RNA–Protein interactions for RNA: ENST00000507177.5

SERF1B-205, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 5

Gene SERF1B, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-205ENST00000507177 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
SERF1B-205ENST00000507177 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
SERF1B-205ENST00000507177 ABCC9O60706 1549 aa33.81■■■■□ 3
SERF1B-205ENST00000507177 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
SERF1B-205ENST00000507177 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
SERF1B-205ENST00000507177 NACADO15069 1562 aa32.32■■■□□ 2.76
SERF1B-205ENST00000507177 ZCCHC6Q5VYS8 1495 aaKnown RBP32.11■■■□□ 2.73
SERF1B-205ENST00000507177 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
SERF1B-205ENST00000507177 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
SERF1B-205ENST00000507177 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
SERF1B-205ENST00000507177 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
SERF1B-205ENST00000507177 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
SERF1B-205ENST00000507177 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
SERF1B-205ENST00000507177 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
SERF1B-205ENST00000507177 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
SERF1B-205ENST00000507177 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
SERF1B-205ENST00000507177 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
SERF1B-205ENST00000507177 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
SERF1B-205ENST00000507177 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
SERF1B-205ENST00000507177 BAZ1AQ9NRL2 1556 aaPredicted RBP29.88■■■□□ 2.37
SERF1B-205ENST00000507177 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
SERF1B-205ENST00000507177 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
SERF1B-205ENST00000507177 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
SERF1B-205ENST00000507177 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
SERF1B-205ENST00000507177 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
SERF1B-205ENST00000507177 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
SERF1B-205ENST00000507177 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
SERF1B-205ENST00000507177 WIZO95785 1651 aa29.41■■■□□ 2.3
SERF1B-205ENST00000507177 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
SERF1B-205ENST00000507177 NESP48681 1621 aa29.23■■■□□ 2.27
SERF1B-205ENST00000507177 ERCC6Q03468 1493 aa29.1■■■□□ 2.25
SERF1B-205ENST00000507177 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
SERF1B-205ENST00000507177 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
SERF1B-205ENST00000507177 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
SERF1B-205ENST00000507177 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
SERF1B-205ENST00000507177 CUX2O14529 1486 aa28.85■■■□□ 2.21
SERF1B-205ENST00000507177 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
SERF1B-205ENST00000507177 CFTRP13569 1480 aa28.78■■■□□ 2.2
SERF1B-205ENST00000507177 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
SERF1B-205ENST00000507177 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
SERF1B-205ENST00000507177 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
SERF1B-205ENST00000507177 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
SERF1B-205ENST00000507177 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
SERF1B-205ENST00000507177 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
SERF1B-205ENST00000507177 WDR62O43379 1518 aa28.52■■■□□ 2.16
SERF1B-205ENST00000507177 PRDM2Q13029 1718 aa28.45■■■□□ 2.14
SERF1B-205ENST00000507177 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
SERF1B-205ENST00000507177 DNAJC5Q9H3Z4 198 aa28.21■■■□□ 2.11
SERF1B-205ENST00000507177 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
SERF1B-205ENST00000507177 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
SERF1B-205ENST00000507177 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
SERF1B-205ENST00000507177 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
SERF1B-205ENST00000507177 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
SERF1B-205ENST00000507177 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
SERF1B-205ENST00000507177 CUX1P39880 1505 aa27.92■■■□□ 2.06
SERF1B-205ENST00000507177 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
SERF1B-205ENST00000507177 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
SERF1B-205ENST00000507177 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
SERF1B-205ENST00000507177 SOGA1O94964 1423 aa27.82■■■□□ 2.04
SERF1B-205ENST00000507177 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.04
SERF1B-205ENST00000507177 EIF4G3O43432 1585 aaKnown RBP27.78■■■□□ 2.04
SERF1B-205ENST00000507177 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
SERF1B-205ENST00000507177 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
SERF1B-205ENST00000507177 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
SERF1B-205ENST00000507177 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
SERF1B-205ENST00000507177 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
SERF1B-205ENST00000507177 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
SERF1B-205ENST00000507177 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
SERF1B-205ENST00000507177 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
SERF1B-205ENST00000507177 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
SERF1B-205ENST00000507177 SNAPC4Q5SXM2 1469 aa27.49■■□□□ 1.99
SERF1B-205ENST00000507177 GAPVD1Q14C86 1478 aa27.48■■□□□ 1.99
SERF1B-205ENST00000507177 FBLN2P98095 1184 aa27.45■■□□□ 1.98
SERF1B-205ENST00000507177 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
SERF1B-205ENST00000507177 CHD1O14646 1710 aa27.44■■□□□ 1.98
SERF1B-205ENST00000507177 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
SERF1B-205ENST00000507177 PBRM1Q86U86 1689 aa27.38■■□□□ 1.97
SERF1B-205ENST00000507177 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
SERF1B-205ENST00000507177 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
SERF1B-205ENST00000507177 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
SERF1B-205ENST00000507177 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
SERF1B-205ENST00000507177 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
SERF1B-205ENST00000507177 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
SERF1B-205ENST00000507177 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
SERF1B-205ENST00000507177 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.94
SERF1B-205ENST00000507177 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
SERF1B-205ENST00000507177 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
SERF1B-205ENST00000507177 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
SERF1B-205ENST00000507177 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
SERF1B-205ENST00000507177 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
SERF1B-205ENST00000507177 IGF1RP08069 1367 aa27.06■■□□□ 1.92
SERF1B-205ENST00000507177 NUP160Q12769 1436 aa27.05■■□□□ 1.92
SERF1B-205ENST00000507177 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
SERF1B-205ENST00000507177 ARAP1Q96P48 1450 aa27■■□□□ 1.91
SERF1B-205ENST00000507177 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
SERF1B-205ENST00000507177 CUL7Q14999 1698 aa26.89■■□□□ 1.89
SERF1B-205ENST00000507177 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
SERF1B-205ENST00000507177 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
SERF1B-205ENST00000507177 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
SERF1B-205ENST00000507177 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms