RNA–Protein interactions for RNA: ENST00000507669.5

MRPL3-205, Transcript of mitochondrial ribosomal protein L3, humanhuman

TSL 3

Gene MRPL3, Length 848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3-205ENST00000507669 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
MRPL3-205ENST00000507669 ABCC9O60706 1549 aa32.28■■■□□ 2.76
MRPL3-205ENST00000507669 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
MRPL3-205ENST00000507669 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
MRPL3-205ENST00000507669 RB1CC1Q8TDY2 1594 aa30.23■■■□□ 2.43
MRPL3-205ENST00000507669 PABPN1Q86U42 306 aaKnown RBP eCLIP30.14■■■□□ 2.42
MRPL3-205ENST00000507669 NACADO15069 1562 aa29.94■■■□□ 2.38
MRPL3-205ENST00000507669 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
MRPL3-205ENST00000507669 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
MRPL3-205ENST00000507669 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.31
MRPL3-205ENST00000507669 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
MRPL3-205ENST00000507669 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
MRPL3-205ENST00000507669 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
MRPL3-205ENST00000507669 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
MRPL3-205ENST00000507669 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
MRPL3-205ENST00000507669 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
MRPL3-205ENST00000507669 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
MRPL3-205ENST00000507669 DNAJC5Q9H3Z4 198 aa28.77■■■□□ 2.2
MRPL3-205ENST00000507669 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
MRPL3-205ENST00000507669 CUX2O14529 1486 aa27.89■■■□□ 2.05
MRPL3-205ENST00000507669 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
MRPL3-205ENST00000507669 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
MRPL3-205ENST00000507669 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
MRPL3-205ENST00000507669 NESP48681 1621 aa27.64■■■□□ 2.02
MRPL3-205ENST00000507669 HMGXB3Q12766 1538 aa27.38■■□□□ 1.97
MRPL3-205ENST00000507669 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
MRPL3-205ENST00000507669 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
MRPL3-205ENST00000507669 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.96
MRPL3-205ENST00000507669 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
MRPL3-205ENST00000507669 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
MRPL3-205ENST00000507669 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
MRPL3-205ENST00000507669 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
MRPL3-205ENST00000507669 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
MRPL3-205ENST00000507669 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
MRPL3-205ENST00000507669 PDS5BQ9NTI5 1447 aa27.02■■□□□ 1.92
MRPL3-205ENST00000507669 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
MRPL3-205ENST00000507669 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
MRPL3-205ENST00000507669 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
MRPL3-205ENST00000507669 WDR62O43379 1518 aa26.78■■□□□ 1.88
MRPL3-205ENST00000507669 WIZO95785 1651 aa26.67■■□□□ 1.86
MRPL3-205ENST00000507669 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
MRPL3-205ENST00000507669 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
MRPL3-205ENST00000507669 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
MRPL3-205ENST00000507669 CFTRP13569 1480 aa26.51■■□□□ 1.83
MRPL3-205ENST00000507669 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
MRPL3-205ENST00000507669 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
MRPL3-205ENST00000507669 TOP2AP11388 1531 aaKnown RBP26.32■■□□□ 1.8
MRPL3-205ENST00000507669 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
MRPL3-205ENST00000507669 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
MRPL3-205ENST00000507669 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
MRPL3-205ENST00000507669 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
MRPL3-205ENST00000507669 ARHGEF11O15085 1522 aa26.18■■□□□ 1.78
MRPL3-205ENST00000507669 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
MRPL3-205ENST00000507669 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
MRPL3-205ENST00000507669 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
MRPL3-205ENST00000507669 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
MRPL3-205ENST00000507669 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
MRPL3-205ENST00000507669 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.752e-8■■■■■ 42.3
MRPL3-205ENST00000507669 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
MRPL3-205ENST00000507669 TRHP20396 242 aaPredicted RBP25.93■■□□□ 1.74
MRPL3-205ENST00000507669 EIF4G3O43432 1585 aaKnown RBP25.88■■□□□ 1.73
MRPL3-205ENST00000507669 FBLN2P98095 1184 aa25.86■■□□□ 1.73
MRPL3-205ENST00000507669 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
MRPL3-205ENST00000507669 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
MRPL3-205ENST00000507669 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
MRPL3-205ENST00000507669 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
MRPL3-205ENST00000507669 TDRD9Q8NDG6 1382 aaKnown RBP25.76■■□□□ 1.71
MRPL3-205ENST00000507669 POLA1P09884 1462 aaPredicted RBP25.75■■□□□ 1.71
MRPL3-205ENST00000507669 CHD1O14646 1710 aa25.71■■□□□ 1.71
MRPL3-205ENST00000507669 SOGA1O94964 1423 aa25.64■■□□□ 1.7
MRPL3-205ENST00000507669 SNAPC4Q5SXM2 1469 aa25.59■■□□□ 1.69
MRPL3-205ENST00000507669 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.69
MRPL3-205ENST00000507669 CHMP7Q8WUX9 453 aaPredicted RBP25.55■■□□□ 1.68
MRPL3-205ENST00000507669 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
MRPL3-205ENST00000507669 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
MRPL3-205ENST00000507669 CUX1P39880 1505 aa25.43■■□□□ 1.66
MRPL3-205ENST00000507669 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
MRPL3-205ENST00000507669 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
MRPL3-205ENST00000507669 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
MRPL3-205ENST00000507669 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
MRPL3-205ENST00000507669 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
MRPL3-205ENST00000507669 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
MRPL3-205ENST00000507669 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
MRPL3-205ENST00000507669 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
MRPL3-205ENST00000507669 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
MRPL3-205ENST00000507669 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
MRPL3-205ENST00000507669 NUP160Q12769 1436 aa25.09■■□□□ 1.61
MRPL3-205ENST00000507669 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.61
MRPL3-205ENST00000507669 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
MRPL3-205ENST00000507669 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
MRPL3-205ENST00000507669 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
MRPL3-205ENST00000507669 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
MRPL3-205ENST00000507669 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
MRPL3-205ENST00000507669 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
MRPL3-205ENST00000507669 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
MRPL3-205ENST00000507669 JPH4Q96JJ6 628 aa24.91■■□□□ 1.58
MRPL3-205ENST00000507669 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
MRPL3-205ENST00000507669 PRG4Q92954 1404 aaPredicted RBP24.89■■□□□ 1.58
MRPL3-205ENST00000507669 KDM4FA0A1W2PPD8 638 aa24.87■■□□□ 1.57
MRPL3-205ENST00000507669 FAM69CQ0P6D2 419 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms