RNA–Protein interactions for RNA: ENST00000506772.2

HMGN2P4-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 4, humanhuman

BASIC

Gene HMGN2P4, Length 381 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P4-201ENST00000506772 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
HMGN2P4-201ENST00000506772 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
HMGN2P4-201ENST00000506772 ABCC9O60706 1549 aa23.38■■□□□ 1.33
HMGN2P4-201ENST00000506772 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
HMGN2P4-201ENST00000506772 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
HMGN2P4-201ENST00000506772 NACADO15069 1562 aa22.33■■□□□ 1.17
HMGN2P4-201ENST00000506772 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
HMGN2P4-201ENST00000506772 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
HMGN2P4-201ENST00000506772 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
HMGN2P4-201ENST00000506772 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
HMGN2P4-201ENST00000506772 UNC13AQ9UPW8 1703 aa21.71■■□□□ 1.07
HMGN2P4-201ENST00000506772 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
HMGN2P4-201ENST00000506772 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
HMGN2P4-201ENST00000506772 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
HMGN2P4-201ENST00000506772 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
HMGN2P4-201ENST00000506772 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
HMGN2P4-201ENST00000506772 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
HMGN2P4-201ENST00000506772 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
HMGN2P4-201ENST00000506772 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
HMGN2P4-201ENST00000506772 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
HMGN2P4-201ENST00000506772 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
HMGN2P4-201ENST00000506772 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
HMGN2P4-201ENST00000506772 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
HMGN2P4-201ENST00000506772 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
HMGN2P4-201ENST00000506772 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
HMGN2P4-201ENST00000506772 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
HMGN2P4-201ENST00000506772 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
HMGN2P4-201ENST00000506772 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
HMGN2P4-201ENST00000506772 WIZO95785 1651 aa20.12■□□□□ 0.81
HMGN2P4-201ENST00000506772 RSF1Q96T23 1441 aaPredicted RBP20.11■□□□□ 0.81
HMGN2P4-201ENST00000506772 NESP48681 1621 aa20.1■□□□□ 0.81
HMGN2P4-201ENST00000506772 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
HMGN2P4-201ENST00000506772 CUX2O14529 1486 aa20.1■□□□□ 0.81
HMGN2P4-201ENST00000506772 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
HMGN2P4-201ENST00000506772 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
HMGN2P4-201ENST00000506772 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
HMGN2P4-201ENST00000506772 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
HMGN2P4-201ENST00000506772 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.76
HMGN2P4-201ENST00000506772 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
HMGN2P4-201ENST00000506772 CFTRP13569 1480 aa19.81■□□□□ 0.76
HMGN2P4-201ENST00000506772 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
HMGN2P4-201ENST00000506772 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
HMGN2P4-201ENST00000506772 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
HMGN2P4-201ENST00000506772 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
HMGN2P4-201ENST00000506772 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
HMGN2P4-201ENST00000506772 WDR62O43379 1518 aa19.68■□□□□ 0.74
HMGN2P4-201ENST00000506772 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
HMGN2P4-201ENST00000506772 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
HMGN2P4-201ENST00000506772 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
HMGN2P4-201ENST00000506772 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
HMGN2P4-201ENST00000506772 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
HMGN2P4-201ENST00000506772 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
HMGN2P4-201ENST00000506772 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
HMGN2P4-201ENST00000506772 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
HMGN2P4-201ENST00000506772 SOGA1O94964 1423 aa19.21■□□□□ 0.67
HMGN2P4-201ENST00000506772 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
HMGN2P4-201ENST00000506772 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.66
HMGN2P4-201ENST00000506772 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
HMGN2P4-201ENST00000506772 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
HMGN2P4-201ENST00000506772 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
HMGN2P4-201ENST00000506772 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
HMGN2P4-201ENST00000506772 CUX1P39880 1505 aa19.12■□□□□ 0.65
HMGN2P4-201ENST00000506772 FBLN2P98095 1184 aa19.1■□□□□ 0.65
HMGN2P4-201ENST00000506772 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
HMGN2P4-201ENST00000506772 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
HMGN2P4-201ENST00000506772 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
HMGN2P4-201ENST00000506772 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
HMGN2P4-201ENST00000506772 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
HMGN2P4-201ENST00000506772 GRIN2BQ13224 1484 aa19■□□□□ 0.63
HMGN2P4-201ENST00000506772 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
HMGN2P4-201ENST00000506772 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
HMGN2P4-201ENST00000506772 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
HMGN2P4-201ENST00000506772 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
HMGN2P4-201ENST00000506772 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
HMGN2P4-201ENST00000506772 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
HMGN2P4-201ENST00000506772 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
HMGN2P4-201ENST00000506772 CHD1O14646 1710 aa18.91■□□□□ 0.62
HMGN2P4-201ENST00000506772 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
HMGN2P4-201ENST00000506772 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
HMGN2P4-201ENST00000506772 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
HMGN2P4-201ENST00000506772 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
HMGN2P4-201ENST00000506772 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
HMGN2P4-201ENST00000506772 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
HMGN2P4-201ENST00000506772 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
HMGN2P4-201ENST00000506772 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.61
HMGN2P4-201ENST00000506772 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
HMGN2P4-201ENST00000506772 FHAD1B1AJZ9 1412 aa18.75■□□□□ 0.59
HMGN2P4-201ENST00000506772 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
HMGN2P4-201ENST00000506772 CLASP1Q7Z460 1538 aa18.73■□□□□ 0.59
HMGN2P4-201ENST00000506772 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
HMGN2P4-201ENST00000506772 ADAMTS12P58397 1594 aa18.69■□□□□ 0.58
HMGN2P4-201ENST00000506772 KIF27Q86VH2 1401 aa18.67■□□□□ 0.58
HMGN2P4-201ENST00000506772 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
HMGN2P4-201ENST00000506772 EEA1Q15075 1411 aa18.65■□□□□ 0.58
HMGN2P4-201ENST00000506772 NUP160Q12769 1436 aa18.63■□□□□ 0.57
HMGN2P4-201ENST00000506772 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
HMGN2P4-201ENST00000506772 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
HMGN2P4-201ENST00000506772 IGF1RP08069 1367 aa18.56■□□□□ 0.56
HMGN2P4-201ENST00000506772 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
HMGN2P4-201ENST00000506772 CUL7Q14999 1698 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms