RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 NISCHQ9Y2I1 1504 aa39.43■■■■□ 3.9
SSBP2-207ENST00000507472 ABCC9O60706 1549 aa35.25■■■■□ 3.23
SSBP2-207ENST00000507472 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
SSBP2-207ENST00000507472 RB1CC1Q8TDY2 1594 aa33.52■■■□□ 2.96
SSBP2-207ENST00000507472 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
SSBP2-207ENST00000507472 NACADO15069 1562 aa33.34■■■□□ 2.93
SSBP2-207ENST00000507472 DNAJC5BQ9UF47 199 aa33.06■■■□□ 2.88
SSBP2-207ENST00000507472 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.86
SSBP2-207ENST00000507472 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
SSBP2-207ENST00000507472 UNC13AQ9UPW8 1703 aa32.7■■■□□ 2.83
SSBP2-207ENST00000507472 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
SSBP2-207ENST00000507472 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
SSBP2-207ENST00000507472 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
SSBP2-207ENST00000507472 SCRIBQ14160 1630 aa32.17■■■□□ 2.74
SSBP2-207ENST00000507472 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
SSBP2-207ENST00000507472 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
SSBP2-207ENST00000507472 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
SSBP2-207ENST00000507472 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
SSBP2-207ENST00000507472 NCAPD3P42695 1498 aa30.83■■■□□ 2.53
SSBP2-207ENST00000507472 ATAD2BQ9ULI0 1458 aa30.76■■■□□ 2.51
SSBP2-207ENST00000507472 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
SSBP2-207ENST00000507472 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
SSBP2-207ENST00000507472 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
SSBP2-207ENST00000507472 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
SSBP2-207ENST00000507472 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
SSBP2-207ENST00000507472 ERCC6Q03468 1493 aa30.4■■■□□ 2.46
SSBP2-207ENST00000507472 MROH2BQ7Z745 1585 aa30.4■■■□□ 2.46
SSBP2-207ENST00000507472 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
SSBP2-207ENST00000507472 NESP48681 1621 aa30.31■■■□□ 2.44
SSBP2-207ENST00000507472 CUX2O14529 1486 aa30.27■■■□□ 2.44
SSBP2-207ENST00000507472 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
SSBP2-207ENST00000507472 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
SSBP2-207ENST00000507472 WIZO95785 1651 aa30■■■□□ 2.39
SSBP2-207ENST00000507472 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
SSBP2-207ENST00000507472 CADPSQ9ULU8 1353 aa29.93■■■□□ 2.38
SSBP2-207ENST00000507472 THOC2Q8NI27 1593 aaKnown RBP29.87■■■□□ 2.37
SSBP2-207ENST00000507472 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
SSBP2-207ENST00000507472 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
SSBP2-207ENST00000507472 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
SSBP2-207ENST00000507472 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
SSBP2-207ENST00000507472 CFTRP13569 1480 aa29.58■■■□□ 2.33
SSBP2-207ENST00000507472 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
SSBP2-207ENST00000507472 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
SSBP2-207ENST00000507472 WDR62O43379 1518 aa29.53■■■□□ 2.32
SSBP2-207ENST00000507472 CCDC88BA6NC98 1476 aa29.36■■■□□ 2.29
SSBP2-207ENST00000507472 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
SSBP2-207ENST00000507472 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
SSBP2-207ENST00000507472 OSCARQ8IYS5 282 aa29.04■■■□□ 2.24
SSBP2-207ENST00000507472 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
SSBP2-207ENST00000507472 TRIM41Q8WV44 630 aa28.97■■■□□ 2.23
SSBP2-207ENST00000507472 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
SSBP2-207ENST00000507472 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
SSBP2-207ENST00000507472 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
SSBP2-207ENST00000507472 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
SSBP2-207ENST00000507472 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
SSBP2-207ENST00000507472 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
SSBP2-207ENST00000507472 POLA1P09884 1462 aaPredicted RBP28.71■■■□□ 2.19
SSBP2-207ENST00000507472 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
SSBP2-207ENST00000507472 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
SSBP2-207ENST00000507472 RAD54L2Q9Y4B4 1467 aa28.65■■■□□ 2.18
SSBP2-207ENST00000507472 SOGA1O94964 1423 aa28.64■■■□□ 2.18
SSBP2-207ENST00000507472 TDRD9Q8NDG6 1382 aaKnown RBP28.59■■■□□ 2.17
SSBP2-207ENST00000507472 FBLN2P98095 1184 aa28.56■■■□□ 2.16
SSBP2-207ENST00000507472 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
SSBP2-207ENST00000507472 CUX1P39880 1505 aa28.54■■■□□ 2.16
SSBP2-207ENST00000507472 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
SSBP2-207ENST00000507472 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
SSBP2-207ENST00000507472 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
SSBP2-207ENST00000507472 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
SSBP2-207ENST00000507472 CHD1O14646 1710 aa28.43■■■□□ 2.14
SSBP2-207ENST00000507472 CYB5RLQ6IPT4 315 aa28.37■■■□□ 2.13
SSBP2-207ENST00000507472 SNAPC4Q5SXM2 1469 aa28.37■■■□□ 2.13
SSBP2-207ENST00000507472 CHMP7Q8WUX9 453 aaPredicted RBP28.36■■■□□ 2.13
SSBP2-207ENST00000507472 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
SSBP2-207ENST00000507472 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
SSBP2-207ENST00000507472 MAGI1Q96QZ7 1491 aaPredicted RBP28.29■■■□□ 2.12
SSBP2-207ENST00000507472 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
SSBP2-207ENST00000507472 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
SSBP2-207ENST00000507472 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
SSBP2-207ENST00000507472 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
SSBP2-207ENST00000507472 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
SSBP2-207ENST00000507472 CLASP1Q7Z460 1538 aa28.15■■■□□ 2.1
SSBP2-207ENST00000507472 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
SSBP2-207ENST00000507472 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
SSBP2-207ENST00000507472 PBRM1Q86U86 1689 aa28.11■■■□□ 2.09
SSBP2-207ENST00000507472 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
SSBP2-207ENST00000507472 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
SSBP2-207ENST00000507472 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
SSBP2-207ENST00000507472 GRIN2AQ12879 1464 aa27.95■■■□□ 2.07
SSBP2-207ENST00000507472 FHAD1B1AJZ9 1412 aa27.91■■■□□ 2.06
SSBP2-207ENST00000507472 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
SSBP2-207ENST00000507472 NUP160Q12769 1436 aa27.86■■■□□ 2.05
SSBP2-207ENST00000507472 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
SSBP2-207ENST00000507472 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
SSBP2-207ENST00000507472 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
SSBP2-207ENST00000507472 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
SSBP2-207ENST00000507472 SHROOM2Q13796 1616 aa27.66■■■□□ 2.02
SSBP2-207ENST00000507472 IGF1RP08069 1367 aa27.64■■■□□ 2.02
SSBP2-207ENST00000507472 PRG4Q92954 1404 aaPredicted RBP27.62■■■□□ 2.01
SSBP2-207ENST00000507472 KIF27Q86VH2 1401 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms