RNA–Protein interactions for RNA: ENST00000507119.1

TRIM60-202, Transcript of tripartite motif containing 60, humanhuman

TSL 5

Gene TRIM60, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-202ENST00000507119 NISCHQ9Y2I1 1504 aa41.31■■■■■ 4.2
TRIM60-202ENST00000507119 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
TRIM60-202ENST00000507119 ABCC9O60706 1549 aa36.26■■■■□ 3.4
TRIM60-202ENST00000507119 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
TRIM60-202ENST00000507119 NACADO15069 1562 aa34.65■■■■□ 3.14
TRIM60-202ENST00000507119 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
TRIM60-202ENST00000507119 MYO15BQ96JP2 1530 aa34.41■■■■□ 3.1
TRIM60-202ENST00000507119 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
TRIM60-202ENST00000507119 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
TRIM60-202ENST00000507119 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.05
TRIM60-202ENST00000507119 BICRAQ9NZM4 1560 aa33.87■■■■□ 3.01
TRIM60-202ENST00000507119 PABPN1Q86U42 306 aaKnown RBP eCLIP33.86■■■■□ 3.01
TRIM60-202ENST00000507119 DNAJC5BQ9UF47 199 aa33.73■■■□□ 2.99
TRIM60-202ENST00000507119 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
TRIM60-202ENST00000507119 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
TRIM60-202ENST00000507119 EIF4G1Q04637 1599 aaKnown RBP32.88■■■□□ 2.85
TRIM60-202ENST00000507119 CC2D2AQ9P2K1 1620 aa32.82■■■□□ 2.84
TRIM60-202ENST00000507119 CECR2Q9BXF3 1484 aa32.6■■■□□ 2.81
TRIM60-202ENST00000507119 SMARCA4P51532 1647 aa32.09■■■□□ 2.73
TRIM60-202ENST00000507119 NCAPD3P42695 1498 aa32.04■■■□□ 2.72
TRIM60-202ENST00000507119 ATAD2BQ9ULI0 1458 aa32.01■■■□□ 2.71
TRIM60-202ENST00000507119 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
TRIM60-202ENST00000507119 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
TRIM60-202ENST00000507119 MROH2BQ7Z745 1585 aa31.86■■■□□ 2.69
TRIM60-202ENST00000507119 PEG3Q9GZU2 1588 aa31.84■■■□□ 2.69
TRIM60-202ENST00000507119 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
TRIM60-202ENST00000507119 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
TRIM60-202ENST00000507119 WIZO95785 1651 aa31.48■■■□□ 2.63
TRIM60-202ENST00000507119 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
TRIM60-202ENST00000507119 NESP48681 1621 aa31.37■■■□□ 2.61
TRIM60-202ENST00000507119 LAMC3Q9Y6N6 1575 aa31.16■■■□□ 2.58
TRIM60-202ENST00000507119 ERCC6Q03468 1493 aa31.14■■■□□ 2.57
TRIM60-202ENST00000507119 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
TRIM60-202ENST00000507119 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
TRIM60-202ENST00000507119 CUX2O14529 1486 aa31.01■■■□□ 2.56
TRIM60-202ENST00000507119 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
TRIM60-202ENST00000507119 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.54
TRIM60-202ENST00000507119 PDS5BQ9NTI5 1447 aa30.91■■■□□ 2.54
TRIM60-202ENST00000507119 CFTRP13569 1480 aa30.84■■■□□ 2.53
TRIM60-202ENST00000507119 CCDC88BA6NC98 1476 aa30.77■■■□□ 2.52
TRIM60-202ENST00000507119 FANCD2Q9BXW9 1451 aa30.67■■■□□ 2.5
TRIM60-202ENST00000507119 MRC2Q9UBG0 1479 aa30.65■■■□□ 2.5
TRIM60-202ENST00000507119 WDR62O43379 1518 aa30.62■■■□□ 2.49
TRIM60-202ENST00000507119 CEP164Q9UPV0 1460 aa30.61■■■□□ 2.49
TRIM60-202ENST00000507119 PRDM2Q13029 1718 aa30.53■■■□□ 2.48
TRIM60-202ENST00000507119 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
TRIM60-202ENST00000507119 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
TRIM60-202ENST00000507119 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
TRIM60-202ENST00000507119 TOPBP1Q92547 1522 aa30.18■■■□□ 2.42
TRIM60-202ENST00000507119 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
TRIM60-202ENST00000507119 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
TRIM60-202ENST00000507119 IFT140Q96RY7 1462 aa30■■■□□ 2.39
TRIM60-202ENST00000507119 ZNF608Q9ULD9 1512 aaPredicted RBP29.99■■■□□ 2.39
TRIM60-202ENST00000507119 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
TRIM60-202ENST00000507119 POLA1P09884 1462 aaPredicted RBP29.92■■■□□ 2.38
TRIM60-202ENST00000507119 CUX1P39880 1505 aa29.89■■■□□ 2.38
TRIM60-202ENST00000507119 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
TRIM60-202ENST00000507119 EIF4G3O43432 1585 aaKnown RBP29.79■■■□□ 2.36
TRIM60-202ENST00000507119 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
TRIM60-202ENST00000507119 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
TRIM60-202ENST00000507119 SOGA1O94964 1423 aa29.74■■■□□ 2.35
TRIM60-202ENST00000507119 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
TRIM60-202ENST00000507119 TDRD9Q8NDG6 1382 aaKnown RBP29.63■■■□□ 2.33
TRIM60-202ENST00000507119 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
TRIM60-202ENST00000507119 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
TRIM60-202ENST00000507119 SYNJ1O43426 1573 aa29.53■■■□□ 2.32
TRIM60-202ENST00000507119 TOP2BQ02880 1626 aa29.52■■■□□ 2.32
TRIM60-202ENST00000507119 WRNQ14191 1432 aaPredicted RBP eCLIP29.51■■■□□ 2.31
TRIM60-202ENST00000507119 ABCA10Q8WWZ4 1543 aa29.49■■■□□ 2.31
TRIM60-202ENST00000507119 CHD1O14646 1710 aa29.48■■■□□ 2.31
TRIM60-202ENST00000507119 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
TRIM60-202ENST00000507119 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
TRIM60-202ENST00000507119 GRIN2BQ13224 1484 aa29.41■■■□□ 2.3
TRIM60-202ENST00000507119 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
TRIM60-202ENST00000507119 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
TRIM60-202ENST00000507119 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
TRIM60-202ENST00000507119 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
TRIM60-202ENST00000507119 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
TRIM60-202ENST00000507119 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
TRIM60-202ENST00000507119 FBLN2P98095 1184 aa29.28■■■□□ 2.28
TRIM60-202ENST00000507119 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
TRIM60-202ENST00000507119 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
TRIM60-202ENST00000507119 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.27
TRIM60-202ENST00000507119 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
TRIM60-202ENST00000507119 TRIM41Q8WV44 630 aa29.19■■■□□ 2.26
TRIM60-202ENST00000507119 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
TRIM60-202ENST00000507119 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
TRIM60-202ENST00000507119 GRIN2AQ12879 1464 aa29.06■■■□□ 2.24
TRIM60-202ENST00000507119 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
TRIM60-202ENST00000507119 ARAP1Q96P48 1450 aa29.03■■■□□ 2.24
TRIM60-202ENST00000507119 NUP160Q12769 1436 aa28.99■■■□□ 2.23
TRIM60-202ENST00000507119 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
TRIM60-202ENST00000507119 CYB5RLQ6IPT4 315 aa28.93■■■□□ 2.22
TRIM60-202ENST00000507119 IGF1RP08069 1367 aa28.92■■■□□ 2.22
TRIM60-202ENST00000507119 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
TRIM60-202ENST00000507119 ERCC6L2Q5T890 1561 aa28.84■■■□□ 2.21
TRIM60-202ENST00000507119 SHROOM2Q13796 1616 aa28.82■■■□□ 2.2
TRIM60-202ENST00000507119 CUL7Q14999 1698 aa28.74■■■□□ 2.19
TRIM60-202ENST00000507119 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
TRIM60-202ENST00000507119 CARMIL1Q5VZK9 1371 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms