RNA–Protein interactions for RNA: ENST00000507079.5

NFKB1-206, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-206ENST00000507079 NISCHQ9Y2I1 1504 aa47.62■■■■■ 5.21
NFKB1-206ENST00000507079 CCDC180Q9P1Z9 1646 aa42.47■■■■■ 4.39
NFKB1-206ENST00000507079 ABCC9O60706 1549 aa41.49■■■■■ 4.23
NFKB1-206ENST00000507079 RB1CC1Q8TDY2 1594 aa39.94■■■■□ 3.98
NFKB1-206ENST00000507079 NACADO15069 1562 aa39.87■■■■□ 3.97
NFKB1-206ENST00000507079 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
NFKB1-206ENST00000507079 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
NFKB1-206ENST00000507079 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
NFKB1-206ENST00000507079 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
NFKB1-206ENST00000507079 UNC13AQ9UPW8 1703 aa39.14■■■■□ 3.86
NFKB1-206ENST00000507079 BICRAQ9NZM4 1560 aa38.72■■■■□ 3.79
NFKB1-206ENST00000507079 SCRIBQ14160 1630 aa38.71■■■■□ 3.79
NFKB1-206ENST00000507079 PABPN1Q86U42 306 aaKnown RBP eCLIP38.68■■■■□ 3.78
NFKB1-206ENST00000507079 SHROOM4Q9ULL8 1493 aa38.32■■■■□ 3.72
NFKB1-206ENST00000507079 DNAJC5BQ9UF47 199 aa38.02■■■■□ 3.68
NFKB1-206ENST00000507079 EIF4G1Q04637 1599 aaKnown RBP37.7■■■■□ 3.63
NFKB1-206ENST00000507079 CC2D2AQ9P2K1 1620 aa37.58■■■■□ 3.61
NFKB1-206ENST00000507079 CECR2Q9BXF3 1484 aa37.27■■■■□ 3.56
NFKB1-206ENST00000507079 SMARCA4P51532 1647 aa37.02■■■■□ 3.52
NFKB1-206ENST00000507079 BAZ1AQ9NRL2 1556 aaPredicted RBP36.95■■■■□ 3.51
NFKB1-206ENST00000507079 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
NFKB1-206ENST00000507079 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
NFKB1-206ENST00000507079 NCAPD3P42695 1498 aa36.73■■■■□ 3.47
NFKB1-206ENST00000507079 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.46
NFKB1-206ENST00000507079 PEG3Q9GZU2 1588 aa36.64■■■■□ 3.46
NFKB1-206ENST00000507079 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
NFKB1-206ENST00000507079 BAZ1BQ9UIG0 1483 aaKnown RBP36.49■■■■□ 3.43
NFKB1-206ENST00000507079 WIZO95785 1651 aa36.35■■■■□ 3.41
NFKB1-206ENST00000507079 RSF1Q96T23 1441 aaPredicted RBP36.22■■■■□ 3.39
NFKB1-206ENST00000507079 TOP2AP11388 1531 aaKnown RBP35.95■■■■□ 3.35
NFKB1-206ENST00000507079 NESP48681 1621 aa35.89■■■■□ 3.34
NFKB1-206ENST00000507079 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
NFKB1-206ENST00000507079 ERCC6Q03468 1493 aa35.78■■■■□ 3.32
NFKB1-206ENST00000507079 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
NFKB1-206ENST00000507079 KIF21AQ7Z4S6 1674 aa35.58■■■■□ 3.29
NFKB1-206ENST00000507079 PDS5BQ9NTI5 1447 aa35.54■■■■□ 3.28
NFKB1-206ENST00000507079 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
NFKB1-206ENST00000507079 CFTRP13569 1480 aa35.45■■■■□ 3.27
NFKB1-206ENST00000507079 THOC2Q8NI27 1593 aaKnown RBP35.43■■■■□ 3.26
NFKB1-206ENST00000507079 CUX2O14529 1486 aa35.41■■■■□ 3.26
NFKB1-206ENST00000507079 PRDM2Q13029 1718 aa35.37■■■■□ 3.25
NFKB1-206ENST00000507079 FANCD2Q9BXW9 1451 aa35.28■■■■□ 3.24
NFKB1-206ENST00000507079 CEP164Q9UPV0 1460 aa35.26■■■■□ 3.23
NFKB1-206ENST00000507079 SUPT5HO00267 1087 aaKnown RBP35.24■■■■□ 3.23
NFKB1-206ENST00000507079 MRC2Q9UBG0 1479 aa35.21■■■■□ 3.23
NFKB1-206ENST00000507079 WDR62O43379 1518 aa35.12■■■■□ 3.21
NFKB1-206ENST00000507079 URB2Q14146 1524 aaKnown RBP34.93■■■■□ 3.18
NFKB1-206ENST00000507079 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
NFKB1-206ENST00000507079 ABCC8Q09428 1581 aa34.71■■■■□ 3.15
NFKB1-206ENST00000507079 DNMBPQ6XZF7 1577 aa34.71■■■■□ 3.15
NFKB1-206ENST00000507079 IFT140Q96RY7 1462 aa34.5■■■■□ 3.11
NFKB1-206ENST00000507079 CUX1P39880 1505 aa34.45■■■■□ 3.1
NFKB1-206ENST00000507079 POLA1P09884 1462 aaPredicted RBP34.41■■■■□ 3.1
NFKB1-206ENST00000507079 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
NFKB1-206ENST00000507079 ZNF608Q9ULD9 1512 aaPredicted RBP34.34■■■■□ 3.09
NFKB1-206ENST00000507079 FGD5Q6ZNL6 1462 aa34.33■■■■□ 3.09
NFKB1-206ENST00000507079 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
NFKB1-206ENST00000507079 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
NFKB1-206ENST00000507079 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
NFKB1-206ENST00000507079 SOGA1O94964 1423 aa34.23■■■■□ 3.07
NFKB1-206ENST00000507079 BIVM-ERCC5R4GMW8 1640 aa34.2■■■■□ 3.07
NFKB1-206ENST00000507079 WRNQ14191 1432 aaPredicted RBP eCLIP34.18■■■■□ 3.06
NFKB1-206ENST00000507079 TOP2BQ02880 1626 aa34.17■■■■□ 3.06
NFKB1-206ENST00000507079 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
NFKB1-206ENST00000507079 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
NFKB1-206ENST00000507079 AQRO60306 1485 aaKnown RBP eCLIP34.12■■■■□ 3.05
NFKB1-206ENST00000507079 TDRD9Q8NDG6 1382 aaKnown RBP34.03■■■■□ 3.04
NFKB1-206ENST00000507079 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
NFKB1-206ENST00000507079 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
NFKB1-206ENST00000507079 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
NFKB1-206ENST00000507079 CHD1O14646 1710 aa33.91■■■■□ 3.02
NFKB1-206ENST00000507079 GRIN2BQ13224 1484 aa33.87■■■■□ 3.01
NFKB1-206ENST00000507079 GAPVD1Q14C86 1478 aa33.87■■■■□ 3.01
NFKB1-206ENST00000507079 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
NFKB1-206ENST00000507079 SNAPC4Q5SXM2 1469 aa33.85■■■■□ 3.01
NFKB1-206ENST00000507079 MAGI1Q96QZ7 1491 aaPredicted RBP33.81■■■■□ 3
NFKB1-206ENST00000507079 FBLN2P98095 1184 aa33.7■■■□□ 2.99
NFKB1-206ENST00000507079 SYNJ2O15056 1496 aa33.67■■■□□ 2.98
NFKB1-206ENST00000507079 ADAMTS12P58397 1594 aa33.6■■■□□ 2.97
NFKB1-206ENST00000507079 ERICH3Q5RHP9 1530 aa33.6■■■□□ 2.97
NFKB1-206ENST00000507079 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
NFKB1-206ENST00000507079 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
NFKB1-206ENST00000507079 FHAD1B1AJZ9 1412 aa33.46■■■□□ 2.95
NFKB1-206ENST00000507079 CLASP1Q7Z460 1538 aa33.46■■■□□ 2.95
NFKB1-206ENST00000507079 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
NFKB1-206ENST00000507079 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
NFKB1-206ENST00000507079 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
NFKB1-206ENST00000507079 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
NFKB1-206ENST00000507079 ARHGEF11O15085 1522 aa33.4■■■□□ 2.94
NFKB1-206ENST00000507079 CUL7Q14999 1698 aa33.36■■■□□ 2.93
NFKB1-206ENST00000507079 CEP170Q5SW79 1584 aa33.31■■■□□ 2.92
NFKB1-206ENST00000507079 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
NFKB1-206ENST00000507079 NUP160Q12769 1436 aa33.28■■■□□ 2.92
NFKB1-206ENST00000507079 IGF1RP08069 1367 aa33.28■■■□□ 2.92
NFKB1-206ENST00000507079 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
NFKB1-206ENST00000507079 ARAP1Q96P48 1450 aa33.12■■■□□ 2.89
NFKB1-206ENST00000507079 CARMIL1Q5VZK9 1371 aa33.11■■■□□ 2.89
NFKB1-206ENST00000507079 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
NFKB1-206ENST00000507079 CYB5RLQ6IPT4 315 aa33■■■□□ 2.87
NFKB1-206ENST00000507079 ERCC6L2Q5T890 1561 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms