RNA–Protein interactions for RNA: ENST00000507266.1

SDHA-207, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-207ENST00000507266 NISCHQ9Y2I1 1504 aa24.7■■□□□ 1.54
SDHA-207ENST00000507266 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
SDHA-207ENST00000507266 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
SDHA-207ENST00000507266 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
SDHA-207ENST00000507266 ABCC9O60706 1549 aa21.52■■□□□ 1.04
SDHA-207ENST00000507266 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
SDHA-207ENST00000507266 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
SDHA-207ENST00000507266 NACADO15069 1562 aa20.72■□□□□ 0.91
SDHA-207ENST00000507266 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
SDHA-207ENST00000507266 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
SDHA-207ENST00000507266 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
SDHA-207ENST00000507266 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
SDHA-207ENST00000507266 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
SDHA-207ENST00000507266 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
SDHA-207ENST00000507266 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
SDHA-207ENST00000507266 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
SDHA-207ENST00000507266 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
SDHA-207ENST00000507266 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
SDHA-207ENST00000507266 EIF4G1Q04637 1599 aaKnown RBP19.54■□□□□ 0.72
SDHA-207ENST00000507266 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
SDHA-207ENST00000507266 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
SDHA-207ENST00000507266 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
SDHA-207ENST00000507266 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
SDHA-207ENST00000507266 SMARCA4P51532 1647 aa19.2■□□□□ 0.66
SDHA-207ENST00000507266 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
SDHA-207ENST00000507266 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
SDHA-207ENST00000507266 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
SDHA-207ENST00000507266 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
SDHA-207ENST00000507266 HMGXB3Q12766 1538 aa19■□□□□ 0.63
SDHA-207ENST00000507266 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
SDHA-207ENST00000507266 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
SDHA-207ENST00000507266 WIZO95785 1651 aa18.87■□□□□ 0.61
SDHA-207ENST00000507266 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
SDHA-207ENST00000507266 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
SDHA-207ENST00000507266 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
SDHA-207ENST00000507266 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
SDHA-207ENST00000507266 NESP48681 1621 aa18.57■□□□□ 0.56
SDHA-207ENST00000507266 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
SDHA-207ENST00000507266 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
SDHA-207ENST00000507266 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
SDHA-207ENST00000507266 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
SDHA-207ENST00000507266 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
SDHA-207ENST00000507266 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
SDHA-207ENST00000507266 CUX2O14529 1486 aa18.4■□□□□ 0.54
SDHA-207ENST00000507266 FOXD1Q16676 465 aa18.4■□□□□ 0.54
SDHA-207ENST00000507266 CFTRP13569 1480 aa18.38■□□□□ 0.53
SDHA-207ENST00000507266 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
SDHA-207ENST00000507266 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
SDHA-207ENST00000507266 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
SDHA-207ENST00000507266 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
SDHA-207ENST00000507266 WDR62O43379 1518 aa18.19■□□□□ 0.5
SDHA-207ENST00000507266 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
SDHA-207ENST00000507266 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
SDHA-207ENST00000507266 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
SDHA-207ENST00000507266 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
SDHA-207ENST00000507266 IFT140Q96RY7 1462 aa17.94■□□□□ 0.46
SDHA-207ENST00000507266 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
SDHA-207ENST00000507266 CUX1P39880 1505 aa17.83■□□□□ 0.45
SDHA-207ENST00000507266 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
SDHA-207ENST00000507266 SOGA1O94964 1423 aa17.82■□□□□ 0.44
SDHA-207ENST00000507266 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
SDHA-207ENST00000507266 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
SDHA-207ENST00000507266 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
SDHA-207ENST00000507266 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
SDHA-207ENST00000507266 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
SDHA-207ENST00000507266 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
SDHA-207ENST00000507266 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
SDHA-207ENST00000507266 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
SDHA-207ENST00000507266 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
SDHA-207ENST00000507266 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.42
SDHA-207ENST00000507266 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
SDHA-207ENST00000507266 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
SDHA-207ENST00000507266 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
SDHA-207ENST00000507266 PBRM1Q86U86 1689 aa17.64■□□□□ 0.42
SDHA-207ENST00000507266 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
SDHA-207ENST00000507266 FBLN2P98095 1184 aa17.63■□□□□ 0.41
SDHA-207ENST00000507266 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
SDHA-207ENST00000507266 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
SDHA-207ENST00000507266 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
SDHA-207ENST00000507266 CHD1O14646 1710 aa17.61■□□□□ 0.41
SDHA-207ENST00000507266 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
SDHA-207ENST00000507266 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
SDHA-207ENST00000507266 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
SDHA-207ENST00000507266 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
SDHA-207ENST00000507266 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
SDHA-207ENST00000507266 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
SDHA-207ENST00000507266 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
SDHA-207ENST00000507266 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
SDHA-207ENST00000507266 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
SDHA-207ENST00000507266 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
SDHA-207ENST00000507266 CUL7Q14999 1698 aa17.37■□□□□ 0.37
SDHA-207ENST00000507266 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
SDHA-207ENST00000507266 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
SDHA-207ENST00000507266 RIMBP3BA6NNM3 1639 aa17.34■□□□□ 0.37
SDHA-207ENST00000507266 RIMBP3Q9UFD9 1639 aa17.34■□□□□ 0.37
SDHA-207ENST00000507266 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
SDHA-207ENST00000507266 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
SDHA-207ENST00000507266 IGF1RP08069 1367 aa17.28■□□□□ 0.36
SDHA-207ENST00000507266 MSH5O43196 834 aa17.27■□□□□ 0.36
SDHA-207ENST00000507266 CEP170Q5SW79 1584 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms