RNA–Protein interactions for RNA: ENST00000508029.5

NSD1-208, Transcript of nuclear receptor binding SET domain protein 1, humanhuman

TSL 2

Gene NSD1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD1-208ENST00000508029 NISCHQ9Y2I1 1504 aa38.41■■■■□ 3.74
NSD1-208ENST00000508029 CCDC180Q9P1Z9 1646 aa34.4■■■■□ 3.1
NSD1-208ENST00000508029 ABCC9O60706 1549 aa33.89■■■■□ 3.02
NSD1-208ENST00000508029 RB1CC1Q8TDY2 1594 aa32.52■■■□□ 2.8
NSD1-208ENST00000508029 NACADO15069 1562 aa32.41■■■□□ 2.78
NSD1-208ENST00000508029 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
NSD1-208ENST00000508029 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
NSD1-208ENST00000508029 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
NSD1-208ENST00000508029 UNC13AQ9UPW8 1703 aa31.84■■■□□ 2.69
NSD1-208ENST00000508029 DCAF1Q9Y4B6 1507 aa31.82■■■□□ 2.68
NSD1-208ENST00000508029 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
NSD1-208ENST00000508029 BICRAQ9NZM4 1560 aa31.54■■■□□ 2.64
NSD1-208ENST00000508029 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
NSD1-208ENST00000508029 SCRIBQ14160 1630 aa31.23■■■□□ 2.59
NSD1-208ENST00000508029 SHROOM4Q9ULL8 1493 aa31.22■■■□□ 2.59
NSD1-208ENST00000508029 EIF4G1Q04637 1599 aaKnown RBP30.73■■■□□ 2.51
NSD1-208ENST00000508029 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
NSD1-208ENST00000508029 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
NSD1-208ENST00000508029 SMARCA4P51532 1647 aa29.89■■■□□ 2.38
NSD1-208ENST00000508029 NCAPD3P42695 1498 aa29.89■■■□□ 2.38
NSD1-208ENST00000508029 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
NSD1-208ENST00000508029 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
NSD1-208ENST00000508029 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
NSD1-208ENST00000508029 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
NSD1-208ENST00000508029 PEG3Q9GZU2 1588 aa29.65■■■□□ 2.34
NSD1-208ENST00000508029 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
NSD1-208ENST00000508029 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
NSD1-208ENST00000508029 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
NSD1-208ENST00000508029 WIZO95785 1651 aa29.25■■■□□ 2.27
NSD1-208ENST00000508029 NESP48681 1621 aa29.22■■■□□ 2.27
NSD1-208ENST00000508029 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
NSD1-208ENST00000508029 CUX2O14529 1486 aa29.16■■■□□ 2.26
NSD1-208ENST00000508029 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
NSD1-208ENST00000508029 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
NSD1-208ENST00000508029 PDS5BQ9NTI5 1447 aa28.96■■■□□ 2.23
NSD1-208ENST00000508029 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
NSD1-208ENST00000508029 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
NSD1-208ENST00000508029 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
NSD1-208ENST00000508029 CFTRP13569 1480 aa28.72■■■□□ 2.19
NSD1-208ENST00000508029 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
NSD1-208ENST00000508029 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
NSD1-208ENST00000508029 FANCD2Q9BXW9 1451 aa28.62■■■□□ 2.17
NSD1-208ENST00000508029 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
NSD1-208ENST00000508029 WDR62O43379 1518 aa28.62■■■□□ 2.17
NSD1-208ENST00000508029 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
NSD1-208ENST00000508029 CCDC88BA6NC98 1476 aa28.56■■■□□ 2.16
NSD1-208ENST00000508029 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
NSD1-208ENST00000508029 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
NSD1-208ENST00000508029 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
NSD1-208ENST00000508029 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
NSD1-208ENST00000508029 IFT140Q96RY7 1462 aa28.06■■■□□ 2.08
NSD1-208ENST00000508029 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
NSD1-208ENST00000508029 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
NSD1-208ENST00000508029 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.05
NSD1-208ENST00000508029 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
NSD1-208ENST00000508029 OSCARQ8IYS5 282 aa27.85■■■□□ 2.05
NSD1-208ENST00000508029 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
NSD1-208ENST00000508029 CUX1P39880 1505 aa27.76■■■□□ 2.03
NSD1-208ENST00000508029 SOGA1O94964 1423 aa27.74■■■□□ 2.03
NSD1-208ENST00000508029 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
NSD1-208ENST00000508029 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.03
NSD1-208ENST00000508029 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
NSD1-208ENST00000508029 WDR97A6NE52 1622 aa27.69■■■□□ 2.02
NSD1-208ENST00000508029 CHD1O14646 1710 aa27.6■■■□□ 2.01
NSD1-208ENST00000508029 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
NSD1-208ENST00000508029 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
NSD1-208ENST00000508029 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
NSD1-208ENST00000508029 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
NSD1-208ENST00000508029 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
NSD1-208ENST00000508029 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
NSD1-208ENST00000508029 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
NSD1-208ENST00000508029 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
NSD1-208ENST00000508029 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
NSD1-208ENST00000508029 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
NSD1-208ENST00000508029 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.99
NSD1-208ENST00000508029 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
NSD1-208ENST00000508029 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
NSD1-208ENST00000508029 FBLN2P98095 1184 aa27.42■■□□□ 1.98
NSD1-208ENST00000508029 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
NSD1-208ENST00000508029 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
NSD1-208ENST00000508029 ARHGEF11O15085 1522 aa27.39■■□□□ 1.98
NSD1-208ENST00000508029 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
NSD1-208ENST00000508029 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
NSD1-208ENST00000508029 CHMP7Q8WUX9 453 aaPredicted RBP27.33■■□□□ 1.97
NSD1-208ENST00000508029 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
NSD1-208ENST00000508029 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
NSD1-208ENST00000508029 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
NSD1-208ENST00000508029 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
NSD1-208ENST00000508029 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
NSD1-208ENST00000508029 GRIN2AQ12879 1464 aa27.11■■□□□ 1.93
NSD1-208ENST00000508029 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
NSD1-208ENST00000508029 NUP160Q12769 1436 aa27.02■■□□□ 1.92
NSD1-208ENST00000508029 CEP170Q5SW79 1584 aa26.99■■□□□ 1.91
NSD1-208ENST00000508029 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
NSD1-208ENST00000508029 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
NSD1-208ENST00000508029 IGF1RP08069 1367 aa26.84■■□□□ 1.89
NSD1-208ENST00000508029 CUL7Q14999 1698 aa26.83■■□□□ 1.89
NSD1-208ENST00000508029 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
NSD1-208ENST00000508029 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
NSD1-208ENST00000508029 JPH4Q96JJ6 628 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms