RNA–Protein interactions for RNA: ENST00000507487.5

CAST-218, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-218ENST00000507487 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
CAST-218ENST00000507487 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
CAST-218ENST00000507487 ABCC9O60706 1549 aa23.8■■□□□ 1.4
CAST-218ENST00000507487 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
CAST-218ENST00000507487 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
CAST-218ENST00000507487 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
CAST-218ENST00000507487 NACADO15069 1562 aa23.14■■□□□ 1.3
CAST-218ENST00000507487 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
CAST-218ENST00000507487 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
CAST-218ENST00000507487 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
CAST-218ENST00000507487 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
CAST-218ENST00000507487 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
CAST-218ENST00000507487 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
CAST-218ENST00000507487 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
CAST-218ENST00000507487 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
CAST-218ENST00000507487 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
CAST-218ENST00000507487 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
CAST-218ENST00000507487 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
CAST-218ENST00000507487 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
CAST-218ENST00000507487 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
CAST-218ENST00000507487 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
CAST-218ENST00000507487 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
CAST-218ENST00000507487 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
CAST-218ENST00000507487 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
CAST-218ENST00000507487 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
CAST-218ENST00000507487 WIZO95785 1651 aa21.34■■□□□ 1.01
CAST-218ENST00000507487 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
CAST-218ENST00000507487 HMGXB3Q12766 1538 aa21.28■■□□□ 1
CAST-218ENST00000507487 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
CAST-218ENST00000507487 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
CAST-218ENST00000507487 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
CAST-218ENST00000507487 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
CAST-218ENST00000507487 LAMC3Q9Y6N6 1575 aa20.74■□□□□ 0.91
CAST-218ENST00000507487 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
CAST-218ENST00000507487 NESP48681 1621 aa20.7■□□□□ 0.9
CAST-218ENST00000507487 CFTRP13569 1480 aa20.69■□□□□ 0.9
CAST-218ENST00000507487 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
CAST-218ENST00000507487 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
CAST-218ENST00000507487 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
CAST-218ENST00000507487 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
CAST-218ENST00000507487 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
CAST-218ENST00000507487 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
CAST-218ENST00000507487 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
CAST-218ENST00000507487 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
CAST-218ENST00000507487 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
CAST-218ENST00000507487 WDR62O43379 1518 aa20.26■□□□□ 0.83
CAST-218ENST00000507487 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
CAST-218ENST00000507487 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
CAST-218ENST00000507487 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
CAST-218ENST00000507487 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
CAST-218ENST00000507487 CUX1P39880 1505 aa20.19■□□□□ 0.82
CAST-218ENST00000507487 CUX2O14529 1486 aa20.16■□□□□ 0.82
CAST-218ENST00000507487 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
CAST-218ENST00000507487 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
CAST-218ENST00000507487 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
CAST-218ENST00000507487 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
CAST-218ENST00000507487 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
CAST-218ENST00000507487 IFT140Q96RY7 1462 aa20■□□□□ 0.79
CAST-218ENST00000507487 SOGA1O94964 1423 aa20■□□□□ 0.79
CAST-218ENST00000507487 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
CAST-218ENST00000507487 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
CAST-218ENST00000507487 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
CAST-218ENST00000507487 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
CAST-218ENST00000507487 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
CAST-218ENST00000507487 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
CAST-218ENST00000507487 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
CAST-218ENST00000507487 EIF4G3O43432 1585 aaKnown RBP19.82■□□□□ 0.76
CAST-218ENST00000507487 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
CAST-218ENST00000507487 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.765e-6■■□□□ 14.3
CAST-218ENST00000507487 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
CAST-218ENST00000507487 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
CAST-218ENST00000507487 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
CAST-218ENST00000507487 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
CAST-218ENST00000507487 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
CAST-218ENST00000507487 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
CAST-218ENST00000507487 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
CAST-218ENST00000507487 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
CAST-218ENST00000507487 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
CAST-218ENST00000507487 EEA1Q15075 1411 aa19.63■□□□□ 0.73
CAST-218ENST00000507487 IGF1RP08069 1367 aa19.62■□□□□ 0.73
CAST-218ENST00000507487 CUL7Q14999 1698 aa19.58■□□□□ 0.72
CAST-218ENST00000507487 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
CAST-218ENST00000507487 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
CAST-218ENST00000507487 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
CAST-218ENST00000507487 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
CAST-218ENST00000507487 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
CAST-218ENST00000507487 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
CAST-218ENST00000507487 CHD1O14646 1710 aa19.52■□□□□ 0.72
CAST-218ENST00000507487 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
CAST-218ENST00000507487 FBLN2P98095 1184 aa19.5■□□□□ 0.71
CAST-218ENST00000507487 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
CAST-218ENST00000507487 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
CAST-218ENST00000507487 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
CAST-218ENST00000507487 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
CAST-218ENST00000507487 KIF21BO75037 1637 aa19.4■□□□□ 0.7
CAST-218ENST00000507487 NUP160Q12769 1436 aa19.35■□□□□ 0.69
CAST-218ENST00000507487 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
CAST-218ENST00000507487 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
CAST-218ENST00000507487 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
CAST-218ENST00000507487 CTTNBP2Q8WZ74 1663 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms