RNA–Protein interactions for RNA: ENST00000507719.1

CLNK-203, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

TSL 1 (best) BASIC

Gene CLNK, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-203ENST00000507719 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
CLNK-203ENST00000507719 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
CLNK-203ENST00000507719 ABCC9O60706 1549 aa27.51■■■□□ 2
CLNK-203ENST00000507719 DCAF8L2P0C7V8 631 aa26.53■■□□□ 1.84
CLNK-203ENST00000507719 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
CLNK-203ENST00000507719 NACADO15069 1562 aa26.41■■□□□ 1.82
CLNK-203ENST00000507719 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
CLNK-203ENST00000507719 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
CLNK-203ENST00000507719 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
CLNK-203ENST00000507719 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
CLNK-203ENST00000507719 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
CLNK-203ENST00000507719 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
CLNK-203ENST00000507719 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
CLNK-203ENST00000507719 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
CLNK-203ENST00000507719 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
CLNK-203ENST00000507719 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
CLNK-203ENST00000507719 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
CLNK-203ENST00000507719 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
CLNK-203ENST00000507719 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
CLNK-203ENST00000507719 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
CLNK-203ENST00000507719 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
CLNK-203ENST00000507719 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
CLNK-203ENST00000507719 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
CLNK-203ENST00000507719 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
CLNK-203ENST00000507719 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
CLNK-203ENST00000507719 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
CLNK-203ENST00000507719 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
CLNK-203ENST00000507719 WIZO95785 1651 aa24.16■■□□□ 1.46
CLNK-203ENST00000507719 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
CLNK-203ENST00000507719 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
CLNK-203ENST00000507719 NESP48681 1621 aa23.81■■□□□ 1.4
CLNK-203ENST00000507719 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
CLNK-203ENST00000507719 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
CLNK-203ENST00000507719 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
CLNK-203ENST00000507719 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
CLNK-203ENST00000507719 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
CLNK-203ENST00000507719 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
CLNK-203ENST00000507719 CFTRP13569 1480 aa23.54■■□□□ 1.36
CLNK-203ENST00000507719 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
CLNK-203ENST00000507719 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
CLNK-203ENST00000507719 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
CLNK-203ENST00000507719 CUX2O14529 1486 aa23.39■■□□□ 1.34
CLNK-203ENST00000507719 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
CLNK-203ENST00000507719 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
CLNK-203ENST00000507719 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
CLNK-203ENST00000507719 WDR62O43379 1518 aa23.24■■□□□ 1.31
CLNK-203ENST00000507719 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
CLNK-203ENST00000507719 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
CLNK-203ENST00000507719 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
CLNK-203ENST00000507719 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
CLNK-203ENST00000507719 CUX1P39880 1505 aa22.89■■□□□ 1.26
CLNK-203ENST00000507719 IFT140Q96RY7 1462 aa22.89■■□□□ 1.25
CLNK-203ENST00000507719 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
CLNK-203ENST00000507719 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
CLNK-203ENST00000507719 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
CLNK-203ENST00000507719 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
CLNK-203ENST00000507719 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
CLNK-203ENST00000507719 SOGA1O94964 1423 aa22.77■■□□□ 1.24
CLNK-203ENST00000507719 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
CLNK-203ENST00000507719 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
CLNK-203ENST00000507719 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
CLNK-203ENST00000507719 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
CLNK-203ENST00000507719 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
CLNK-203ENST00000507719 AQRO60306 1485 aaKnown RBP eCLIP22.68■■□□□ 1.22
CLNK-203ENST00000507719 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
CLNK-203ENST00000507719 DNAJC5Q9H3Z4 198 aa22.62■■□□□ 1.21
CLNK-203ENST00000507719 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
CLNK-203ENST00000507719 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
CLNK-203ENST00000507719 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
CLNK-203ENST00000507719 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
CLNK-203ENST00000507719 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
CLNK-203ENST00000507719 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
CLNK-203ENST00000507719 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
CLNK-203ENST00000507719 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
CLNK-203ENST00000507719 FBLN2P98095 1184 aa22.45■■□□□ 1.18
CLNK-203ENST00000507719 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
CLNK-203ENST00000507719 CHD1O14646 1710 aa22.41■■□□□ 1.18
CLNK-203ENST00000507719 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
CLNK-203ENST00000507719 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
CLNK-203ENST00000507719 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
CLNK-203ENST00000507719 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
CLNK-203ENST00000507719 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
CLNK-203ENST00000507719 ADAMTS12P58397 1594 aa22.28■■□□□ 1.16
CLNK-203ENST00000507719 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
CLNK-203ENST00000507719 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
CLNK-203ENST00000507719 IGF1RP08069 1367 aa22.18■■□□□ 1.14
CLNK-203ENST00000507719 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
CLNK-203ENST00000507719 CUL7Q14999 1698 aa22.13■■□□□ 1.13
CLNK-203ENST00000507719 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
CLNK-203ENST00000507719 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
CLNK-203ENST00000507719 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
CLNK-203ENST00000507719 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
CLNK-203ENST00000507719 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
CLNK-203ENST00000507719 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
CLNK-203ENST00000507719 NUP160Q12769 1436 aa22.08■■□□□ 1.13
CLNK-203ENST00000507719 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
CLNK-203ENST00000507719 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
CLNK-203ENST00000507719 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
CLNK-203ENST00000507719 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
CLNK-203ENST00000507719 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms