RNA–Protein interactions for RNA: ENST00000507282.1

LPCAT1-204, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 417 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-204ENST00000507282 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
LPCAT1-204ENST00000507282 CCDC180Q9P1Z9 1646 aa37.46■■■■□ 3.59
LPCAT1-204ENST00000507282 ABCC9O60706 1549 aa37.03■■■■□ 3.52
LPCAT1-204ENST00000507282 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
LPCAT1-204ENST00000507282 NACADO15069 1562 aa35.32■■■■□ 3.24
LPCAT1-204ENST00000507282 DCAF8L2P0C7V8 631 aa35.28■■■■□ 3.24
LPCAT1-204ENST00000507282 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
LPCAT1-204ENST00000507282 ZCCHC6Q5VYS8 1495 aaKnown RBP34.85■■■■□ 3.17
LPCAT1-204ENST00000507282 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
LPCAT1-204ENST00000507282 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
LPCAT1-204ENST00000507282 PABPN1Q86U42 306 aaKnown RBP eCLIP34.55■■■■□ 3.12
LPCAT1-204ENST00000507282 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
LPCAT1-204ENST00000507282 DNAJC5BQ9UF47 199 aa34.29■■■■□ 3.08
LPCAT1-204ENST00000507282 SCRIBQ14160 1630 aa34.16■■■■□ 3.06
LPCAT1-204ENST00000507282 SHROOM4Q9ULL8 1493 aa34■■■■□ 3.03
LPCAT1-204ENST00000507282 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.95
LPCAT1-204ENST00000507282 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
LPCAT1-204ENST00000507282 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
LPCAT1-204ENST00000507282 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
LPCAT1-204ENST00000507282 NCAPD3P42695 1498 aa32.59■■■□□ 2.81
LPCAT1-204ENST00000507282 BAZ1AQ9NRL2 1556 aaPredicted RBP32.56■■■□□ 2.8
LPCAT1-204ENST00000507282 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
LPCAT1-204ENST00000507282 SMARCA2P51531 1590 aa32.51■■■□□ 2.79
LPCAT1-204ENST00000507282 HMGXB3Q12766 1538 aa32.39■■■□□ 2.78
LPCAT1-204ENST00000507282 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
LPCAT1-204ENST00000507282 PEG3Q9GZU2 1588 aa32.3■■■□□ 2.76
LPCAT1-204ENST00000507282 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
LPCAT1-204ENST00000507282 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
LPCAT1-204ENST00000507282 WIZO95785 1651 aa31.95■■■□□ 2.7
LPCAT1-204ENST00000507282 NESP48681 1621 aa31.92■■■□□ 2.7
LPCAT1-204ENST00000507282 RSF1Q96T23 1441 aaPredicted RBP31.82■■■□□ 2.68
LPCAT1-204ENST00000507282 LAMC3Q9Y6N6 1575 aa31.8■■■□□ 2.68
LPCAT1-204ENST00000507282 CUX2O14529 1486 aa31.75■■■□□ 2.67
LPCAT1-204ENST00000507282 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
LPCAT1-204ENST00000507282 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
LPCAT1-204ENST00000507282 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
LPCAT1-204ENST00000507282 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
LPCAT1-204ENST00000507282 THOC2Q8NI27 1593 aaKnown RBP31.5■■■□□ 2.63
LPCAT1-204ENST00000507282 CFTRP13569 1480 aa31.35■■■□□ 2.61
LPCAT1-204ENST00000507282 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
LPCAT1-204ENST00000507282 FANCD2Q9BXW9 1451 aa31.27■■■□□ 2.6
LPCAT1-204ENST00000507282 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
LPCAT1-204ENST00000507282 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
LPCAT1-204ENST00000507282 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
LPCAT1-204ENST00000507282 WDR62O43379 1518 aa31.19■■■□□ 2.58
LPCAT1-204ENST00000507282 PRDM2Q13029 1718 aa31.08■■■□□ 2.57
LPCAT1-204ENST00000507282 URB2Q14146 1524 aaKnown RBP30.96■■■□□ 2.55
LPCAT1-204ENST00000507282 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
LPCAT1-204ENST00000507282 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
LPCAT1-204ENST00000507282 TOPBP1Q92547 1522 aa30.72■■■□□ 2.51
LPCAT1-204ENST00000507282 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
LPCAT1-204ENST00000507282 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
LPCAT1-204ENST00000507282 ZNF608Q9ULD9 1512 aaPredicted RBP30.51■■■□□ 2.47
LPCAT1-204ENST00000507282 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
LPCAT1-204ENST00000507282 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
LPCAT1-204ENST00000507282 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
LPCAT1-204ENST00000507282 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
LPCAT1-204ENST00000507282 CUX1P39880 1505 aa30.34■■■□□ 2.45
LPCAT1-204ENST00000507282 SOGA1O94964 1423 aa30.33■■■□□ 2.45
LPCAT1-204ENST00000507282 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
LPCAT1-204ENST00000507282 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
LPCAT1-204ENST00000507282 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
LPCAT1-204ENST00000507282 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
LPCAT1-204ENST00000507282 WDR97A6NE52 1622 aa30.15■■■□□ 2.42
LPCAT1-204ENST00000507282 FBLN2P98095 1184 aa30.07■■■□□ 2.4
LPCAT1-204ENST00000507282 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
LPCAT1-204ENST00000507282 CHD1O14646 1710 aa30.06■■■□□ 2.4
LPCAT1-204ENST00000507282 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
LPCAT1-204ENST00000507282 GRIN2BQ13224 1484 aa30.01■■■□□ 2.4
LPCAT1-204ENST00000507282 SNAPC4Q5SXM2 1469 aa30.01■■■□□ 2.4
LPCAT1-204ENST00000507282 ABCA10Q8WWZ4 1543 aa29.99■■■□□ 2.39
LPCAT1-204ENST00000507282 TOP2BQ02880 1626 aa29.99■■■□□ 2.39
LPCAT1-204ENST00000507282 BIVM-ERCC5R4GMW8 1640 aa29.98■■■□□ 2.39
LPCAT1-204ENST00000507282 MAGI1Q96QZ7 1491 aaPredicted RBP29.97■■■□□ 2.39
LPCAT1-204ENST00000507282 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
LPCAT1-204ENST00000507282 SYNJ1O43426 1573 aa29.95■■■□□ 2.39
LPCAT1-204ENST00000507282 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
LPCAT1-204ENST00000507282 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
LPCAT1-204ENST00000507282 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
LPCAT1-204ENST00000507282 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
LPCAT1-204ENST00000507282 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
LPCAT1-204ENST00000507282 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
LPCAT1-204ENST00000507282 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
LPCAT1-204ENST00000507282 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
LPCAT1-204ENST00000507282 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
LPCAT1-204ENST00000507282 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
LPCAT1-204ENST00000507282 ADAMTS12P58397 1594 aa29.64■■■□□ 2.34
LPCAT1-204ENST00000507282 ERICH3Q5RHP9 1530 aa29.64■■■□□ 2.34
LPCAT1-204ENST00000507282 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
LPCAT1-204ENST00000507282 FHAD1B1AJZ9 1412 aa29.61■■■□□ 2.33
LPCAT1-204ENST00000507282 ARAP1Q96P48 1450 aa29.59■■■□□ 2.33
LPCAT1-204ENST00000507282 NUP160Q12769 1436 aa29.49■■■□□ 2.31
LPCAT1-204ENST00000507282 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
LPCAT1-204ENST00000507282 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
LPCAT1-204ENST00000507282 IGF1RP08069 1367 aa29.35■■■□□ 2.29
LPCAT1-204ENST00000507282 CUL7Q14999 1698 aa29.3■■■□□ 2.28
LPCAT1-204ENST00000507282 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
LPCAT1-204ENST00000507282 ERCC6L2Q5T890 1561 aa29.27■■■□□ 2.28
LPCAT1-204ENST00000507282 JPH4Q96JJ6 628 aa29.22■■■□□ 2.27
LPCAT1-204ENST00000507282 RUSC2Q8N2Y8 1516 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms