RNA–Protein interactions for RNA: ENST00000507408.5

CDV3-206, Transcript of CDV3 homolog, humanhuman

TSL 2

Gene CDV3, Length 448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-206ENST00000507408 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
CDV3-206ENST00000507408 ABCC9O60706 1549 aa16.34■□□□□ 0.21
CDV3-206ENST00000507408 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
CDV3-206ENST00000507408 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
CDV3-206ENST00000507408 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
CDV3-206ENST00000507408 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
CDV3-206ENST00000507408 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
CDV3-206ENST00000507408 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
CDV3-206ENST00000507408 NACADO15069 1562 aa15.08■□□□□ 0
CDV3-206ENST00000507408 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
CDV3-206ENST00000507408 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
CDV3-206ENST00000507408 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
CDV3-206ENST00000507408 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
CDV3-206ENST00000507408 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
CDV3-206ENST00000507408 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
CDV3-206ENST00000507408 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
CDV3-206ENST00000507408 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
CDV3-206ENST00000507408 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
CDV3-206ENST00000507408 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
CDV3-206ENST00000507408 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
CDV3-206ENST00000507408 CUX2O14529 1486 aa14.31□□□□□ -0.12
CDV3-206ENST00000507408 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
CDV3-206ENST00000507408 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
CDV3-206ENST00000507408 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
CDV3-206ENST00000507408 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
CDV3-206ENST00000507408 NCAPD3P42695 1498 aa13.94□□□□□ -0.18
CDV3-206ENST00000507408 NESP48681 1621 aa13.84□□□□□ -0.19
CDV3-206ENST00000507408 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
CDV3-206ENST00000507408 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
CDV3-206ENST00000507408 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
CDV3-206ENST00000507408 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
CDV3-206ENST00000507408 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
CDV3-206ENST00000507408 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
CDV3-206ENST00000507408 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
CDV3-206ENST00000507408 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
CDV3-206ENST00000507408 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
CDV3-206ENST00000507408 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
CDV3-206ENST00000507408 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
CDV3-206ENST00000507408 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
CDV3-206ENST00000507408 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
CDV3-206ENST00000507408 WDR62O43379 1518 aa13.49□□□□□ -0.25
CDV3-206ENST00000507408 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
CDV3-206ENST00000507408 SENP3Q9H4L4 574 aaPredicted RBP13.46□□□□□ -0.25
CDV3-206ENST00000507408 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
CDV3-206ENST00000507408 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
CDV3-206ENST00000507408 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
CDV3-206ENST00000507408 CYB5RLQ6IPT4 315 aa13.38□□□□□ -0.27
CDV3-206ENST00000507408 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
CDV3-206ENST00000507408 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
CDV3-206ENST00000507408 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
CDV3-206ENST00000507408 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
CDV3-206ENST00000507408 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
CDV3-206ENST00000507408 ARHGEF11O15085 1522 aa13.33□□□□□ -0.28
CDV3-206ENST00000507408 CFTRP13569 1480 aa13.23□□□□□ -0.29
CDV3-206ENST00000507408 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
CDV3-206ENST00000507408 IFT140Q96RY7 1462 aa13.19□□□□□ -0.3
CDV3-206ENST00000507408 FBLN2P98095 1184 aa13.16□□□□□ -0.3
CDV3-206ENST00000507408 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
CDV3-206ENST00000507408 ARAP1Q96P48 1450 aa13.15□□□□□ -0.3
CDV3-206ENST00000507408 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
CDV3-206ENST00000507408 WIZO95785 1651 aa13.11□□□□□ -0.31
CDV3-206ENST00000507408 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.335e-6■■□□□ 14.3
CDV3-206ENST00000507408 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
CDV3-206ENST00000507408 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
CDV3-206ENST00000507408 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
CDV3-206ENST00000507408 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
CDV3-206ENST00000507408 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
CDV3-206ENST00000507408 CHD1O14646 1710 aa12.96□□□□□ -0.33
CDV3-206ENST00000507408 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
CDV3-206ENST00000507408 TDRD9Q8NDG6 1382 aaKnown RBP12.89□□□□□ -0.35
CDV3-206ENST00000507408 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
CDV3-206ENST00000507408 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
CDV3-206ENST00000507408 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
CDV3-206ENST00000507408 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
CDV3-206ENST00000507408 TARBP1Q13395 1621 aaKnown RBP12.86□□□□□ -0.35
CDV3-206ENST00000507408 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
CDV3-206ENST00000507408 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
CDV3-206ENST00000507408 SOGA1O94964 1423 aa12.85□□□□□ -0.35
CDV3-206ENST00000507408 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
CDV3-206ENST00000507408 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
CDV3-206ENST00000507408 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
CDV3-206ENST00000507408 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
CDV3-206ENST00000507408 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
CDV3-206ENST00000507408 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
CDV3-206ENST00000507408 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
CDV3-206ENST00000507408 ADRA2BP18089 450 aa12.71□□□□□ -0.37
CDV3-206ENST00000507408 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
CDV3-206ENST00000507408 FAM69CQ0P6D2 419 aa12.68□□□□□ -0.38
CDV3-206ENST00000507408 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
CDV3-206ENST00000507408 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDV3-206ENST00000507408 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
CDV3-206ENST00000507408 PPP6R1Q9UPN7 881 aa12.59□□□□□ -0.39
CDV3-206ENST00000507408 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
CDV3-206ENST00000507408 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
CDV3-206ENST00000507408 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
CDV3-206ENST00000507408 CUX1P39880 1505 aa12.57□□□□□ -0.4
CDV3-206ENST00000507408 NUP160Q12769 1436 aa12.55□□□□□ -0.4
CDV3-206ENST00000507408 KIF13AQ9H1H9 1805 aa12.54□□□□□ -0.4
CDV3-206ENST00000507408 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
CDV3-206ENST00000507408 FOXD1Q16676 465 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms