■■■□□ 2.14
SGCA-206ENST00000508382 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
SGCA-206ENST00000508382 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
SGCA-206ENST00000508382 SCRIBQ14160 1630 aa28■■■□□ 2.07
SGCA-206ENST00000508382 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.06
SGCA-206ENST00000508382 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
SGCA-206ENST00000508382 CUX2O14529 1486 aa27.47■■□□□ 1.99
SGCA-206ENST00000508382 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
SGCA-206ENST00000508382 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
SGCA-206ENST00000508382 NESP48681 1621 aa26.94■■□□□ 1.9
SGCA-206ENST00000508382 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
SGCA-206ENST00000508382 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
SGCA-206ENST00000508382 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
SGCA-206ENST00000508382 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
SGCA-206ENST00000508382 SMARCA2P51531 1590 aa26.64■■□□□ 1.86
SGCA-206ENST00000508382 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
SGCA-206ENST00000508382 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
SGCA-206ENST00000508382 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
SGCA-206ENST00000508382 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
SGCA-206ENST00000508382 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
SGCA-206ENST00000508382 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
SGCA-206ENST00000508382 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
SGCA-206ENST00000508382 WDR62O43379 1518 aa26.22■■□□□ 1.79
SGCA-206ENST00000508382 MRC2Q9UBG0 1479 aa26.21■■□□□ 1.79
SGCA-206ENST00000508382 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
SGCA-206ENST00000508382 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
SGCA-206ENST00000508382 OSCARQ8IYS5 282 aa26.02■■□□□ 1.76
SGCA-206ENST00000508382 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
SGCA-206ENST00000508382 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
SGCA-206ENST00000508382 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
SGCA-206ENST00000508382 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
SGCA-206ENST00000508382 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
SGCA-206ENST00000508382 WIZO95785 1651 aa25.81■■□□□ 1.72
SGCA-206ENST00000508382 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
SGCA-206ENST00000508382 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
SGCA-206ENST00000508382 CFTRP13569 1480 aa25.66■■□□□ 1.7
SGCA-206ENST00000508382 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.69
SGCA-206ENST00000508382 CYB5RLQ6IPT4 315 aa25.52■■□□□ 1.68
SGCA-206ENST00000508382 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
SGCA-206ENST00000508382 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
SGCA-206ENST00000508382 TRHP20396 242 aaPredicted RBP25.44■■□□□ 1.66
SGCA-206ENST00000508382 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
SGCA-206ENST00000508382 CHD1O14646 1710 aa25.42■■□□□ 1.66
SGCA-206ENST00000508382 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
SGCA-206ENST00000508382 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
SGCA-206ENST00000508382 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
SGCA-206ENST00000508382 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
SGCA-206ENST00000508382 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
SGCA-206ENST00000508382 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.62
SGCA-206ENST00000508382 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
SGCA-206ENST00000508382 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
SGCA-206ENST00000508382 FBLN2P98095 1184 aa25.08■■□□□ 1.61
SGCA-206ENST00000508382 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
SGCA-206ENST00000508382 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
SGCA-206ENST00000508382 CLASP1Q7Z460 1538 aa25.05■■□□□ 1.6
SGCA-206ENST00000508382 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
SGCA-206ENST00000508382 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
SGCA-206ENST00000508382 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
SGCA-206ENST00000508382 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
SGCA-206ENST00000508382 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
SGCA-206ENST00000508382 SOGA1O94964 1423 aa24.78■■□□□ 1.56
SGCA-206ENST00000508382 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
SGCA-206ENST00000508382 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
SGCA-206ENST00000508382 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
SGCA-206ENST00000508382 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
SGCA-206ENST00000508382 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
SGCA-206ENST00000508382 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
SGCA-206ENST00000508382 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
SGCA-206ENST00000508382 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
SGCA-206ENST00000508382 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
SGCA-206ENST00000508382 KIF13AQ9H1H9 1805 aa24.62■■□□□ 1.53
SGCA-206ENST00000508382 CUX1P39880 1505 aa24.59■■□□□ 1.53
SGCA-206ENST00000508382 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
SGCA-206ENST00000508382 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
SGCA-206ENST00000508382 ILDR1Q86SU0 546 aaPredicted RBP24.42■■□□□ 1.5
SGCA-206ENST00000508382 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
SGCA-206ENST00000508382 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
SGCA-206ENST00000508382 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
SGCA-206ENST00000508382 NUP160Q12769 1436 aa24.35■■□□□ 1.49
SGCA-206ENST00000508382 KDM4FA0A1W2PPD8 638 aa24.33■■□□□ 1.49
SGCA-206ENST00000508382 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
SGCA-206ENST00000508382 ABCC10Q5T3U5 1492 aa24.22■■□□□ 1.47
SGCA-206ENST00000508382 DIP2BQ9P265 1576 aa24.2■■□□□ 1.47
SGCA-206ENST00000508382 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
SGCA-206ENST00000508382 KDM6BO15054 1643 aa24.17■■□□□ 1.46
SGCA-206ENST00000508382 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
SGCA-206ENST00000508382 MAPKBP1O60336 1514 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms