RNA–Protein interactions for RNA: ENST00000507522.1

SDHA-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 644 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-208ENST00000507522 NISCHQ9Y2I1 1504 aa29.9■■■□□ 2.38
SDHA-208ENST00000507522 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
SDHA-208ENST00000507522 ABCC9O60706 1549 aa25.99■■□□□ 1.75
SDHA-208ENST00000507522 NACADO15069 1562 aa24.97■■□□□ 1.59
SDHA-208ENST00000507522 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
SDHA-208ENST00000507522 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
SDHA-208ENST00000507522 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
SDHA-208ENST00000507522 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
SDHA-208ENST00000507522 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
SDHA-208ENST00000507522 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
SDHA-208ENST00000507522 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
SDHA-208ENST00000507522 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
SDHA-208ENST00000507522 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
SDHA-208ENST00000507522 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
SDHA-208ENST00000507522 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
SDHA-208ENST00000507522 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
SDHA-208ENST00000507522 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
SDHA-208ENST00000507522 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
SDHA-208ENST00000507522 SMARCA4P51532 1647 aa23.21■■□□□ 1.31
SDHA-208ENST00000507522 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
SDHA-208ENST00000507522 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
SDHA-208ENST00000507522 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
SDHA-208ENST00000507522 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
SDHA-208ENST00000507522 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
SDHA-208ENST00000507522 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
SDHA-208ENST00000507522 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
SDHA-208ENST00000507522 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
SDHA-208ENST00000507522 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
SDHA-208ENST00000507522 WIZO95785 1651 aa22.8■■□□□ 1.24
SDHA-208ENST00000507522 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
SDHA-208ENST00000507522 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
SDHA-208ENST00000507522 CUX2O14529 1486 aa22.51■■□□□ 1.19
SDHA-208ENST00000507522 ERCC6Q03468 1493 aa22.45■■□□□ 1.18
SDHA-208ENST00000507522 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
SDHA-208ENST00000507522 NESP48681 1621 aa22.42■■□□□ 1.18
SDHA-208ENST00000507522 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
SDHA-208ENST00000507522 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
SDHA-208ENST00000507522 CFTRP13569 1480 aa22.22■■□□□ 1.15
SDHA-208ENST00000507522 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
SDHA-208ENST00000507522 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
SDHA-208ENST00000507522 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
SDHA-208ENST00000507522 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
SDHA-208ENST00000507522 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
SDHA-208ENST00000507522 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
SDHA-208ENST00000507522 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
SDHA-208ENST00000507522 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
SDHA-208ENST00000507522 WDR62O43379 1518 aa21.96■■□□□ 1.11
SDHA-208ENST00000507522 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
SDHA-208ENST00000507522 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
SDHA-208ENST00000507522 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
SDHA-208ENST00000507522 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
SDHA-208ENST00000507522 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
SDHA-208ENST00000507522 CUX1P39880 1505 aa21.6■■□□□ 1.05
SDHA-208ENST00000507522 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
SDHA-208ENST00000507522 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
SDHA-208ENST00000507522 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
SDHA-208ENST00000507522 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
SDHA-208ENST00000507522 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
SDHA-208ENST00000507522 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
SDHA-208ENST00000507522 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
SDHA-208ENST00000507522 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
SDHA-208ENST00000507522 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
SDHA-208ENST00000507522 SOGA1O94964 1423 aa21.43■■□□□ 1.02
SDHA-208ENST00000507522 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
SDHA-208ENST00000507522 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
SDHA-208ENST00000507522 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
SDHA-208ENST00000507522 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
SDHA-208ENST00000507522 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1
SDHA-208ENST00000507522 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 12e-6■■□□□ 13.8
SDHA-208ENST00000507522 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
SDHA-208ENST00000507522 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
SDHA-208ENST00000507522 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
SDHA-208ENST00000507522 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
SDHA-208ENST00000507522 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
SDHA-208ENST00000507522 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
SDHA-208ENST00000507522 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
SDHA-208ENST00000507522 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
SDHA-208ENST00000507522 CHD1O14646 1710 aa21.16■□□□□ 0.98
SDHA-208ENST00000507522 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
SDHA-208ENST00000507522 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
SDHA-208ENST00000507522 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
SDHA-208ENST00000507522 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
SDHA-208ENST00000507522 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
SDHA-208ENST00000507522 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
SDHA-208ENST00000507522 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
SDHA-208ENST00000507522 FHAD1B1AJZ9 1412 aa20.96■□□□□ 0.95
SDHA-208ENST00000507522 FBLN2P98095 1184 aa20.96■□□□□ 0.95
SDHA-208ENST00000507522 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
SDHA-208ENST00000507522 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
SDHA-208ENST00000507522 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
SDHA-208ENST00000507522 CUL7Q14999 1698 aa20.91■□□□□ 0.94
SDHA-208ENST00000507522 IGF1RP08069 1367 aa20.9■□□□□ 0.94
SDHA-208ENST00000507522 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
SDHA-208ENST00000507522 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
SDHA-208ENST00000507522 NUP160Q12769 1436 aa20.86■□□□□ 0.93
SDHA-208ENST00000507522 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
SDHA-208ENST00000507522 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.93
SDHA-208ENST00000507522 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
SDHA-208ENST00000507522 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
SDHA-208ENST00000507522 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms