RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
HTT-204ENST00000508321 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
HTT-204ENST00000508321 ABCC9O60706 1549 aa20.84■□□□□ 0.93
HTT-204ENST00000508321 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
HTT-204ENST00000508321 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
HTT-204ENST00000508321 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
HTT-204ENST00000508321 NACADO15069 1562 aa20.38■□□□□ 0.85
HTT-204ENST00000508321 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
HTT-204ENST00000508321 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
HTT-204ENST00000508321 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
HTT-204ENST00000508321 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
HTT-204ENST00000508321 SHROOM4Q9ULL8 1493 aa19.65■□□□□ 0.74
HTT-204ENST00000508321 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
HTT-204ENST00000508321 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
HTT-204ENST00000508321 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
HTT-204ENST00000508321 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
HTT-204ENST00000508321 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
HTT-204ENST00000508321 SMARCA4P51532 1647 aa19■□□□□ 0.63
HTT-204ENST00000508321 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
HTT-204ENST00000508321 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
HTT-204ENST00000508321 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
HTT-204ENST00000508321 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
HTT-204ENST00000508321 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
HTT-204ENST00000508321 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
HTT-204ENST00000508321 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
HTT-204ENST00000508321 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
HTT-204ENST00000508321 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
HTT-204ENST00000508321 WIZO95785 1651 aa18.68■□□□□ 0.58
HTT-204ENST00000508321 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
HTT-204ENST00000508321 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
HTT-204ENST00000508321 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
HTT-204ENST00000508321 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
HTT-204ENST00000508321 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
HTT-204ENST00000508321 PRDM2Q13029 1718 aa18.21■□□□□ 0.51
HTT-204ENST00000508321 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
HTT-204ENST00000508321 CFTRP13569 1480 aa18.16■□□□□ 0.5
HTT-204ENST00000508321 NESP48681 1621 aa18.11■□□□□ 0.49
HTT-204ENST00000508321 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
HTT-204ENST00000508321 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
HTT-204ENST00000508321 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
HTT-204ENST00000508321 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
HTT-204ENST00000508321 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
HTT-204ENST00000508321 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
HTT-204ENST00000508321 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
HTT-204ENST00000508321 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
HTT-204ENST00000508321 WDR62O43379 1518 aa17.86■□□□□ 0.45
HTT-204ENST00000508321 CUX2O14529 1486 aa17.85■□□□□ 0.45
HTT-204ENST00000508321 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
HTT-204ENST00000508321 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
HTT-204ENST00000508321 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
HTT-204ENST00000508321 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
HTT-204ENST00000508321 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
HTT-204ENST00000508321 CUX1P39880 1505 aa17.69■□□□□ 0.42
HTT-204ENST00000508321 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
HTT-204ENST00000508321 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
HTT-204ENST00000508321 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
HTT-204ENST00000508321 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
HTT-204ENST00000508321 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
HTT-204ENST00000508321 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
HTT-204ENST00000508321 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
HTT-204ENST00000508321 TARBP1Q13395 1621 aaKnown RBP17.55■□□□□ 0.4
HTT-204ENST00000508321 SOGA1O94964 1423 aa17.48■□□□□ 0.39
HTT-204ENST00000508321 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
HTT-204ENST00000508321 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
HTT-204ENST00000508321 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
HTT-204ENST00000508321 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
HTT-204ENST00000508321 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
HTT-204ENST00000508321 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
HTT-204ENST00000508321 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
HTT-204ENST00000508321 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
HTT-204ENST00000508321 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
HTT-204ENST00000508321 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
HTT-204ENST00000508321 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
HTT-204ENST00000508321 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
HTT-204ENST00000508321 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
HTT-204ENST00000508321 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
HTT-204ENST00000508321 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
HTT-204ENST00000508321 CUL7Q14999 1698 aa17.25■□□□□ 0.35
HTT-204ENST00000508321 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
HTT-204ENST00000508321 EEA1Q15075 1411 aa17.24■□□□□ 0.35
HTT-204ENST00000508321 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
HTT-204ENST00000508321 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
HTT-204ENST00000508321 CHD1O14646 1710 aa17.17■□□□□ 0.34
HTT-204ENST00000508321 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
HTT-204ENST00000508321 IGF1RP08069 1367 aa17.12■□□□□ 0.33
HTT-204ENST00000508321 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
HTT-204ENST00000508321 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
HTT-204ENST00000508321 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
HTT-204ENST00000508321 KIF21BO75037 1637 aa17.05■□□□□ 0.32
HTT-204ENST00000508321 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
HTT-204ENST00000508321 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
HTT-204ENST00000508321 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
HTT-204ENST00000508321 NUP160Q12769 1436 aa17.01■□□□□ 0.31
HTT-204ENST00000508321 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
HTT-204ENST00000508321 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
HTT-204ENST00000508321 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
HTT-204ENST00000508321 FBLN2P98095 1184 aa16.97■□□□□ 0.31
HTT-204ENST00000508321 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
HTT-204ENST00000508321 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
HTT-204ENST00000508321 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms