RNA–Protein interactions for RNA: ENST00000507992.5

FAM200B-212, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-212ENST00000507992 NISCHQ9Y2I1 1504 aa48.65■■■■■ 5.38
FAM200B-212ENST00000507992 ABCC9O60706 1549 aa44.7■■■■■ 4.75
FAM200B-212ENST00000507992 CCDC180Q9P1Z9 1646 aa44.04■■■■■ 4.64
FAM200B-212ENST00000507992 DNAJC5BQ9UF47 199 aa42.61■■■■■ 4.41
FAM200B-212ENST00000507992 RB1CC1Q8TDY2 1594 aa42.21■■■■■ 4.35
FAM200B-212ENST00000507992 NACADO15069 1562 aa41.73■■■■■ 4.27
FAM200B-212ENST00000507992 UNC13AQ9UPW8 1703 aa41.47■■■■■ 4.23
FAM200B-212ENST00000507992 PABPN1Q86U42 306 aaKnown RBP eCLIP41.45■■■■■ 4.23
FAM200B-212ENST00000507992 DCAF8L2P0C7V8 631 aa41.24■■■■■ 4.19
FAM200B-212ENST00000507992 BICRAQ9NZM4 1560 aa41.12■■■■■ 4.17
FAM200B-212ENST00000507992 MYO15BQ96JP2 1530 aa40.89■■■■■ 4.14
FAM200B-212ENST00000507992 CC2D2AQ9P2K1 1620 aa40.4■■■■■ 4.06
FAM200B-212ENST00000507992 SHROOM4Q9ULL8 1493 aa40.33■■■■■ 4.05
FAM200B-212ENST00000507992 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
FAM200B-212ENST00000507992 ZCCHC6Q5VYS8 1495 aaKnown RBP40.19■■■■■ 4.02
FAM200B-212ENST00000507992 DCAF1Q9Y4B6 1507 aa40.12■■■■■ 4.01
FAM200B-212ENST00000507992 EIF4G1Q04637 1599 aaKnown RBP40.11■■■■■ 4.01
FAM200B-212ENST00000507992 SCRIBQ14160 1630 aa40.09■■■■■ 4.01
FAM200B-212ENST00000507992 DNAJC5Q9H3Z4 198 aa39.57■■■■□ 3.93
FAM200B-212ENST00000507992 CUX2O14529 1486 aa38.79■■■■□ 3.8
FAM200B-212ENST00000507992 ERCC6Q03468 1493 aa38.58■■■■□ 3.77
FAM200B-212ENST00000507992 NCAPD3P42695 1498 aa38.52■■■■□ 3.76
FAM200B-212ENST00000507992 ATAD2BQ9ULI0 1458 aa38.33■■■■□ 3.73
FAM200B-212ENST00000507992 NESP48681 1621 aa38.24■■■■□ 3.71
FAM200B-212ENST00000507992 HMGXB3Q12766 1538 aa38.21■■■■□ 3.71
FAM200B-212ENST00000507992 SMARCA4P51532 1647 aa38.16■■■■□ 3.7
FAM200B-212ENST00000507992 SMARCA2P51531 1590 aa38.15■■■■□ 3.7
FAM200B-212ENST00000507992 THOC2Q8NI27 1593 aaKnown RBP38.05■■■■□ 3.68
FAM200B-212ENST00000507992 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
FAM200B-212ENST00000507992 KIF21AQ7Z4S6 1674 aa37.8■■■■□ 3.64
FAM200B-212ENST00000507992 LAMC3Q9Y6N6 1575 aa37.8■■■■□ 3.64
FAM200B-212ENST00000507992 BAZ1AQ9NRL2 1556 aaPredicted RBP37.79■■■■□ 3.64
FAM200B-212ENST00000507992 PEG3Q9GZU2 1588 aa37.78■■■■□ 3.64
FAM200B-212ENST00000507992 TRIM41Q8WV44 630 aa37.53■■■■□ 3.6
FAM200B-212ENST00000507992 PDS5BQ9NTI5 1447 aa37.52■■■■□ 3.6
FAM200B-212ENST00000507992 MROH2BQ7Z745 1585 aa37.51■■■■□ 3.6
FAM200B-212ENST00000507992 MRC2Q9UBG0 1479 aa37.32■■■■□ 3.56
FAM200B-212ENST00000507992 WDR62O43379 1518 aa37.3■■■■□ 3.56
FAM200B-212ENST00000507992 CADPSQ9ULU8 1353 aa37.28■■■■□ 3.56
FAM200B-212ENST00000507992 WIZO95785 1651 aa37.09■■■■□ 3.53
FAM200B-212ENST00000507992 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.51
FAM200B-212ENST00000507992 FANCD2Q9BXW9 1451 aa36.9■■■■□ 3.5
FAM200B-212ENST00000507992 OSCARQ8IYS5 282 aa36.8■■■■□ 3.48
FAM200B-212ENST00000507992 CFTRP13569 1480 aa36.75■■■■□ 3.47
FAM200B-212ENST00000507992 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.47
FAM200B-212ENST00000507992 RIMBP3CA6NJZ7 1639 aa36.6■■■■□ 3.45
FAM200B-212ENST00000507992 RIMBP3BA6NNM3 1639 aa36.6■■■■□ 3.45
FAM200B-212ENST00000507992 RIMBP3Q9UFD9 1639 aa36.6■■■■□ 3.45
FAM200B-212ENST00000507992 TOP2AP11388 1531 aaKnown RBP36.49■■■■□ 3.43
FAM200B-212ENST00000507992 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
FAM200B-212ENST00000507992 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
FAM200B-212ENST00000507992 ZNF608Q9ULD9 1512 aaPredicted RBP36.37■■■■□ 3.41
FAM200B-212ENST00000507992 ARHGEF11O15085 1522 aa36.36■■■■□ 3.41
FAM200B-212ENST00000507992 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
FAM200B-212ENST00000507992 EIF4G3O43432 1585 aaKnown RBP36.17■■■■□ 3.38
FAM200B-212ENST00000507992 TOPBP1Q92547 1522 aa36.15■■■■□ 3.38
FAM200B-212ENST00000507992 CHD1O14646 1710 aa36.1■■■■□ 3.37
FAM200B-212ENST00000507992 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
FAM200B-212ENST00000507992 CYB5RLQ6IPT4 315 aa36.03■■■■□ 3.36
FAM200B-212ENST00000507992 ARAP1Q96P48 1450 aa35.97■■■■□ 3.35
FAM200B-212ENST00000507992 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
FAM200B-212ENST00000507992 TARBP1Q13395 1621 aaKnown RBP35.95■■■■□ 3.35
FAM200B-212ENST00000507992 ABCC8Q09428 1581 aa35.93■■■■□ 3.34
FAM200B-212ENST00000507992 AQRO60306 1485 aaKnown RBP eCLIP35.9■■■■□ 3.34
FAM200B-212ENST00000507992 TRHP20396 242 aaPredicted RBP35.83■■■■□ 3.33
FAM200B-212ENST00000507992 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
FAM200B-212ENST00000507992 FBLN2P98095 1184 aa35.71■■■■□ 3.31
FAM200B-212ENST00000507992 RAD54L2Q9Y4B4 1467 aa35.63■■■■□ 3.29
FAM200B-212ENST00000507992 CLASP1Q7Z460 1538 aa35.6■■■■□ 3.29
FAM200B-212ENST00000507992 TDRD9Q8NDG6 1382 aaKnown RBP35.53■■■■□ 3.28
FAM200B-212ENST00000507992 SNAPC4Q5SXM2 1469 aa35.53■■■■□ 3.28
FAM200B-212ENST00000507992 SOGA1O94964 1423 aa35.49■■■■□ 3.27
FAM200B-212ENST00000507992 WDR97A6NE52 1622 aa35.45■■■■□ 3.27
FAM200B-212ENST00000507992 SYNJ1O43426 1573 aa35.44■■■■□ 3.26
FAM200B-212ENST00000507992 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
FAM200B-212ENST00000507992 MAGI1Q96QZ7 1491 aaPredicted RBP35.36■■■■□ 3.25
FAM200B-212ENST00000507992 CHMP7Q8WUX9 453 aaPredicted RBP35.32■■■■□ 3.24
FAM200B-212ENST00000507992 CUX1P39880 1505 aa35.29■■■■□ 3.24
FAM200B-212ENST00000507992 AEBP2Q6ZN18 517 aaPredicted RBP35.29■■■■□ 3.24
FAM200B-212ENST00000507992 GRIN2BQ13224 1484 aa35.29■■■■□ 3.24
FAM200B-212ENST00000507992 SYNJ2O15056 1496 aa35.27■■■■□ 3.24
FAM200B-212ENST00000507992 PBRM1Q86U86 1689 aa35.25■■■■□ 3.23
FAM200B-212ENST00000507992 GAPVD1Q14C86 1478 aa35.19■■■■□ 3.22
FAM200B-212ENST00000507992 ABCA5Q8WWZ7 1642 aa35.04■■■■□ 3.2
FAM200B-212ENST00000507992 ERCC6L2Q5T890 1561 aa35.04■■■■□ 3.2
FAM200B-212ENST00000507992 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
FAM200B-212ENST00000507992 GRIN2AQ12879 1464 aa34.87■■■■□ 3.17
FAM200B-212ENST00000507992 CEP170Q5SW79 1584 aa34.85■■■■□ 3.17
FAM200B-212ENST00000507992 ADAMTS12P58397 1594 aa34.82■■■■□ 3.16
FAM200B-212ENST00000507992 KIF13AQ9H1H9 1805 aa34.81■■■■□ 3.16
FAM200B-212ENST00000507992 SHROOM2Q13796 1616 aa34.79■■■■□ 3.16
FAM200B-212ENST00000507992 NUP160Q12769 1436 aa34.78■■■■□ 3.16
FAM200B-212ENST00000507992 WRNQ14191 1432 aaPredicted RBP eCLIP34.58■■■■□ 3.13
FAM200B-212ENST00000507992 FHAD1B1AJZ9 1412 aa34.57■■■■□ 3.13
FAM200B-212ENST00000507992 BIVM-ERCC5R4GMW8 1640 aa34.57■■■■□ 3.12
FAM200B-212ENST00000507992 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
FAM200B-212ENST00000507992 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
FAM200B-212ENST00000507992 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
FAM200B-212ENST00000507992 ABCC10Q5T3U5 1492 aa34.37■■■■□ 3.09
FAM200B-212ENST00000507992 RUSC2Q8N2Y8 1516 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms