RNA–Protein interactions for RNA: ENST00000507430.1

CTNND2-210, Transcript of catenin delta 2, humanhuman

TSL 2

Gene CTNND2, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-210ENST00000507430 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
CTNND2-210ENST00000507430 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
CTNND2-210ENST00000507430 ABCC9O60706 1549 aa34.31■■■■□ 3.08
CTNND2-210ENST00000507430 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
CTNND2-210ENST00000507430 NACADO15069 1562 aa33.06■■■□□ 2.88
CTNND2-210ENST00000507430 RB1CC1Q8TDY2 1594 aa33.06■■■□□ 2.88
CTNND2-210ENST00000507430 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
CTNND2-210ENST00000507430 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
CTNND2-210ENST00000507430 DCAF1Q9Y4B6 1507 aa32.88■■■□□ 2.85
CTNND2-210ENST00000507430 UNC13AQ9UPW8 1703 aa32.51■■■□□ 2.8
CTNND2-210ENST00000507430 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
CTNND2-210ENST00000507430 BICRAQ9NZM4 1560 aa32.18■■■□□ 2.74
CTNND2-210ENST00000507430 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
CTNND2-210ENST00000507430 SHROOM4Q9ULL8 1493 aa31.7■■■□□ 2.66
CTNND2-210ENST00000507430 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
CTNND2-210ENST00000507430 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
CTNND2-210ENST00000507430 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
CTNND2-210ENST00000507430 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
CTNND2-210ENST00000507430 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
CTNND2-210ENST00000507430 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
CTNND2-210ENST00000507430 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
CTNND2-210ENST00000507430 ATAD2BQ9ULI0 1458 aa30.58■■■□□ 2.49
CTNND2-210ENST00000507430 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
CTNND2-210ENST00000507430 SMARCA2P51531 1590 aa30.53■■■□□ 2.48
CTNND2-210ENST00000507430 NCAPD3P42695 1498 aa30.49■■■□□ 2.47
CTNND2-210ENST00000507430 WIZO95785 1651 aa30.42■■■□□ 2.46
CTNND2-210ENST00000507430 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
CTNND2-210ENST00000507430 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
CTNND2-210ENST00000507430 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
CTNND2-210ENST00000507430 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
CTNND2-210ENST00000507430 NESP48681 1621 aa29.81■■■□□ 2.36
CTNND2-210ENST00000507430 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
CTNND2-210ENST00000507430 SUPT5HO00267 1087 aaKnown RBP29.68■■■□□ 2.34
CTNND2-210ENST00000507430 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
CTNND2-210ENST00000507430 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
CTNND2-210ENST00000507430 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
CTNND2-210ENST00000507430 CFTRP13569 1480 aa29.5■■■□□ 2.31
CTNND2-210ENST00000507430 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
CTNND2-210ENST00000507430 PRDM2Q13029 1718 aa29.45■■■□□ 2.3
CTNND2-210ENST00000507430 PDS5BQ9NTI5 1447 aa29.38■■■□□ 2.29
CTNND2-210ENST00000507430 THOC2Q8NI27 1593 aaKnown RBP29.35■■■□□ 2.29
CTNND2-210ENST00000507430 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
CTNND2-210ENST00000507430 CEP164Q9UPV0 1460 aa29.24■■■□□ 2.27
CTNND2-210ENST00000507430 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
CTNND2-210ENST00000507430 WDR62O43379 1518 aa29.12■■■□□ 2.25
CTNND2-210ENST00000507430 CUX2O14529 1486 aa29.1■■■□□ 2.25
CTNND2-210ENST00000507430 URB2Q14146 1524 aaKnown RBP29.07■■■□□ 2.24
CTNND2-210ENST00000507430 TOPBP1Q92547 1522 aa28.89■■■□□ 2.22
CTNND2-210ENST00000507430 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
CTNND2-210ENST00000507430 CUX1P39880 1505 aa28.8■■■□□ 2.2
CTNND2-210ENST00000507430 ABCC8Q09428 1581 aa28.76■■■□□ 2.19
CTNND2-210ENST00000507430 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
CTNND2-210ENST00000507430 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
CTNND2-210ENST00000507430 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
CTNND2-210ENST00000507430 BIVM-ERCC5R4GMW8 1640 aa28.62■■■□□ 2.17
CTNND2-210ENST00000507430 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
CTNND2-210ENST00000507430 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
CTNND2-210ENST00000507430 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
CTNND2-210ENST00000507430 TOP2BQ02880 1626 aa28.59■■■□□ 2.17
CTNND2-210ENST00000507430 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
CTNND2-210ENST00000507430 ZNF608Q9ULD9 1512 aaPredicted RBP28.54■■■□□ 2.16
CTNND2-210ENST00000507430 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
CTNND2-210ENST00000507430 EIF4G3O43432 1585 aaKnown RBP28.49■■■□□ 2.15
CTNND2-210ENST00000507430 SOGA1O94964 1423 aa28.46■■■□□ 2.15
CTNND2-210ENST00000507430 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.13
CTNND2-210ENST00000507430 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
CTNND2-210ENST00000507430 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
CTNND2-210ENST00000507430 ABCA5Q8WWZ7 1642 aa28.3■■■□□ 2.12
CTNND2-210ENST00000507430 PBRM1Q86U86 1689 aa28.25■■■□□ 2.11
CTNND2-210ENST00000507430 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
CTNND2-210ENST00000507430 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.09
CTNND2-210ENST00000507430 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
CTNND2-210ENST00000507430 CHD1O14646 1710 aa28.11■■■□□ 2.09
CTNND2-210ENST00000507430 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
CTNND2-210ENST00000507430 ADAMTS12P58397 1594 aa28.01■■■□□ 2.07
CTNND2-210ENST00000507430 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
CTNND2-210ENST00000507430 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
CTNND2-210ENST00000507430 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
CTNND2-210ENST00000507430 KIF27Q86VH2 1401 aa27.93■■■□□ 2.06
CTNND2-210ENST00000507430 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
CTNND2-210ENST00000507430 DNAJC5Q9H3Z4 198 aa27.89■■■□□ 2.06
CTNND2-210ENST00000507430 FBLN2P98095 1184 aa27.85■■■□□ 2.05
CTNND2-210ENST00000507430 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
CTNND2-210ENST00000507430 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
CTNND2-210ENST00000507430 CUL7Q14999 1698 aa27.82■■■□□ 2.04
CTNND2-210ENST00000507430 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
CTNND2-210ENST00000507430 IGF1RP08069 1367 aa27.82■■■□□ 2.04
CTNND2-210ENST00000507430 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
CTNND2-210ENST00000507430 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
CTNND2-210ENST00000507430 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
CTNND2-210ENST00000507430 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
CTNND2-210ENST00000507430 NUP160Q12769 1436 aa27.67■■■□□ 2.02
CTNND2-210ENST00000507430 CARMIL1Q5VZK9 1371 aa27.63■■■□□ 2.01
CTNND2-210ENST00000507430 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
CTNND2-210ENST00000507430 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
CTNND2-210ENST00000507430 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
CTNND2-210ENST00000507430 ARHGEF11O15085 1522 aa27.55■■■□□ 2
CTNND2-210ENST00000507430 PRXQ9BXM0 1461 aa27.53■■■□□ 2
CTNND2-210ENST00000507430 RAPGEF2Q9Y4G8 1499 aa27.53■■■□□ 2
CTNND2-210ENST00000507430 SHROOM2Q13796 1616 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms