RNA–Protein interactions for RNA: ENST00000507067.1

CDK18-218, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 342 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-218ENST00000507067 NISCHQ9Y2I1 1504 aa43.47■■■■■ 4.55
CDK18-218ENST00000507067 CCDC180Q9P1Z9 1646 aa38.75■■■■□ 3.79
CDK18-218ENST00000507067 ABCC9O60706 1549 aa37.64■■■■□ 3.62
CDK18-218ENST00000507067 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
CDK18-218ENST00000507067 NACADO15069 1562 aa36.37■■■■□ 3.41
CDK18-218ENST00000507067 ZCCHC6Q5VYS8 1495 aaKnown RBP36.22■■■■□ 3.39
CDK18-218ENST00000507067 MYO15BQ96JP2 1530 aa36.2■■■■□ 3.39
CDK18-218ENST00000507067 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
CDK18-218ENST00000507067 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
CDK18-218ENST00000507067 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
CDK18-218ENST00000507067 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
CDK18-218ENST00000507067 BICRAQ9NZM4 1560 aa35.19■■■■□ 3.22
CDK18-218ENST00000507067 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
CDK18-218ENST00000507067 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
CDK18-218ENST00000507067 DNAJC5BQ9UF47 199 aa34.38■■■■□ 3.09
CDK18-218ENST00000507067 EIF4G1Q04637 1599 aaKnown RBP34.29■■■■□ 3.08
CDK18-218ENST00000507067 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
CDK18-218ENST00000507067 CECR2Q9BXF3 1484 aa33.86■■■■□ 3.01
CDK18-218ENST00000507067 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
CDK18-218ENST00000507067 SMARCA4P51532 1647 aa33.74■■■□□ 2.99
CDK18-218ENST00000507067 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
CDK18-218ENST00000507067 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
CDK18-218ENST00000507067 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
CDK18-218ENST00000507067 PEG3Q9GZU2 1588 aa33.45■■■□□ 2.95
CDK18-218ENST00000507067 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
CDK18-218ENST00000507067 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
CDK18-218ENST00000507067 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
CDK18-218ENST00000507067 WIZO95785 1651 aa33.13■■■□□ 2.89
CDK18-218ENST00000507067 RSF1Q96T23 1441 aaPredicted RBP33.08■■■□□ 2.89
CDK18-218ENST00000507067 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
CDK18-218ENST00000507067 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
CDK18-218ENST00000507067 NESP48681 1621 aa32.57■■■□□ 2.8
CDK18-218ENST00000507067 ERCC6Q03468 1493 aa32.51■■■□□ 2.79
CDK18-218ENST00000507067 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
CDK18-218ENST00000507067 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
CDK18-218ENST00000507067 CCDC88BA6NC98 1476 aa32.36■■■□□ 2.77
CDK18-218ENST00000507067 CFTRP13569 1480 aa32.34■■■□□ 2.77
CDK18-218ENST00000507067 KIF21AQ7Z4S6 1674 aa32.33■■■□□ 2.77
CDK18-218ENST00000507067 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
CDK18-218ENST00000507067 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
CDK18-218ENST00000507067 CUX2O14529 1486 aa32.2■■■□□ 2.75
CDK18-218ENST00000507067 THOC2Q8NI27 1593 aaKnown RBP32.18■■■□□ 2.74
CDK18-218ENST00000507067 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
CDK18-218ENST00000507067 CEP164Q9UPV0 1460 aa32.11■■■□□ 2.73
CDK18-218ENST00000507067 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
CDK18-218ENST00000507067 WDR62O43379 1518 aa31.95■■■□□ 2.71
CDK18-218ENST00000507067 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.68
CDK18-218ENST00000507067 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
CDK18-218ENST00000507067 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.66
CDK18-218ENST00000507067 TOPBP1Q92547 1522 aa31.62■■■□□ 2.65
CDK18-218ENST00000507067 IFT140Q96RY7 1462 aa31.45■■■□□ 2.62
CDK18-218ENST00000507067 CUX1P39880 1505 aa31.38■■■□□ 2.61
CDK18-218ENST00000507067 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
CDK18-218ENST00000507067 TARBP1Q13395 1621 aaKnown RBP31.3■■■□□ 2.6
CDK18-218ENST00000507067 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
CDK18-218ENST00000507067 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
CDK18-218ENST00000507067 SOGA1O94964 1423 aa31.23■■■□□ 2.59
CDK18-218ENST00000507067 WRNQ14191 1432 aaPredicted RBP eCLIP31.23■■■□□ 2.59
CDK18-218ENST00000507067 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
CDK18-218ENST00000507067 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
CDK18-218ENST00000507067 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
CDK18-218ENST00000507067 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
CDK18-218ENST00000507067 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
CDK18-218ENST00000507067 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
CDK18-218ENST00000507067 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
CDK18-218ENST00000507067 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.56
CDK18-218ENST00000507067 ABCA10Q8WWZ4 1543 aa31.02■■■□□ 2.56
CDK18-218ENST00000507067 TDRD9Q8NDG6 1382 aaKnown RBP30.97■■■□□ 2.55
CDK18-218ENST00000507067 PBRM1Q86U86 1689 aa30.91■■■□□ 2.54
CDK18-218ENST00000507067 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
CDK18-218ENST00000507067 GRIN2BQ13224 1484 aa30.89■■■□□ 2.53
CDK18-218ENST00000507067 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.53
CDK18-218ENST00000507067 MAGI1Q96QZ7 1491 aaPredicted RBP30.83■■■□□ 2.53
CDK18-218ENST00000507067 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
CDK18-218ENST00000507067 CHD1O14646 1710 aa30.81■■■□□ 2.52
CDK18-218ENST00000507067 SNAPC4Q5SXM2 1469 aa30.79■■■□□ 2.52
CDK18-218ENST00000507067 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
CDK18-218ENST00000507067 SYNJ2O15056 1496 aa30.68■■■□□ 2.5
CDK18-218ENST00000507067 FBLN2P98095 1184 aa30.65■■■□□ 2.5
CDK18-218ENST00000507067 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
CDK18-218ENST00000507067 KIF27Q86VH2 1401 aa30.6■■■□□ 2.49
CDK18-218ENST00000507067 ADAMTS12P58397 1594 aa30.59■■■□□ 2.49
CDK18-218ENST00000507067 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
CDK18-218ENST00000507067 TRIM41Q8WV44 630 aa30.51■■■□□ 2.47
CDK18-218ENST00000507067 CUL7Q14999 1698 aa30.48■■■□□ 2.47
CDK18-218ENST00000507067 GRIN2AQ12879 1464 aa30.47■■■□□ 2.47
CDK18-218ENST00000507067 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
CDK18-218ENST00000507067 IGF1RP08069 1367 aa30.4■■■□□ 2.46
CDK18-218ENST00000507067 RIMBP3CA6NJZ7 1639 aa30.34■■■□□ 2.45
CDK18-218ENST00000507067 RIMBP3BA6NNM3 1639 aa30.34■■■□□ 2.45
CDK18-218ENST00000507067 RIMBP3Q9UFD9 1639 aa30.34■■■□□ 2.45
CDK18-218ENST00000507067 NUP160Q12769 1436 aa30.33■■■□□ 2.45
CDK18-218ENST00000507067 ARHGEF11O15085 1522 aa30.32■■■□□ 2.44
CDK18-218ENST00000507067 CEP170Q5SW79 1584 aa30.3■■■□□ 2.44
CDK18-218ENST00000507067 CARMIL1Q5VZK9 1371 aa30.26■■■□□ 2.43
CDK18-218ENST00000507067 RUSC2Q8N2Y8 1516 aa30.22■■■□□ 2.43
CDK18-218ENST00000507067 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
CDK18-218ENST00000507067 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
CDK18-218ENST00000507067 EEA1Q15075 1411 aa30.12■■■□□ 2.41
CDK18-218ENST00000507067 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms