RNA–Protein interactions for RNA: ENST00000507096.1

CCDC149-205, Transcript of coiled-coil domain containing 149, humanhuman

TSL 3

Gene CCDC149, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-205ENST00000507096 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
CCDC149-205ENST00000507096 CCDC180Q9P1Z9 1646 aa30.89■■■□□ 2.54
CCDC149-205ENST00000507096 ABCC9O60706 1549 aa30.4■■■□□ 2.46
CCDC149-205ENST00000507096 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
CCDC149-205ENST00000507096 NACADO15069 1562 aa29.09■■■□□ 2.25
CCDC149-205ENST00000507096 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
CCDC149-205ENST00000507096 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
CCDC149-205ENST00000507096 ZCCHC6Q5VYS8 1495 aaKnown RBP28.74■■■□□ 2.19
CCDC149-205ENST00000507096 DCAF1Q9Y4B6 1507 aa28.63■■■□□ 2.17
CCDC149-205ENST00000507096 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
CCDC149-205ENST00000507096 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
CCDC149-205ENST00000507096 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
CCDC149-205ENST00000507096 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
CCDC149-205ENST00000507096 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
CCDC149-205ENST00000507096 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
CCDC149-205ENST00000507096 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
CCDC149-205ENST00000507096 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
CCDC149-205ENST00000507096 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
CCDC149-205ENST00000507096 SMARCA4P51532 1647 aa26.88■■□□□ 1.89
CCDC149-205ENST00000507096 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
CCDC149-205ENST00000507096 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
CCDC149-205ENST00000507096 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
CCDC149-205ENST00000507096 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
CCDC149-205ENST00000507096 HMGXB3Q12766 1538 aa26.7■■□□□ 1.86
CCDC149-205ENST00000507096 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
CCDC149-205ENST00000507096 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
CCDC149-205ENST00000507096 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
CCDC149-205ENST00000507096 WIZO95785 1651 aa26.3■■□□□ 1.8
CCDC149-205ENST00000507096 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
CCDC149-205ENST00000507096 NESP48681 1621 aa26.22■■□□□ 1.79
CCDC149-205ENST00000507096 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
CCDC149-205ENST00000507096 LAMC3Q9Y6N6 1575 aa26.17■■□□□ 1.78
CCDC149-205ENST00000507096 CUX2O14529 1486 aa26.1■■□□□ 1.77
CCDC149-205ENST00000507096 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
CCDC149-205ENST00000507096 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
CCDC149-205ENST00000507096 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
CCDC149-205ENST00000507096 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
CCDC149-205ENST00000507096 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
CCDC149-205ENST00000507096 CFTRP13569 1480 aa25.83■■□□□ 1.73
CCDC149-205ENST00000507096 MRC2Q9UBG0 1479 aa25.75■■□□□ 1.71
CCDC149-205ENST00000507096 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
CCDC149-205ENST00000507096 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
CCDC149-205ENST00000507096 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
CCDC149-205ENST00000507096 WDR62O43379 1518 aa25.68■■□□□ 1.7
CCDC149-205ENST00000507096 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
CCDC149-205ENST00000507096 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
CCDC149-205ENST00000507096 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
CCDC149-205ENST00000507096 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
CCDC149-205ENST00000507096 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
CCDC149-205ENST00000507096 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
CCDC149-205ENST00000507096 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
CCDC149-205ENST00000507096 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
CCDC149-205ENST00000507096 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
CCDC149-205ENST00000507096 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
CCDC149-205ENST00000507096 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
CCDC149-205ENST00000507096 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
CCDC149-205ENST00000507096 CUX1P39880 1505 aa24.99■■□□□ 1.59
CCDC149-205ENST00000507096 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
CCDC149-205ENST00000507096 SOGA1O94964 1423 aa24.94■■□□□ 1.58
CCDC149-205ENST00000507096 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
CCDC149-205ENST00000507096 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
CCDC149-205ENST00000507096 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.58
CCDC149-205ENST00000507096 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
CCDC149-205ENST00000507096 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
CCDC149-205ENST00000507096 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
CCDC149-205ENST00000507096 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
CCDC149-205ENST00000507096 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
CCDC149-205ENST00000507096 CHD1O14646 1710 aa24.72■■□□□ 1.55
CCDC149-205ENST00000507096 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
CCDC149-205ENST00000507096 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
CCDC149-205ENST00000507096 SNAPC4Q5SXM2 1469 aa24.68■■□□□ 1.54
CCDC149-205ENST00000507096 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
CCDC149-205ENST00000507096 MAGI1Q96QZ7 1491 aaPredicted RBP24.67■■□□□ 1.54
CCDC149-205ENST00000507096 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
CCDC149-205ENST00000507096 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
CCDC149-205ENST00000507096 FBLN2P98095 1184 aa24.62■■□□□ 1.53
CCDC149-205ENST00000507096 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
CCDC149-205ENST00000507096 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
CCDC149-205ENST00000507096 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
CCDC149-205ENST00000507096 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
CCDC149-205ENST00000507096 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
CCDC149-205ENST00000507096 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
CCDC149-205ENST00000507096 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
CCDC149-205ENST00000507096 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
CCDC149-205ENST00000507096 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
CCDC149-205ENST00000507096 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
CCDC149-205ENST00000507096 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
CCDC149-205ENST00000507096 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
CCDC149-205ENST00000507096 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
CCDC149-205ENST00000507096 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
CCDC149-205ENST00000507096 NUP160Q12769 1436 aa24.28■■□□□ 1.48
CCDC149-205ENST00000507096 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
CCDC149-205ENST00000507096 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
CCDC149-205ENST00000507096 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
CCDC149-205ENST00000507096 IGF1RP08069 1367 aa24.16■■□□□ 1.46
CCDC149-205ENST00000507096 CUL7Q14999 1698 aa24.15■■□□□ 1.46
CCDC149-205ENST00000507096 SHROOM2Q13796 1616 aa24.14■■□□□ 1.46
CCDC149-205ENST00000507096 RUSC2Q8N2Y8 1516 aa24.07■■□□□ 1.44
CCDC149-205ENST00000507096 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
CCDC149-205ENST00000507096 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms