RNA–Protein interactions for RNA: ENST00000506840.5

GAR1-204, Transcript of GAR1 ribonucleoprotein, humanhuman

TSL 2

Gene GAR1, Length 831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1-204ENST00000506840 NISCHQ9Y2I1 1504 aa48.72■■■■■ 5.39
GAR1-204ENST00000506840 CCDC180Q9P1Z9 1646 aa43.47■■■■■ 4.55
GAR1-204ENST00000506840 ABCC9O60706 1549 aa42.86■■■■■ 4.45
GAR1-204ENST00000506840 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
GAR1-204ENST00000506840 NACADO15069 1562 aa40.95■■■■■ 4.15
GAR1-204ENST00000506840 DCAF8L2P0C7V8 631 aa40.9■■■■■ 4.14
GAR1-204ENST00000506840 MYO15BQ96JP2 1530 aa40.57■■■■■ 4.08
GAR1-204ENST00000506840 ZCCHC6Q5VYS8 1495 aaKnown RBP40.52■■■■■ 4.08
GAR1-204ENST00000506840 DCAF1Q9Y4B6 1507 aa40.27■■■■■ 4.04
GAR1-204ENST00000506840 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
GAR1-204ENST00000506840 PABPN1Q86U42 306 aaKnown RBP eCLIP39.99■■■■□ 3.99
GAR1-204ENST00000506840 BICRAQ9NZM4 1560 aa39.8■■■■□ 3.96
GAR1-204ENST00000506840 SCRIBQ14160 1630 aa39.66■■■■□ 3.94
GAR1-204ENST00000506840 DNAJC5BQ9UF47 199 aa39.56■■■■□ 3.92
GAR1-204ENST00000506840 SHROOM4Q9ULL8 1493 aa39.39■■■■□ 3.9
GAR1-204ENST00000506840 EIF4G1Q04637 1599 aaKnown RBP38.82■■■■□ 3.8
GAR1-204ENST00000506840 CC2D2AQ9P2K1 1620 aa38.74■■■■□ 3.79
GAR1-204ENST00000506840 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
GAR1-204ENST00000506840 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
GAR1-204ENST00000506840 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
GAR1-204ENST00000506840 NCAPD3P42695 1498 aa37.77■■■■□ 3.64
GAR1-204ENST00000506840 ATAD2BQ9ULI0 1458 aa37.75■■■■□ 3.63
GAR1-204ENST00000506840 SMARCA2P51531 1590 aa37.71■■■■□ 3.63
GAR1-204ENST00000506840 HMGXB3Q12766 1538 aa37.56■■■■□ 3.6
GAR1-204ENST00000506840 MROH2BQ7Z745 1585 aa37.54■■■■□ 3.6
GAR1-204ENST00000506840 PEG3Q9GZU2 1588 aa37.5■■■■□ 3.59
GAR1-204ENST00000506840 BAZ1BQ9UIG0 1483 aaKnown RBP37.46■■■■□ 3.59
GAR1-204ENST00000506840 WIZO95785 1651 aa37.13■■■■□ 3.53
GAR1-204ENST00000506840 ERCC6Q03468 1493 aa37.01■■■■□ 3.51
GAR1-204ENST00000506840 RSF1Q96T23 1441 aaPredicted RBP37■■■■□ 3.51
GAR1-204ENST00000506840 NESP48681 1621 aa36.97■■■■□ 3.51
GAR1-204ENST00000506840 LAMC3Q9Y6N6 1575 aa36.84■■■■□ 3.49
GAR1-204ENST00000506840 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
GAR1-204ENST00000506840 CUX2O14529 1486 aa36.68■■■■□ 3.46
GAR1-204ENST00000506840 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
GAR1-204ENST00000506840 PDS5BQ9NTI5 1447 aa36.62■■■■□ 3.45
GAR1-204ENST00000506840 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
GAR1-204ENST00000506840 THOC2Q8NI27 1593 aaKnown RBP36.48■■■■□ 3.43
GAR1-204ENST00000506840 CFTRP13569 1480 aa36.37■■■■□ 3.41
GAR1-204ENST00000506840 CCDC88BA6NC98 1476 aa36.28■■■■□ 3.4
GAR1-204ENST00000506840 FANCD2Q9BXW9 1451 aa36.26■■■■□ 3.4
GAR1-204ENST00000506840 MRC2Q9UBG0 1479 aa36.26■■■■□ 3.4
GAR1-204ENST00000506840 CEP164Q9UPV0 1460 aa36.25■■■■□ 3.39
GAR1-204ENST00000506840 WDR62O43379 1518 aa36.14■■■■□ 3.38
GAR1-204ENST00000506840 PRDM2Q13029 1718 aa36.08■■■■□ 3.37
GAR1-204ENST00000506840 DNAJC5Q9H3Z4 198 aa35.9■■■■□ 3.34
GAR1-204ENST00000506840 URB2Q14146 1524 aaKnown RBP35.89■■■■□ 3.34
GAR1-204ENST00000506840 SUPT5HO00267 1087 aaKnown RBP35.88■■■■□ 3.33
GAR1-204ENST00000506840 TOPBP1Q92547 1522 aa35.64■■■■□ 3.3
GAR1-204ENST00000506840 ABCC8Q09428 1581 aa35.63■■■■□ 3.29
GAR1-204ENST00000506840 DNMBPQ6XZF7 1577 aa35.58■■■■□ 3.29
GAR1-204ENST00000506840 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
GAR1-204ENST00000506840 ZNF608Q9ULD9 1512 aaPredicted RBP35.35■■■■□ 3.25
GAR1-204ENST00000506840 POLA1P09884 1462 aaPredicted RBP35.31■■■■□ 3.24
GAR1-204ENST00000506840 TARBP1Q13395 1621 aaKnown RBP35.24■■■■□ 3.23
GAR1-204ENST00000506840 CUX1P39880 1505 aa35.24■■■■□ 3.23
GAR1-204ENST00000506840 EIF4G3O43432 1585 aaKnown RBP35.22■■■■□ 3.23
GAR1-204ENST00000506840 FGD5Q6ZNL6 1462 aa35.2■■■■□ 3.23
GAR1-204ENST00000506840 SOGA1O94964 1423 aa35.17■■■■□ 3.22
GAR1-204ENST00000506840 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
GAR1-204ENST00000506840 AQRO60306 1485 aaKnown RBP eCLIP35.12■■■■□ 3.211e-6■□□□□ 10.8
GAR1-204ENST00000506840 OSCARQ8IYS5 282 aa35.11■■■■□ 3.21
GAR1-204ENST00000506840 TDRD9Q8NDG6 1382 aaKnown RBP35.01■■■■□ 3.2
GAR1-204ENST00000506840 WDR97A6NE52 1622 aa34.98■■■■□ 3.19
GAR1-204ENST00000506840 WRNQ14191 1432 aaPredicted RBP eCLIP34.92■■■■□ 3.18
GAR1-204ENST00000506840 TOP2BQ02880 1626 aa34.86■■■■□ 3.17
GAR1-204ENST00000506840 BIVM-ERCC5R4GMW8 1640 aa34.85■■■■□ 3.17
GAR1-204ENST00000506840 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
GAR1-204ENST00000506840 CHD1O14646 1710 aa34.83■■■■□ 3.17
GAR1-204ENST00000506840 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
GAR1-204ENST00000506840 FBLN2P98095 1184 aa34.81■■■■□ 3.16
GAR1-204ENST00000506840 SNAPC4Q5SXM2 1469 aa34.81■■■■□ 3.16
GAR1-204ENST00000506840 GRIN2BQ13224 1484 aa34.8■■■■□ 3.16
GAR1-204ENST00000506840 GAPVD1Q14C86 1478 aa34.76■■■■□ 3.15
GAR1-204ENST00000506840 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
GAR1-204ENST00000506840 ABCA5Q8WWZ7 1642 aa34.71■■■■□ 3.15
GAR1-204ENST00000506840 PBRM1Q86U86 1689 aa34.71■■■■□ 3.15
GAR1-204ENST00000506840 CHMP7Q8WUX9 453 aaPredicted RBP34.65■■■■□ 3.14
GAR1-204ENST00000506840 TRIM41Q8WV44 630 aa34.65■■■■□ 3.14
GAR1-204ENST00000506840 SYNJ2O15056 1496 aa34.62■■■■□ 3.13
GAR1-204ENST00000506840 RIMBP3CA6NJZ7 1639 aa34.57■■■■□ 3.12
GAR1-204ENST00000506840 RIMBP3BA6NNM3 1639 aa34.57■■■■□ 3.12
GAR1-204ENST00000506840 RIMBP3Q9UFD9 1639 aa34.57■■■■□ 3.12
GAR1-204ENST00000506840 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
GAR1-204ENST00000506840 CLASP1Q7Z460 1538 aa34.43■■■■□ 3.1
GAR1-204ENST00000506840 ADAMTS12P58397 1594 aa34.42■■■■□ 3.1
GAR1-204ENST00000506840 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
GAR1-204ENST00000506840 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
GAR1-204ENST00000506840 FHAD1B1AJZ9 1412 aa34.35■■■■□ 3.09
GAR1-204ENST00000506840 CYB5RLQ6IPT4 315 aa34.25■■■■□ 3.07
GAR1-204ENST00000506840 KIF27Q86VH2 1401 aa34.23■■■■□ 3.07
GAR1-204ENST00000506840 ARAP1Q96P48 1450 aa34.23■■■■□ 3.07
GAR1-204ENST00000506840 NUP160Q12769 1436 aa34.2■■■■□ 3.06
GAR1-204ENST00000506840 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
GAR1-204ENST00000506840 IGF1RP08069 1367 aa34.09■■■■□ 3.05
GAR1-204ENST00000506840 CUL7Q14999 1698 aa34.05■■■■□ 3.04
GAR1-204ENST00000506840 SHROOM2Q13796 1616 aa33.97■■■■□ 3.03
GAR1-204ENST00000506840 ERCC6L2Q5T890 1561 aa33.93■■■■□ 3.02
GAR1-204ENST00000506840 RUSC2Q8N2Y8 1516 aa33.92■■■■□ 3.02
GAR1-204ENST00000506840 CARMIL1Q5VZK9 1371 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms