RNA–Protein interactions for RNA: ENST00000507054.1

RGMB-205, Transcript of repulsive guidance molecule BMP co-receptor b, humanhuman

TSL 5

Gene RGMB, Length 300 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMB-205ENST00000507054 NISCHQ9Y2I1 1504 aa49.91■■■■■ 5.58
RGMB-205ENST00000507054 CCDC180Q9P1Z9 1646 aa44.34■■■■■ 4.69
RGMB-205ENST00000507054 ABCC9O60706 1549 aa44.09■■■■■ 4.65
RGMB-205ENST00000507054 DNAJC5BQ9UF47 199 aa41.76■■■■■ 4.28
RGMB-205ENST00000507054 RB1CC1Q8TDY2 1594 aa41.74■■■■■ 4.27
RGMB-205ENST00000507054 DCAF8L2P0C7V8 631 aa41.64■■■■■ 4.26
RGMB-205ENST00000507054 NACADO15069 1562 aa41.63■■■■■ 4.25
RGMB-205ENST00000507054 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
RGMB-205ENST00000507054 MYO15BQ96JP2 1530 aa41.4■■■■■ 4.22
RGMB-205ENST00000507054 DCAF1Q9Y4B6 1507 aa41.29■■■■■ 4.2
RGMB-205ENST00000507054 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.16
RGMB-205ENST00000507054 UNC13AQ9UPW8 1703 aa40.89■■■■■ 4.14
RGMB-205ENST00000507054 BICRAQ9NZM4 1560 aa40.69■■■■■ 4.11
RGMB-205ENST00000507054 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
RGMB-205ENST00000507054 SHROOM4Q9ULL8 1493 aa39.94■■■■□ 3.98
RGMB-205ENST00000507054 CC2D2AQ9P2K1 1620 aa39.8■■■■□ 3.96
RGMB-205ENST00000507054 CECR2Q9BXF3 1484 aa39.72■■■■□ 3.95
RGMB-205ENST00000507054 EIF4G1Q04637 1599 aaKnown RBP39.64■■■■□ 3.94
RGMB-205ENST00000507054 SMARCA4P51532 1647 aa38.72■■■■□ 3.79
RGMB-205ENST00000507054 BAZ1AQ9NRL2 1556 aaPredicted RBP38.66■■■■□ 3.78
RGMB-205ENST00000507054 MROH2BQ7Z745 1585 aa38.48■■■■□ 3.75
RGMB-205ENST00000507054 ATAD2BQ9ULI0 1458 aa38.45■■■■□ 3.75
RGMB-205ENST00000507054 DNAJC5Q9H3Z4 198 aa38.44■■■■□ 3.74
RGMB-205ENST00000507054 SMARCA2P51531 1590 aa38.41■■■■□ 3.74
RGMB-205ENST00000507054 NCAPD3P42695 1498 aa38.41■■■■□ 3.74
RGMB-205ENST00000507054 PEG3Q9GZU2 1588 aa38.32■■■■□ 3.73
RGMB-205ENST00000507054 HMGXB3Q12766 1538 aa38.23■■■■□ 3.71
RGMB-205ENST00000507054 BAZ1BQ9UIG0 1483 aaKnown RBP38.14■■■■□ 3.7
RGMB-205ENST00000507054 WIZO95785 1651 aa38.11■■■■□ 3.69
RGMB-205ENST00000507054 RSF1Q96T23 1441 aaPredicted RBP38.07■■■■□ 3.69
RGMB-205ENST00000507054 CUX2O14529 1486 aa38.06■■■■□ 3.68
RGMB-205ENST00000507054 ERCC6Q03468 1493 aa37.97■■■■□ 3.67
RGMB-205ENST00000507054 NESP48681 1621 aa37.84■■■■□ 3.65
RGMB-205ENST00000507054 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
RGMB-205ENST00000507054 THOC2Q8NI27 1593 aaKnown RBP37.49■■■■□ 3.59
RGMB-205ENST00000507054 LAMC3Q9Y6N6 1575 aa37.41■■■■□ 3.58
RGMB-205ENST00000507054 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
RGMB-205ENST00000507054 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
RGMB-205ENST00000507054 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
RGMB-205ENST00000507054 CCDC88BA6NC98 1476 aa37.23■■■■□ 3.55
RGMB-205ENST00000507054 PDS5BQ9NTI5 1447 aa37.17■■■■□ 3.54
RGMB-205ENST00000507054 CFTRP13569 1480 aa37.1■■■■□ 3.53
RGMB-205ENST00000507054 MRC2Q9UBG0 1479 aa36.92■■■■□ 3.5
RGMB-205ENST00000507054 PRDM2Q13029 1718 aa36.91■■■■□ 3.5
RGMB-205ENST00000507054 WDR62O43379 1518 aa36.87■■■■□ 3.49
RGMB-205ENST00000507054 FANCD2Q9BXW9 1451 aa36.87■■■■□ 3.49
RGMB-205ENST00000507054 CEP164Q9UPV0 1460 aa36.81■■■■□ 3.48
RGMB-205ENST00000507054 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
RGMB-205ENST00000507054 URB2Q14146 1524 aaKnown RBP36.51■■■■□ 3.44
RGMB-205ENST00000507054 TOPBP1Q92547 1522 aa36.31■■■■□ 3.4
RGMB-205ENST00000507054 ABCC8Q09428 1581 aa36.28■■■■□ 3.4
RGMB-205ENST00000507054 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
RGMB-205ENST00000507054 OSCARQ8IYS5 282 aa36.24■■■■□ 3.39
RGMB-205ENST00000507054 CUX1P39880 1505 aa36.09■■■■□ 3.37
RGMB-205ENST00000507054 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
RGMB-205ENST00000507054 IFT140Q96RY7 1462 aa36.02■■■■□ 3.36
RGMB-205ENST00000507054 POLA1P09884 1462 aaPredicted RBP36■■■■□ 3.35
RGMB-205ENST00000507054 FGD5Q6ZNL6 1462 aa35.93■■■■□ 3.34
RGMB-205ENST00000507054 TARBP1Q13395 1621 aaKnown RBP35.93■■■■□ 3.34
RGMB-205ENST00000507054 RIMBP3CA6NJZ7 1639 aa35.89■■■■□ 3.34
RGMB-205ENST00000507054 RIMBP3BA6NNM3 1639 aa35.89■■■■□ 3.34
RGMB-205ENST00000507054 RIMBP3Q9UFD9 1639 aa35.89■■■■□ 3.34
RGMB-205ENST00000507054 WRNQ14191 1432 aaPredicted RBP eCLIP35.89■■■■□ 3.34
RGMB-205ENST00000507054 RAD54L2Q9Y4B4 1467 aa35.86■■■■□ 3.33
RGMB-205ENST00000507054 SOGA1O94964 1423 aa35.85■■■■□ 3.33
RGMB-205ENST00000507054 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
RGMB-205ENST00000507054 SYNJ1O43426 1573 aa35.82■■■■□ 3.32
RGMB-205ENST00000507054 TOP2BQ02880 1626 aa35.82■■■■□ 3.32
RGMB-205ENST00000507054 EIF4G3O43432 1585 aaKnown RBP35.78■■■■□ 3.32
RGMB-205ENST00000507054 ARHGEF11O15085 1522 aa35.74■■■■□ 3.31
RGMB-205ENST00000507054 AQRO60306 1485 aaKnown RBP eCLIP35.68■■■■□ 3.3
RGMB-205ENST00000507054 WDR97A6NE52 1622 aa35.68■■■■□ 3.3
RGMB-205ENST00000507054 TDRD9Q8NDG6 1382 aaKnown RBP35.64■■■■□ 3.3
RGMB-205ENST00000507054 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
RGMB-205ENST00000507054 CHD1O14646 1710 aa35.56■■■■□ 3.28
RGMB-205ENST00000507054 ABCA5Q8WWZ7 1642 aa35.46■■■■□ 3.27
RGMB-205ENST00000507054 CYB5RLQ6IPT4 315 aa35.45■■■■□ 3.27
RGMB-205ENST00000507054 GAPVD1Q14C86 1478 aa35.44■■■■□ 3.26
RGMB-205ENST00000507054 PBRM1Q86U86 1689 aa35.41■■■■□ 3.26
RGMB-205ENST00000507054 GRIN2BQ13224 1484 aa35.41■■■■□ 3.26
RGMB-205ENST00000507054 ARAP1Q96P48 1450 aa35.41■■■■□ 3.26
RGMB-205ENST00000507054 FBLN2P98095 1184 aa35.37■■■■□ 3.25
RGMB-205ENST00000507054 SNAPC4Q5SXM2 1469 aa35.35■■■■□ 3.25
RGMB-205ENST00000507054 MAGI1Q96QZ7 1491 aaPredicted RBP35.3■■■■□ 3.24
RGMB-205ENST00000507054 CLASP1Q7Z460 1538 aa35.2■■■■□ 3.23
RGMB-205ENST00000507054 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
RGMB-205ENST00000507054 SYNJ2O15056 1496 aa35.16■■■■□ 3.22
RGMB-205ENST00000507054 CHMP7Q8WUX9 453 aaPredicted RBP35.13■■■■□ 3.21
RGMB-205ENST00000507054 KIF27Q86VH2 1401 aa35.12■■■■□ 3.21
RGMB-205ENST00000507054 ADAMTS12P58397 1594 aa35.1■■■■□ 3.21
RGMB-205ENST00000507054 TRHP20396 242 aaPredicted RBP35.08■■■■□ 3.21
RGMB-205ENST00000507054 FHAD1B1AJZ9 1412 aa35.02■■■■□ 3.2
RGMB-205ENST00000507054 CHIC1Q5VXU3 224 aa35.01■■■■□ 3.2
RGMB-205ENST00000507054 IGF1RP08069 1367 aa34.98■■■■□ 3.19
RGMB-205ENST00000507054 GRIN2AQ12879 1464 aa34.97■■■■□ 3.19
RGMB-205ENST00000507054 RUSC2Q8N2Y8 1516 aa34.9■■■■□ 3.18
RGMB-205ENST00000507054 CUL7Q14999 1698 aa34.89■■■■□ 3.18
RGMB-205ENST00000507054 CEP170Q5SW79 1584 aa34.81■■■■□ 3.16
RGMB-205ENST00000507054 NUP160Q12769 1436 aa34.8■■■■□ 3.16
RGMB-205ENST00000507054 CARMIL1Q5VZK9 1371 aa34.76■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms