RNA–Protein interactions for RNA: ENST00000507012.1

RERE-217, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-217ENST00000507012 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
RERE-217ENST00000507012 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
RERE-217ENST00000507012 ABCC9O60706 1549 aa23.49■■□□□ 1.35
RERE-217ENST00000507012 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
RERE-217ENST00000507012 NACADO15069 1562 aa22.58■■□□□ 1.2
RERE-217ENST00000507012 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
RERE-217ENST00000507012 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
RERE-217ENST00000507012 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
RERE-217ENST00000507012 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
RERE-217ENST00000507012 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
RERE-217ENST00000507012 PABPN1Q86U42 306 aaKnown RBP eCLIP21.89■■□□□ 1.09
RERE-217ENST00000507012 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
RERE-217ENST00000507012 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
RERE-217ENST00000507012 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
RERE-217ENST00000507012 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
RERE-217ENST00000507012 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
RERE-217ENST00000507012 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
RERE-217ENST00000507012 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
RERE-217ENST00000507012 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
RERE-217ENST00000507012 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
RERE-217ENST00000507012 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
RERE-217ENST00000507012 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
RERE-217ENST00000507012 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
RERE-217ENST00000507012 HMGXB3Q12766 1538 aa20.71■□□□□ 0.91
RERE-217ENST00000507012 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
RERE-217ENST00000507012 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
RERE-217ENST00000507012 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
RERE-217ENST00000507012 WIZO95785 1651 aa20.37■□□□□ 0.85
RERE-217ENST00000507012 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
RERE-217ENST00000507012 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
RERE-217ENST00000507012 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
RERE-217ENST00000507012 NESP48681 1621 aa20.24■□□□□ 0.83
RERE-217ENST00000507012 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
RERE-217ENST00000507012 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
RERE-217ENST00000507012 CUX2O14529 1486 aa20.19■□□□□ 0.82
RERE-217ENST00000507012 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
RERE-217ENST00000507012 CFTRP13569 1480 aa20.05■□□□□ 0.8
RERE-217ENST00000507012 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
RERE-217ENST00000507012 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
RERE-217ENST00000507012 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
RERE-217ENST00000507012 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
RERE-217ENST00000507012 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
RERE-217ENST00000507012 FANCD2Q9BXW9 1451 aa19.94■□□□□ 0.78
RERE-217ENST00000507012 WDR62O43379 1518 aa19.88■□□□□ 0.77
RERE-217ENST00000507012 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
RERE-217ENST00000507012 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
RERE-217ENST00000507012 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
RERE-217ENST00000507012 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
RERE-217ENST00000507012 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
RERE-217ENST00000507012 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
RERE-217ENST00000507012 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
RERE-217ENST00000507012 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
RERE-217ENST00000507012 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
RERE-217ENST00000507012 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
RERE-217ENST00000507012 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
RERE-217ENST00000507012 CUX1P39880 1505 aa19.37■□□□□ 0.69
RERE-217ENST00000507012 SOGA1O94964 1423 aa19.35■□□□□ 0.69
RERE-217ENST00000507012 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
RERE-217ENST00000507012 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
RERE-217ENST00000507012 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
RERE-217ENST00000507012 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
RERE-217ENST00000507012 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
RERE-217ENST00000507012 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.673e-9■■□□□ 14.5
RERE-217ENST00000507012 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
RERE-217ENST00000507012 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
RERE-217ENST00000507012 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
RERE-217ENST00000507012 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
RERE-217ENST00000507012 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
RERE-217ENST00000507012 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
RERE-217ENST00000507012 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
RERE-217ENST00000507012 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
RERE-217ENST00000507012 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
RERE-217ENST00000507012 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
RERE-217ENST00000507012 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
RERE-217ENST00000507012 CHD1O14646 1710 aa19.09■□□□□ 0.65
RERE-217ENST00000507012 FBLN2P98095 1184 aa19.08■□□□□ 0.64
RERE-217ENST00000507012 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
RERE-217ENST00000507012 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
RERE-217ENST00000507012 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
RERE-217ENST00000507012 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
RERE-217ENST00000507012 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
RERE-217ENST00000507012 RIMBP3CA6NJZ7 1639 aa18.95■□□□□ 0.62
RERE-217ENST00000507012 RIMBP3BA6NNM3 1639 aa18.95■□□□□ 0.62
RERE-217ENST00000507012 RIMBP3Q9UFD9 1639 aa18.95■□□□□ 0.62
RERE-217ENST00000507012 FHAD1B1AJZ9 1412 aa18.93■□□□□ 0.62
RERE-217ENST00000507012 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
RERE-217ENST00000507012 CLASP1Q7Z460 1538 aa18.92■□□□□ 0.62
RERE-217ENST00000507012 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
RERE-217ENST00000507012 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
RERE-217ENST00000507012 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
RERE-217ENST00000507012 NUP160Q12769 1436 aa18.83■□□□□ 0.61
RERE-217ENST00000507012 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
RERE-217ENST00000507012 CUL7Q14999 1698 aa18.77■□□□□ 0.6
RERE-217ENST00000507012 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
RERE-217ENST00000507012 IGF1RP08069 1367 aa18.77■□□□□ 0.6
RERE-217ENST00000507012 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
RERE-217ENST00000507012 SHROOM2Q13796 1616 aa18.69■□□□□ 0.58
RERE-217ENST00000507012 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
RERE-217ENST00000507012 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
RERE-217ENST00000507012 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms