RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
SIL1-209ENST00000507002 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
SIL1-209ENST00000507002 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
SIL1-209ENST00000507002 ABCC9O60706 1549 aa23.84■■□□□ 1.41
SIL1-209ENST00000507002 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
SIL1-209ENST00000507002 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
SIL1-209ENST00000507002 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
SIL1-209ENST00000507002 NACADO15069 1562 aa23.48■■□□□ 1.35
SIL1-209ENST00000507002 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
SIL1-209ENST00000507002 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
SIL1-209ENST00000507002 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
SIL1-209ENST00000507002 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
SIL1-209ENST00000507002 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
SIL1-209ENST00000507002 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
SIL1-209ENST00000507002 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
SIL1-209ENST00000507002 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
SIL1-209ENST00000507002 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
SIL1-209ENST00000507002 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
SIL1-209ENST00000507002 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
SIL1-209ENST00000507002 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
SIL1-209ENST00000507002 WIZO95785 1651 aa22.1■■□□□ 1.13
SIL1-209ENST00000507002 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
SIL1-209ENST00000507002 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
SIL1-209ENST00000507002 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
SIL1-209ENST00000507002 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
SIL1-209ENST00000507002 ATAD2BQ9ULI0 1458 aa21.82■■□□□ 1.08
SIL1-209ENST00000507002 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
SIL1-209ENST00000507002 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
SIL1-209ENST00000507002 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
SIL1-209ENST00000507002 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
SIL1-209ENST00000507002 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
SIL1-209ENST00000507002 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
SIL1-209ENST00000507002 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
SIL1-209ENST00000507002 ABCC8Q09428 1581 aa21.14■□□□□ 0.98
SIL1-209ENST00000507002 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
SIL1-209ENST00000507002 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
SIL1-209ENST00000507002 CFTRP13569 1480 aa21.13■□□□□ 0.97
SIL1-209ENST00000507002 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
SIL1-209ENST00000507002 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
SIL1-209ENST00000507002 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
SIL1-209ENST00000507002 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
SIL1-209ENST00000507002 NESP48681 1621 aa20.92■□□□□ 0.94
SIL1-209ENST00000507002 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
SIL1-209ENST00000507002 TOP2BQ02880 1626 aa20.87■□□□□ 0.93
SIL1-209ENST00000507002 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
SIL1-209ENST00000507002 CUX1P39880 1505 aa20.83■□□□□ 0.93
SIL1-209ENST00000507002 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
SIL1-209ENST00000507002 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
SIL1-209ENST00000507002 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
SIL1-209ENST00000507002 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
SIL1-209ENST00000507002 SOGA1O94964 1423 aa20.7■□□□□ 0.9
SIL1-209ENST00000507002 EEA1Q15075 1411 aa20.68■□□□□ 0.9
SIL1-209ENST00000507002 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
SIL1-209ENST00000507002 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
SIL1-209ENST00000507002 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
SIL1-209ENST00000507002 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
SIL1-209ENST00000507002 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
SIL1-209ENST00000507002 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
SIL1-209ENST00000507002 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
SIL1-209ENST00000507002 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
SIL1-209ENST00000507002 MRC2Q9UBG0 1479 aa20.51■□□□□ 0.87
SIL1-209ENST00000507002 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
SIL1-209ENST00000507002 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
SIL1-209ENST00000507002 CUX2O14529 1486 aa20.45■□□□□ 0.86
SIL1-209ENST00000507002 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
SIL1-209ENST00000507002 KIF21BO75037 1637 aa20.45■□□□□ 0.86
SIL1-209ENST00000507002 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
SIL1-209ENST00000507002 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
SIL1-209ENST00000507002 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
SIL1-209ENST00000507002 WDR62O43379 1518 aa20.41■□□□□ 0.86
SIL1-209ENST00000507002 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
SIL1-209ENST00000507002 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
SIL1-209ENST00000507002 TARBP1Q13395 1621 aaKnown RBP20.34■□□□□ 0.85
SIL1-209ENST00000507002 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
SIL1-209ENST00000507002 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
SIL1-209ENST00000507002 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
SIL1-209ENST00000507002 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
SIL1-209ENST00000507002 ABCA5Q8WWZ7 1642 aa20.29■□□□□ 0.84
SIL1-209ENST00000507002 IGF1RP08069 1367 aa20.29■□□□□ 0.84
SIL1-209ENST00000507002 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
SIL1-209ENST00000507002 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
SIL1-209ENST00000507002 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
SIL1-209ENST00000507002 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
SIL1-209ENST00000507002 CUL7Q14999 1698 aa20.21■□□□□ 0.83
SIL1-209ENST00000507002 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
SIL1-209ENST00000507002 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
SIL1-209ENST00000507002 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
SIL1-209ENST00000507002 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
SIL1-209ENST00000507002 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
SIL1-209ENST00000507002 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
SIL1-209ENST00000507002 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
SIL1-209ENST00000507002 CLIP1P30622 1438 aa20.05■□□□□ 0.8
SIL1-209ENST00000507002 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
SIL1-209ENST00000507002 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
SIL1-209ENST00000507002 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
SIL1-209ENST00000507002 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
SIL1-209ENST00000507002 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
SIL1-209ENST00000507002 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
SIL1-209ENST00000507002 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
SIL1-209ENST00000507002 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms