RNA–Protein interactions for RNA: ENST00000508283.5

TRIO-210, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-210ENST00000508283 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
TRIO-210ENST00000508283 ABCC9O60706 1549 aa18.96■□□□□ 0.63
TRIO-210ENST00000508283 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
TRIO-210ENST00000508283 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
TRIO-210ENST00000508283 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
TRIO-210ENST00000508283 NACADO15069 1562 aa17.85■□□□□ 0.45
TRIO-210ENST00000508283 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
TRIO-210ENST00000508283 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRIO-210ENST00000508283 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
TRIO-210ENST00000508283 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
TRIO-210ENST00000508283 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
TRIO-210ENST00000508283 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
TRIO-210ENST00000508283 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
TRIO-210ENST00000508283 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
TRIO-210ENST00000508283 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
TRIO-210ENST00000508283 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
TRIO-210ENST00000508283 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
TRIO-210ENST00000508283 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
TRIO-210ENST00000508283 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
TRIO-210ENST00000508283 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
TRIO-210ENST00000508283 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
TRIO-210ENST00000508283 CUX2O14529 1486 aa16.38■□□□□ 0.21
TRIO-210ENST00000508283 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
TRIO-210ENST00000508283 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
TRIO-210ENST00000508283 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
TRIO-210ENST00000508283 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
TRIO-210ENST00000508283 NESP48681 1621 aa16.29■□□□□ 0.2
TRIO-210ENST00000508283 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
TRIO-210ENST00000508283 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
TRIO-210ENST00000508283 PEG3Q9GZU2 1588 aa16.23■□□□□ 0.19
TRIO-210ENST00000508283 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
TRIO-210ENST00000508283 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
TRIO-210ENST00000508283 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
TRIO-210ENST00000508283 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
TRIO-210ENST00000508283 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
TRIO-210ENST00000508283 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
TRIO-210ENST00000508283 WIZO95785 1651 aa15.93■□□□□ 0.14
TRIO-210ENST00000508283 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
TRIO-210ENST00000508283 WDR62O43379 1518 aa15.86■□□□□ 0.13
TRIO-210ENST00000508283 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
TRIO-210ENST00000508283 CFTRP13569 1480 aa15.82■□□□□ 0.12
TRIO-210ENST00000508283 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
TRIO-210ENST00000508283 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
TRIO-210ENST00000508283 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
TRIO-210ENST00000508283 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
TRIO-210ENST00000508283 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
TRIO-210ENST00000508283 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
TRIO-210ENST00000508283 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
TRIO-210ENST00000508283 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
TRIO-210ENST00000508283 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
TRIO-210ENST00000508283 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
TRIO-210ENST00000508283 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
TRIO-210ENST00000508283 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
TRIO-210ENST00000508283 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
TRIO-210ENST00000508283 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
TRIO-210ENST00000508283 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
TRIO-210ENST00000508283 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
TRIO-210ENST00000508283 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIO-210ENST00000508283 TARBP1Q13395 1621 aaKnown RBP15.36■□□□□ 0.05
TRIO-210ENST00000508283 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
TRIO-210ENST00000508283 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
TRIO-210ENST00000508283 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
TRIO-210ENST00000508283 CYB5RLQ6IPT4 315 aa15.32■□□□□ 0.04
TRIO-210ENST00000508283 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
TRIO-210ENST00000508283 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
TRIO-210ENST00000508283 SOGA1O94964 1423 aa15.29■□□□□ 0.04
TRIO-210ENST00000508283 FBLN2P98095 1184 aa15.29■□□□□ 0.04
TRIO-210ENST00000508283 CHD1O14646 1710 aa15.23■□□□□ 0.03
TRIO-210ENST00000508283 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
TRIO-210ENST00000508283 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
TRIO-210ENST00000508283 CUX1P39880 1505 aa15.2■□□□□ 0.02
TRIO-210ENST00000508283 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
TRIO-210ENST00000508283 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
TRIO-210ENST00000508283 WDR97A6NE52 1622 aa15.15■□□□□ 0.02
TRIO-210ENST00000508283 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
TRIO-210ENST00000508283 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
TRIO-210ENST00000508283 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
TRIO-210ENST00000508283 CLASP1Q7Z460 1538 aa15.13■□□□□ 0.01
TRIO-210ENST00000508283 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
TRIO-210ENST00000508283 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
TRIO-210ENST00000508283 SYNJ1O43426 1573 aa15.07■□□□□ 0
TRIO-210ENST00000508283 SUPT5HO00267 1087 aaKnown RBP15.06■□□□□ 0
TRIO-210ENST00000508283 ABCA10Q8WWZ4 1543 aa15.05■□□□□ -0
TRIO-210ENST00000508283 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
TRIO-210ENST00000508283 ABCA5Q8WWZ7 1642 aa14.99□□□□□ -0.01
TRIO-210ENST00000508283 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
TRIO-210ENST00000508283 GRIN2AQ12879 1464 aa14.94□□□□□ -0.02
TRIO-210ENST00000508283 NUP160Q12769 1436 aa14.92□□□□□ -0.02
TRIO-210ENST00000508283 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
TRIO-210ENST00000508283 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
TRIO-210ENST00000508283 FHAD1B1AJZ9 1412 aa14.89□□□□□ -0.03
TRIO-210ENST00000508283 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
TRIO-210ENST00000508283 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
TRIO-210ENST00000508283 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
TRIO-210ENST00000508283 ERICH3Q5RHP9 1530 aa14.84□□□□□ -0.03
TRIO-210ENST00000508283 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
TRIO-210ENST00000508283 JPH4Q96JJ6 628 aa14.82□□□□□ -0.04
TRIO-210ENST00000508283 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
TRIO-210ENST00000508283 AEBP2Q6ZN18 517 aaPredicted RBP14.75□□□□□ -0.05
TRIO-210ENST00000508283 IGF1RP08069 1367 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms