RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.45
COL6A4P2-203ENST00000507516 ABCC9O60706 1549 aa22.26■■□□□ 1.15
COL6A4P2-203ENST00000507516 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
COL6A4P2-203ENST00000507516 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
COL6A4P2-203ENST00000507516 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
COL6A4P2-203ENST00000507516 NACADO15069 1562 aa20.71■□□□□ 0.91
COL6A4P2-203ENST00000507516 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
COL6A4P2-203ENST00000507516 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
COL6A4P2-203ENST00000507516 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
COL6A4P2-203ENST00000507516 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.84
COL6A4P2-203ENST00000507516 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
COL6A4P2-203ENST00000507516 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
COL6A4P2-203ENST00000507516 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
COL6A4P2-203ENST00000507516 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
COL6A4P2-203ENST00000507516 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
COL6A4P2-203ENST00000507516 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
COL6A4P2-203ENST00000507516 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
COL6A4P2-203ENST00000507516 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
COL6A4P2-203ENST00000507516 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
COL6A4P2-203ENST00000507516 CUX2O14529 1486 aa19.36■□□□□ 0.69
COL6A4P2-203ENST00000507516 ERCC6Q03468 1493 aa19.27■□□□□ 0.67
COL6A4P2-203ENST00000507516 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
COL6A4P2-203ENST00000507516 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
COL6A4P2-203ENST00000507516 NESP48681 1621 aa18.98■□□□□ 0.63
COL6A4P2-203ENST00000507516 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
COL6A4P2-203ENST00000507516 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
COL6A4P2-203ENST00000507516 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
COL6A4P2-203ENST00000507516 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
COL6A4P2-203ENST00000507516 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
COL6A4P2-203ENST00000507516 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
COL6A4P2-203ENST00000507516 LAMC3Q9Y6N6 1575 aa18.75■□□□□ 0.59
COL6A4P2-203ENST00000507516 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
COL6A4P2-203ENST00000507516 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
COL6A4P2-203ENST00000507516 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
COL6A4P2-203ENST00000507516 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
COL6A4P2-203ENST00000507516 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
COL6A4P2-203ENST00000507516 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
COL6A4P2-203ENST00000507516 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
COL6A4P2-203ENST00000507516 WDR62O43379 1518 aa18.51■□□□□ 0.55
COL6A4P2-203ENST00000507516 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
COL6A4P2-203ENST00000507516 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
COL6A4P2-203ENST00000507516 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
COL6A4P2-203ENST00000507516 WIZO95785 1651 aa18.25■□□□□ 0.51
COL6A4P2-203ENST00000507516 CFTRP13569 1480 aa18.25■□□□□ 0.51
COL6A4P2-203ENST00000507516 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
COL6A4P2-203ENST00000507516 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
COL6A4P2-203ENST00000507516 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
COL6A4P2-203ENST00000507516 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
COL6A4P2-203ENST00000507516 ARHGEF11O15085 1522 aa18.11■□□□□ 0.49
COL6A4P2-203ENST00000507516 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
COL6A4P2-203ENST00000507516 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
COL6A4P2-203ENST00000507516 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
COL6A4P2-203ENST00000507516 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
COL6A4P2-203ENST00000507516 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
COL6A4P2-203ENST00000507516 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
COL6A4P2-203ENST00000507516 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
COL6A4P2-203ENST00000507516 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
COL6A4P2-203ENST00000507516 EIF4G3O43432 1585 aaKnown RBP17.9■□□□□ 0.46
COL6A4P2-203ENST00000507516 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
COL6A4P2-203ENST00000507516 FBLN2P98095 1184 aa17.86■□□□□ 0.45
COL6A4P2-203ENST00000507516 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
COL6A4P2-203ENST00000507516 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL6A4P2-203ENST00000507516 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
COL6A4P2-203ENST00000507516 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
COL6A4P2-203ENST00000507516 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
COL6A4P2-203ENST00000507516 CHD1O14646 1710 aa17.78■□□□□ 0.44
COL6A4P2-203ENST00000507516 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
COL6A4P2-203ENST00000507516 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
COL6A4P2-203ENST00000507516 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
COL6A4P2-203ENST00000507516 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
COL6A4P2-203ENST00000507516 SOGA1O94964 1423 aa17.66■□□□□ 0.42
COL6A4P2-203ENST00000507516 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
COL6A4P2-203ENST00000507516 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
COL6A4P2-203ENST00000507516 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
COL6A4P2-203ENST00000507516 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
COL6A4P2-203ENST00000507516 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
COL6A4P2-203ENST00000507516 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
COL6A4P2-203ENST00000507516 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
COL6A4P2-203ENST00000507516 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
COL6A4P2-203ENST00000507516 SYNJ2O15056 1496 aa17.54■□□□□ 0.4
COL6A4P2-203ENST00000507516 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
COL6A4P2-203ENST00000507516 CUX1P39880 1505 aa17.45■□□□□ 0.38
COL6A4P2-203ENST00000507516 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
COL6A4P2-203ENST00000507516 PBRM1Q86U86 1689 aa17.33■□□□□ 0.37
COL6A4P2-203ENST00000507516 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.37
COL6A4P2-203ENST00000507516 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
COL6A4P2-203ENST00000507516 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
COL6A4P2-203ENST00000507516 NUP160Q12769 1436 aa17.28■□□□□ 0.36
COL6A4P2-203ENST00000507516 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
COL6A4P2-203ENST00000507516 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
COL6A4P2-203ENST00000507516 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
COL6A4P2-203ENST00000507516 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
COL6A4P2-203ENST00000507516 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
COL6A4P2-203ENST00000507516 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
COL6A4P2-203ENST00000507516 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
COL6A4P2-203ENST00000507516 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
COL6A4P2-203ENST00000507516 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
COL6A4P2-203ENST00000507516 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
COL6A4P2-203ENST00000507516 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL6A4P2-203ENST00000507516 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms