RNA–Protein interactions for RNA: ENST00000508193.2

C12orf43-204, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-204ENST00000508193 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
C12orf43-204ENST00000508193 ABCC9O60706 1549 aa37.49■■■■□ 3.59
C12orf43-204ENST00000508193 CCDC180Q9P1Z9 1646 aa37.31■■■■□ 3.56
C12orf43-204ENST00000508193 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
C12orf43-204ENST00000508193 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
C12orf43-204ENST00000508193 NACADO15069 1562 aa35.3■■■■□ 3.24
C12orf43-204ENST00000508193 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
C12orf43-204ENST00000508193 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
C12orf43-204ENST00000508193 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
C12orf43-204ENST00000508193 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.16
C12orf43-204ENST00000508193 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
C12orf43-204ENST00000508193 ZCCHC6Q5VYS8 1495 aaKnown RBP34.38■■■■□ 3.09
C12orf43-204ENST00000508193 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
C12orf43-204ENST00000508193 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
C12orf43-204ENST00000508193 SCRIBQ14160 1630 aa34■■■■□ 3.03
C12orf43-204ENST00000508193 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
C12orf43-204ENST00000508193 CECR2Q9BXF3 1484 aa33.76■■■■□ 3
C12orf43-204ENST00000508193 EIF4G1Q04637 1599 aaKnown RBP33.75■■■□□ 2.99
C12orf43-204ENST00000508193 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
C12orf43-204ENST00000508193 DNAJC5Q9H3Z4 198 aa32.56■■■□□ 2.8
C12orf43-204ENST00000508193 ATAD2BQ9ULI0 1458 aa32.51■■■□□ 2.79
C12orf43-204ENST00000508193 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
C12orf43-204ENST00000508193 SMARCA2P51531 1590 aa32.35■■■□□ 2.77
C12orf43-204ENST00000508193 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
C12orf43-204ENST00000508193 CUX2O14529 1486 aa32.33■■■□□ 2.77
C12orf43-204ENST00000508193 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
C12orf43-204ENST00000508193 NESP48681 1621 aa32.21■■■□□ 2.75
C12orf43-204ENST00000508193 BAZ1AQ9NRL2 1556 aaPredicted RBP32.19■■■□□ 2.74
C12orf43-204ENST00000508193 PEG3Q9GZU2 1588 aa32.13■■■□□ 2.73
C12orf43-204ENST00000508193 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
C12orf43-204ENST00000508193 MROH2BQ7Z745 1585 aa32.03■■■□□ 2.72
C12orf43-204ENST00000508193 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
C12orf43-204ENST00000508193 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
C12orf43-204ENST00000508193 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
C12orf43-204ENST00000508193 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
C12orf43-204ENST00000508193 WIZO95785 1651 aa31.65■■■□□ 2.66
C12orf43-204ENST00000508193 CADPSQ9ULU8 1353 aa31.59■■■□□ 2.65
C12orf43-204ENST00000508193 MRC2Q9UBG0 1479 aa31.43■■■□□ 2.62
C12orf43-204ENST00000508193 WDR62O43379 1518 aa31.39■■■□□ 2.62
C12orf43-204ENST00000508193 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
C12orf43-204ENST00000508193 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.59
C12orf43-204ENST00000508193 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
C12orf43-204ENST00000508193 CFTRP13569 1480 aa31.22■■■□□ 2.59
C12orf43-204ENST00000508193 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
C12orf43-204ENST00000508193 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
C12orf43-204ENST00000508193 TRIM41Q8WV44 630 aa31.01■■■□□ 2.55
C12orf43-204ENST00000508193 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
C12orf43-204ENST00000508193 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
C12orf43-204ENST00000508193 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
C12orf43-204ENST00000508193 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
C12orf43-204ENST00000508193 TOPBP1Q92547 1522 aa30.65■■■□□ 2.5
C12orf43-204ENST00000508193 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
C12orf43-204ENST00000508193 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.48
C12orf43-204ENST00000508193 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.48
C12orf43-204ENST00000508193 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.48
C12orf43-204ENST00000508193 DNMBPQ6XZF7 1577 aa30.5■■■□□ 2.47
C12orf43-204ENST00000508193 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
C12orf43-204ENST00000508193 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
C12orf43-204ENST00000508193 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
C12orf43-204ENST00000508193 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.452e-6■■■■■ 26.8
C12orf43-204ENST00000508193 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
C12orf43-204ENST00000508193 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
C12orf43-204ENST00000508193 CHD1O14646 1710 aa30.33■■■□□ 2.45
C12orf43-204ENST00000508193 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
C12orf43-204ENST00000508193 SOGA1O94964 1423 aa30.16■■■□□ 2.42
C12orf43-204ENST00000508193 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
C12orf43-204ENST00000508193 CYB5RLQ6IPT4 315 aa30.14■■■□□ 2.42
C12orf43-204ENST00000508193 FBLN2P98095 1184 aa30.12■■■□□ 2.41
C12orf43-204ENST00000508193 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
C12orf43-204ENST00000508193 CUX1P39880 1505 aa30.09■■■□□ 2.41
C12orf43-204ENST00000508193 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
C12orf43-204ENST00000508193 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
C12orf43-204ENST00000508193 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
C12orf43-204ENST00000508193 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
C12orf43-204ENST00000508193 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
C12orf43-204ENST00000508193 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
C12orf43-204ENST00000508193 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
C12orf43-204ENST00000508193 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
C12orf43-204ENST00000508193 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
C12orf43-204ENST00000508193 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
C12orf43-204ENST00000508193 TRHP20396 242 aaPredicted RBP29.79■■■□□ 2.36
C12orf43-204ENST00000508193 GAPVD1Q14C86 1478 aa29.79■■■□□ 2.36
C12orf43-204ENST00000508193 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.35
C12orf43-204ENST00000508193 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
C12orf43-204ENST00000508193 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
C12orf43-204ENST00000508193 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
C12orf43-204ENST00000508193 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
C12orf43-204ENST00000508193 GRIN2AQ12879 1464 aa29.54■■■□□ 2.32
C12orf43-204ENST00000508193 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
C12orf43-204ENST00000508193 ERCC6L2Q5T890 1561 aa29.53■■■□□ 2.32
C12orf43-204ENST00000508193 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
C12orf43-204ENST00000508193 CEP170Q5SW79 1584 aa29.49■■■□□ 2.31
C12orf43-204ENST00000508193 NUP160Q12769 1436 aa29.46■■■□□ 2.31
C12orf43-204ENST00000508193 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
C12orf43-204ENST00000508193 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
C12orf43-204ENST00000508193 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
C12orf43-204ENST00000508193 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
C12orf43-204ENST00000508193 JPH4Q96JJ6 628 aa29.15■■■□□ 2.26
C12orf43-204ENST00000508193 KIF13AQ9H1H9 1805 aa29.12■■■□□ 2.25
C12orf43-204ENST00000508193 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms