RNA–Protein interactions for RNA: ENST00000506957.1

MRPS27-203, Transcript of mitochondrial ribosomal protein S27, humanhuman

TSL 4

Gene MRPS27, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS27-203ENST00000506957 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
MRPS27-203ENST00000506957 ABCC9O60706 1549 aa32.87■■■□□ 2.85
MRPS27-203ENST00000506957 CCDC180Q9P1Z9 1646 aa31.92■■■□□ 2.7
MRPS27-203ENST00000506957 DNAJC5BQ9UF47 199 aa31.62■■■□□ 2.65
MRPS27-203ENST00000506957 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
MRPS27-203ENST00000506957 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
MRPS27-203ENST00000506957 NACADO15069 1562 aa30.35■■■□□ 2.45
MRPS27-203ENST00000506957 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
MRPS27-203ENST00000506957 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
MRPS27-203ENST00000506957 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
MRPS27-203ENST00000506957 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
MRPS27-203ENST00000506957 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
MRPS27-203ENST00000506957 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
MRPS27-203ENST00000506957 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
MRPS27-203ENST00000506957 DCAF1Q9Y4B6 1507 aa29.47■■■□□ 2.31
MRPS27-203ENST00000506957 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
MRPS27-203ENST00000506957 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
MRPS27-203ENST00000506957 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
MRPS27-203ENST00000506957 SCRIBQ14160 1630 aa29.18■■■□□ 2.26
MRPS27-203ENST00000506957 CUX2O14529 1486 aa28.51■■■□□ 2.15
MRPS27-203ENST00000506957 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
MRPS27-203ENST00000506957 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
MRPS27-203ENST00000506957 NESP48681 1621 aa28.04■■■□□ 2.08
MRPS27-203ENST00000506957 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
MRPS27-203ENST00000506957 ATAD2BQ9ULI0 1458 aa27.91■■■□□ 2.06
MRPS27-203ENST00000506957 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
MRPS27-203ENST00000506957 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
MRPS27-203ENST00000506957 SMARCA2P51531 1590 aa27.71■■■□□ 2.03
MRPS27-203ENST00000506957 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
MRPS27-203ENST00000506957 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
MRPS27-203ENST00000506957 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
MRPS27-203ENST00000506957 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
MRPS27-203ENST00000506957 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
MRPS27-203ENST00000506957 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
MRPS27-203ENST00000506957 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.97
MRPS27-203ENST00000506957 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
MRPS27-203ENST00000506957 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
MRPS27-203ENST00000506957 WDR62O43379 1518 aa27.23■■□□□ 1.95
MRPS27-203ENST00000506957 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
MRPS27-203ENST00000506957 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
MRPS27-203ENST00000506957 WIZO95785 1651 aa27.1■■□□□ 1.93
MRPS27-203ENST00000506957 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
MRPS27-203ENST00000506957 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
MRPS27-203ENST00000506957 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
MRPS27-203ENST00000506957 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
MRPS27-203ENST00000506957 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
MRPS27-203ENST00000506957 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
MRPS27-203ENST00000506957 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
MRPS27-203ENST00000506957 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
MRPS27-203ENST00000506957 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
MRPS27-203ENST00000506957 CFTRP13569 1480 aa26.7■■□□□ 1.87
MRPS27-203ENST00000506957 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
MRPS27-203ENST00000506957 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
MRPS27-203ENST00000506957 CYB5RLQ6IPT4 315 aa26.6■■□□□ 1.85
MRPS27-203ENST00000506957 TRHP20396 242 aaPredicted RBP26.55■■□□□ 1.84
MRPS27-203ENST00000506957 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
MRPS27-203ENST00000506957 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
MRPS27-203ENST00000506957 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
MRPS27-203ENST00000506957 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
MRPS27-203ENST00000506957 CHD1O14646 1710 aa26.38■■□□□ 1.81
MRPS27-203ENST00000506957 PRDM2Q13029 1718 aa26.37■■□□□ 1.81
MRPS27-203ENST00000506957 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
MRPS27-203ENST00000506957 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
MRPS27-203ENST00000506957 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
MRPS27-203ENST00000506957 FBLN2P98095 1184 aa26.22■■□□□ 1.79
MRPS27-203ENST00000506957 TARBP1Q13395 1621 aaKnown RBP26.16■■□□□ 1.78
MRPS27-203ENST00000506957 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
MRPS27-203ENST00000506957 ABCC8Q09428 1581 aa26.05■■□□□ 1.76
MRPS27-203ENST00000506957 POLA1P09884 1462 aaPredicted RBP26.01■■□□□ 1.75
MRPS27-203ENST00000506957 CLASP1Q7Z460 1538 aa26.01■■□□□ 1.75
MRPS27-203ENST00000506957 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
MRPS27-203ENST00000506957 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
MRPS27-203ENST00000506957 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.74
MRPS27-203ENST00000506957 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
MRPS27-203ENST00000506957 SOGA1O94964 1423 aa25.84■■□□□ 1.73
MRPS27-203ENST00000506957 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
MRPS27-203ENST00000506957 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
MRPS27-203ENST00000506957 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
MRPS27-203ENST00000506957 MAGI1Q96QZ7 1491 aaPredicted RBP25.74■■□□□ 1.71
MRPS27-203ENST00000506957 CUX1P39880 1505 aa25.71■■□□□ 1.71
MRPS27-203ENST00000506957 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
MRPS27-203ENST00000506957 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
MRPS27-203ENST00000506957 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
MRPS27-203ENST00000506957 ERCC6L2Q5T890 1561 aa25.67■■□□□ 1.7
MRPS27-203ENST00000506957 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
MRPS27-203ENST00000506957 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
MRPS27-203ENST00000506957 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
MRPS27-203ENST00000506957 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
MRPS27-203ENST00000506957 KIF13AQ9H1H9 1805 aa25.49■■□□□ 1.67
MRPS27-203ENST00000506957 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
MRPS27-203ENST00000506957 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
MRPS27-203ENST00000506957 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
MRPS27-203ENST00000506957 GRIN2AQ12879 1464 aa25.39■■□□□ 1.65
MRPS27-203ENST00000506957 ILDR1Q86SU0 546 aaPredicted RBP25.37■■□□□ 1.65
MRPS27-203ENST00000506957 NUP160Q12769 1436 aa25.32■■□□□ 1.64
MRPS27-203ENST00000506957 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
MRPS27-203ENST00000506957 ADAMTS12P58397 1594 aa25.3■■□□□ 1.64
MRPS27-203ENST00000506957 KDM4FA0A1W2PPD8 638 aa25.29■■□□□ 1.64
MRPS27-203ENST00000506957 FAM69CQ0P6D2 419 aa25.22■■□□□ 1.63
MRPS27-203ENST00000506957 ABCC10Q5T3U5 1492 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms