RNA–Protein interactions for RNA: ENST00000507951.5

ESRRB-203, Transcript of estrogen related receptor beta, humanhuman

TSL 3

Gene ESRRB, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-203ENST00000507951 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
ESRRB-203ENST00000507951 ABCC9O60706 1549 aa32.96■■■□□ 2.87
ESRRB-203ENST00000507951 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
ESRRB-203ENST00000507951 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
ESRRB-203ENST00000507951 NACADO15069 1562 aa31■■■□□ 2.55
ESRRB-203ENST00000507951 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
ESRRB-203ENST00000507951 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
ESRRB-203ENST00000507951 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
ESRRB-203ENST00000507951 PABPN1Q86U42 306 aaKnown RBP eCLIP30.62■■■□□ 2.49
ESRRB-203ENST00000507951 MYO15BQ96JP2 1530 aa30.51■■■□□ 2.47
ESRRB-203ENST00000507951 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
ESRRB-203ENST00000507951 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
ESRRB-203ENST00000507951 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
ESRRB-203ENST00000507951 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
ESRRB-203ENST00000507951 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
ESRRB-203ENST00000507951 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
ESRRB-203ENST00000507951 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
ESRRB-203ENST00000507951 CECR2Q9BXF3 1484 aa29.63■■■□□ 2.33
ESRRB-203ENST00000507951 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
ESRRB-203ENST00000507951 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
ESRRB-203ENST00000507951 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
ESRRB-203ENST00000507951 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
ESRRB-203ENST00000507951 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
ESRRB-203ENST00000507951 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
ESRRB-203ENST00000507951 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
ESRRB-203ENST00000507951 NESP48681 1621 aa28.35■■■□□ 2.13
ESRRB-203ENST00000507951 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
ESRRB-203ENST00000507951 CUX2O14529 1486 aa28.31■■■□□ 2.12
ESRRB-203ENST00000507951 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
ESRRB-203ENST00000507951 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
ESRRB-203ENST00000507951 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
ESRRB-203ENST00000507951 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
ESRRB-203ENST00000507951 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
ESRRB-203ENST00000507951 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
ESRRB-203ENST00000507951 WIZO95785 1651 aa27.97■■■□□ 2.07
ESRRB-203ENST00000507951 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.04
ESRRB-203ENST00000507951 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
ESRRB-203ENST00000507951 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
ESRRB-203ENST00000507951 WDR62O43379 1518 aa27.61■■■□□ 2.01
ESRRB-203ENST00000507951 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
ESRRB-203ENST00000507951 TOP2AP11388 1531 aaKnown RBP27.51■■■□□ 2
ESRRB-203ENST00000507951 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
ESRRB-203ENST00000507951 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
ESRRB-203ENST00000507951 CFTRP13569 1480 aa27.44■■□□□ 1.98
ESRRB-203ENST00000507951 URB2Q14146 1524 aaKnown RBP27.33■■□□□ 1.97
ESRRB-203ENST00000507951 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
ESRRB-203ENST00000507951 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
ESRRB-203ENST00000507951 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
ESRRB-203ENST00000507951 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
ESRRB-203ENST00000507951 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
ESRRB-203ENST00000507951 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
ESRRB-203ENST00000507951 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
ESRRB-203ENST00000507951 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
ESRRB-203ENST00000507951 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
ESRRB-203ENST00000507951 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
ESRRB-203ENST00000507951 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
ESRRB-203ENST00000507951 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
ESRRB-203ENST00000507951 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
ESRRB-203ENST00000507951 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
ESRRB-203ENST00000507951 CHD1O14646 1710 aa26.75■■□□□ 1.87
ESRRB-203ENST00000507951 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.87
ESRRB-203ENST00000507951 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
ESRRB-203ENST00000507951 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
ESRRB-203ENST00000507951 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
ESRRB-203ENST00000507951 CUX1P39880 1505 aa26.55■■□□□ 1.84
ESRRB-203ENST00000507951 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
ESRRB-203ENST00000507951 SOGA1O94964 1423 aa26.5■■□□□ 1.83
ESRRB-203ENST00000507951 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
ESRRB-203ENST00000507951 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
ESRRB-203ENST00000507951 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.82
ESRRB-203ENST00000507951 FBLN2P98095 1184 aa26.45■■□□□ 1.82
ESRRB-203ENST00000507951 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
ESRRB-203ENST00000507951 CYB5RLQ6IPT4 315 aa26.37■■□□□ 1.81
ESRRB-203ENST00000507951 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
ESRRB-203ENST00000507951 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
ESRRB-203ENST00000507951 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
ESRRB-203ENST00000507951 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
ESRRB-203ENST00000507951 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
ESRRB-203ENST00000507951 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
ESRRB-203ENST00000507951 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
ESRRB-203ENST00000507951 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
ESRRB-203ENST00000507951 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
ESRRB-203ENST00000507951 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
ESRRB-203ENST00000507951 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
ESRRB-203ENST00000507951 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
ESRRB-203ENST00000507951 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
ESRRB-203ENST00000507951 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
ESRRB-203ENST00000507951 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
ESRRB-203ENST00000507951 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
ESRRB-203ENST00000507951 CEP170Q5SW79 1584 aa26■■□□□ 1.75
ESRRB-203ENST00000507951 GRIN2AQ12879 1464 aa26■■□□□ 1.75
ESRRB-203ENST00000507951 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
ESRRB-203ENST00000507951 NUP160Q12769 1436 aa25.89■■□□□ 1.74
ESRRB-203ENST00000507951 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
ESRRB-203ENST00000507951 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
ESRRB-203ENST00000507951 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
ESRRB-203ENST00000507951 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
ESRRB-203ENST00000507951 PRG4Q92954 1404 aaPredicted RBP25.63■■□□□ 1.69
ESRRB-203ENST00000507951 KIF13AQ9H1H9 1805 aa25.62■■□□□ 1.69
ESRRB-203ENST00000507951 JPH4Q96JJ6 628 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms