RNA–Protein interactions for RNA: ENST00000508323.1

GPM6A-214, Transcript of glycoprotein M6A, humanhuman

TSL 4

Gene GPM6A, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-214ENST00000508323 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
GPM6A-214ENST00000508323 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
GPM6A-214ENST00000508323 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
GPM6A-214ENST00000508323 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
GPM6A-214ENST00000508323 ABCC9O60706 1549 aa16.04■□□□□ 0.16
GPM6A-214ENST00000508323 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
GPM6A-214ENST00000508323 NACADO15069 1562 aa15.85■□□□□ 0.13
GPM6A-214ENST00000508323 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
GPM6A-214ENST00000508323 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
GPM6A-214ENST00000508323 SHROOM4Q9ULL8 1493 aa15.68■□□□□ 0.1
GPM6A-214ENST00000508323 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
GPM6A-214ENST00000508323 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
GPM6A-214ENST00000508323 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
GPM6A-214ENST00000508323 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
GPM6A-214ENST00000508323 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
GPM6A-214ENST00000508323 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
GPM6A-214ENST00000508323 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
GPM6A-214ENST00000508323 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
GPM6A-214ENST00000508323 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
GPM6A-214ENST00000508323 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
GPM6A-214ENST00000508323 WIZO95785 1651 aa14.89□□□□□ -0.03
GPM6A-214ENST00000508323 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
GPM6A-214ENST00000508323 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
GPM6A-214ENST00000508323 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
GPM6A-214ENST00000508323 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
GPM6A-214ENST00000508323 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
GPM6A-214ENST00000508323 SMARCA2P51531 1590 aa14.71□□□□□ -0.05
GPM6A-214ENST00000508323 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
GPM6A-214ENST00000508323 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
GPM6A-214ENST00000508323 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
GPM6A-214ENST00000508323 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
GPM6A-214ENST00000508323 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
GPM6A-214ENST00000508323 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
GPM6A-214ENST00000508323 CFTRP13569 1480 aa14.3□□□□□ -0.12
GPM6A-214ENST00000508323 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
GPM6A-214ENST00000508323 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
GPM6A-214ENST00000508323 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
GPM6A-214ENST00000508323 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
GPM6A-214ENST00000508323 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
GPM6A-214ENST00000508323 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
GPM6A-214ENST00000508323 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
GPM6A-214ENST00000508323 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
GPM6A-214ENST00000508323 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
GPM6A-214ENST00000508323 NESP48681 1621 aa14.1□□□□□ -0.15
GPM6A-214ENST00000508323 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
GPM6A-214ENST00000508323 CUX1P39880 1505 aa14.07□□□□□ -0.16
GPM6A-214ENST00000508323 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
GPM6A-214ENST00000508323 SOGA1O94964 1423 aa13.96□□□□□ -0.18
GPM6A-214ENST00000508323 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
GPM6A-214ENST00000508323 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
GPM6A-214ENST00000508323 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
GPM6A-214ENST00000508323 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
GPM6A-214ENST00000508323 EEA1Q15075 1411 aa13.94□□□□□ -0.18
GPM6A-214ENST00000508323 RUSC2Q8N2Y8 1516 aa13.93□□□□□ -0.18
GPM6A-214ENST00000508323 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
GPM6A-214ENST00000508323 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
GPM6A-214ENST00000508323 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
GPM6A-214ENST00000508323 LOC105371045A0A1W2PR82 267 aa13.85□□□□□ -0.19
GPM6A-214ENST00000508323 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
GPM6A-214ENST00000508323 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
GPM6A-214ENST00000508323 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
GPM6A-214ENST00000508323 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
GPM6A-214ENST00000508323 KIF21BO75037 1637 aa13.8□□□□□ -0.2
GPM6A-214ENST00000508323 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
GPM6A-214ENST00000508323 WDR62O43379 1518 aa13.8□□□□□ -0.2
GPM6A-214ENST00000508323 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
GPM6A-214ENST00000508323 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
GPM6A-214ENST00000508323 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
GPM6A-214ENST00000508323 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
GPM6A-214ENST00000508323 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
GPM6A-214ENST00000508323 CUX2O14529 1486 aa13.75□□□□□ -0.21
GPM6A-214ENST00000508323 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
GPM6A-214ENST00000508323 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
GPM6A-214ENST00000508323 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
GPM6A-214ENST00000508323 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
GPM6A-214ENST00000508323 IGF1RP08069 1367 aa13.7□□□□□ -0.22
GPM6A-214ENST00000508323 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
GPM6A-214ENST00000508323 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
GPM6A-214ENST00000508323 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
GPM6A-214ENST00000508323 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
GPM6A-214ENST00000508323 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
GPM6A-214ENST00000508323 CUL7Q14999 1698 aa13.61□□□□□ -0.23
GPM6A-214ENST00000508323 CARMIL1Q5VZK9 1371 aa13.59□□□□□ -0.23
GPM6A-214ENST00000508323 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
GPM6A-214ENST00000508323 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
GPM6A-214ENST00000508323 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
GPM6A-214ENST00000508323 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
GPM6A-214ENST00000508323 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
GPM6A-214ENST00000508323 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
GPM6A-214ENST00000508323 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
GPM6A-214ENST00000508323 GRIN2BQ13224 1484 aa13.53□□□□□ -0.24
GPM6A-214ENST00000508323 ADAMTS12P58397 1594 aa13.53□□□□□ -0.24
GPM6A-214ENST00000508323 UBTFP17480 764 aaKnown RBP13.52□□□□□ -0.25
GPM6A-214ENST00000508323 CLIP1P30622 1438 aa13.48□□□□□ -0.25
GPM6A-214ENST00000508323 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
GPM6A-214ENST00000508323 CTTNBP2Q8WZ74 1663 aa13.45□□□□□ -0.26
GPM6A-214ENST00000508323 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
GPM6A-214ENST00000508323 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
GPM6A-214ENST00000508323 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
GPM6A-214ENST00000508323 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms