RNA–Protein interactions for RNA: ENST00000508030.5

PDK2-209, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 4

Gene PDK2, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-209ENST00000508030 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
PDK2-209ENST00000508030 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
PDK2-209ENST00000508030 ABCC9O60706 1549 aa27.88■■■□□ 2.05
PDK2-209ENST00000508030 RB1CC1Q8TDY2 1594 aa26.65■■□□□ 1.86
PDK2-209ENST00000508030 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
PDK2-209ENST00000508030 NACADO15069 1562 aa26.55■■□□□ 1.84
PDK2-209ENST00000508030 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
PDK2-209ENST00000508030 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
PDK2-209ENST00000508030 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
PDK2-209ENST00000508030 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
PDK2-209ENST00000508030 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
PDK2-209ENST00000508030 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
PDK2-209ENST00000508030 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
PDK2-209ENST00000508030 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
PDK2-209ENST00000508030 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
PDK2-209ENST00000508030 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
PDK2-209ENST00000508030 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
PDK2-209ENST00000508030 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
PDK2-209ENST00000508030 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
PDK2-209ENST00000508030 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
PDK2-209ENST00000508030 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
PDK2-209ENST00000508030 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
PDK2-209ENST00000508030 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
PDK2-209ENST00000508030 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
PDK2-209ENST00000508030 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
PDK2-209ENST00000508030 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.48
PDK2-209ENST00000508030 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
PDK2-209ENST00000508030 WIZO95785 1651 aa24.13■■□□□ 1.45
PDK2-209ENST00000508030 NESP48681 1621 aa24.07■■□□□ 1.44
PDK2-209ENST00000508030 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
PDK2-209ENST00000508030 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
PDK2-209ENST00000508030 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
PDK2-209ENST00000508030 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
PDK2-209ENST00000508030 CUX2O14529 1486 aa23.82■■□□□ 1.4
PDK2-209ENST00000508030 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
PDK2-209ENST00000508030 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
PDK2-209ENST00000508030 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
PDK2-209ENST00000508030 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
PDK2-209ENST00000508030 CFTRP13569 1480 aa23.62■■□□□ 1.37
PDK2-209ENST00000508030 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
PDK2-209ENST00000508030 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
PDK2-209ENST00000508030 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
PDK2-209ENST00000508030 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
PDK2-209ENST00000508030 WDR62O43379 1518 aa23.48■■□□□ 1.35
PDK2-209ENST00000508030 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
PDK2-209ENST00000508030 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
PDK2-209ENST00000508030 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
PDK2-209ENST00000508030 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
PDK2-209ENST00000508030 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
PDK2-209ENST00000508030 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
PDK2-209ENST00000508030 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
PDK2-209ENST00000508030 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
PDK2-209ENST00000508030 ZNF608Q9ULD9 1512 aaPredicted RBP23.01■■□□□ 1.27
PDK2-209ENST00000508030 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
PDK2-209ENST00000508030 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
PDK2-209ENST00000508030 CUX1P39880 1505 aa22.91■■□□□ 1.26
PDK2-209ENST00000508030 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.25
PDK2-209ENST00000508030 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
PDK2-209ENST00000508030 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
PDK2-209ENST00000508030 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDK2-209ENST00000508030 SOGA1O94964 1423 aa22.83■■□□□ 1.25
PDK2-209ENST00000508030 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
PDK2-209ENST00000508030 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
PDK2-209ENST00000508030 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
PDK2-209ENST00000508030 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
PDK2-209ENST00000508030 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
PDK2-209ENST00000508030 CHD1O14646 1710 aa22.63■■□□□ 1.21
PDK2-209ENST00000508030 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
PDK2-209ENST00000508030 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
PDK2-209ENST00000508030 FBLN2P98095 1184 aa22.62■■□□□ 1.21
PDK2-209ENST00000508030 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
PDK2-209ENST00000508030 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
PDK2-209ENST00000508030 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
PDK2-209ENST00000508030 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
PDK2-209ENST00000508030 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
PDK2-209ENST00000508030 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
PDK2-209ENST00000508030 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
PDK2-209ENST00000508030 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
PDK2-209ENST00000508030 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
PDK2-209ENST00000508030 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
PDK2-209ENST00000508030 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
PDK2-209ENST00000508030 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
PDK2-209ENST00000508030 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
PDK2-209ENST00000508030 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
PDK2-209ENST00000508030 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
PDK2-209ENST00000508030 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
PDK2-209ENST00000508030 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
PDK2-209ENST00000508030 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
PDK2-209ENST00000508030 FHAD1B1AJZ9 1412 aa22.29■■□□□ 1.16
PDK2-209ENST00000508030 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
PDK2-209ENST00000508030 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
PDK2-209ENST00000508030 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
PDK2-209ENST00000508030 NUP160Q12769 1436 aa22.22■■□□□ 1.15
PDK2-209ENST00000508030 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
PDK2-209ENST00000508030 IGF1RP08069 1367 aa22.13■■□□□ 1.13
PDK2-209ENST00000508030 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
PDK2-209ENST00000508030 CUL7Q14999 1698 aa22.07■■□□□ 1.12
PDK2-209ENST00000508030 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
PDK2-209ENST00000508030 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
PDK2-209ENST00000508030 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms