RNA–Protein interactions for RNA: ENST00000506697.5

SPOCK3-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-209ENST00000506697 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
SPOCK3-209ENST00000506697 ABCC9O60706 1549 aa42.7■■■■■ 4.43
SPOCK3-209ENST00000506697 CCDC180Q9P1Z9 1646 aa41.6■■■■■ 4.25
SPOCK3-209ENST00000506697 DNAJC5BQ9UF47 199 aa41■■■■■ 4.15
SPOCK3-209ENST00000506697 RB1CC1Q8TDY2 1594 aa40.15■■■■■ 4.02
SPOCK3-209ENST00000506697 PABPN1Q86U42 306 aaKnown RBP eCLIP39.65■■■■□ 3.94
SPOCK3-209ENST00000506697 NACADO15069 1562 aa39.64■■■■□ 3.94
SPOCK3-209ENST00000506697 DCAF8L2P0C7V8 631 aa39.37■■■■□ 3.89
SPOCK3-209ENST00000506697 UNC13AQ9UPW8 1703 aa39.09■■■■□ 3.85
SPOCK3-209ENST00000506697 BICRAQ9NZM4 1560 aa39■■■■□ 3.83
SPOCK3-209ENST00000506697 MYO15BQ96JP2 1530 aa38.78■■■■□ 3.8
SPOCK3-209ENST00000506697 CECR2Q9BXF3 1484 aa38.58■■■■□ 3.77
SPOCK3-209ENST00000506697 CC2D2AQ9P2K1 1620 aa38.46■■■■□ 3.75
SPOCK3-209ENST00000506697 DNAJC5Q9H3Z4 198 aa38.44■■■■□ 3.74
SPOCK3-209ENST00000506697 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
SPOCK3-209ENST00000506697 EIF4G1Q04637 1599 aaKnown RBP38.14■■■■□ 3.7
SPOCK3-209ENST00000506697 DCAF1Q9Y4B6 1507 aa37.91■■■■□ 3.66
SPOCK3-209ENST00000506697 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
SPOCK3-209ENST00000506697 ZCCHC6Q5VYS8 1495 aaKnown RBP37.87■■■■□ 3.65
SPOCK3-209ENST00000506697 CUX2O14529 1486 aa37.2■■■■□ 3.54
SPOCK3-209ENST00000506697 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
SPOCK3-209ENST00000506697 NCAPD3P42695 1498 aa36.66■■■■□ 3.46
SPOCK3-209ENST00000506697 ATAD2BQ9ULI0 1458 aa36.39■■■■□ 3.42
SPOCK3-209ENST00000506697 NESP48681 1621 aa36.38■■■■□ 3.41
SPOCK3-209ENST00000506697 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
SPOCK3-209ENST00000506697 HMGXB3Q12766 1538 aa36.24■■■■□ 3.39
SPOCK3-209ENST00000506697 SMARCA2P51531 1590 aa36.21■■■■□ 3.39
SPOCK3-209ENST00000506697 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
SPOCK3-209ENST00000506697 SMARCA4P51532 1647 aa36.04■■■■□ 3.36
SPOCK3-209ENST00000506697 BAZ1BQ9UIG0 1483 aaKnown RBP35.98■■■■□ 3.35
SPOCK3-209ENST00000506697 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
SPOCK3-209ENST00000506697 PDS5BQ9NTI5 1447 aa35.83■■■■□ 3.33
SPOCK3-209ENST00000506697 KIF21AQ7Z4S6 1674 aa35.77■■■■□ 3.32
SPOCK3-209ENST00000506697 BAZ1AQ9NRL2 1556 aaPredicted RBP35.75■■■■□ 3.31
SPOCK3-209ENST00000506697 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.31
SPOCK3-209ENST00000506697 MRC2Q9UBG0 1479 aa35.55■■■■□ 3.28
SPOCK3-209ENST00000506697 CADPSQ9ULU8 1353 aa35.51■■■■□ 3.28
SPOCK3-209ENST00000506697 WDR62O43379 1518 aa35.46■■■■□ 3.27
SPOCK3-209ENST00000506697 OSCARQ8IYS5 282 aa35.42■■■■□ 3.26
SPOCK3-209ENST00000506697 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
SPOCK3-209ENST00000506697 CEP164Q9UPV0 1460 aa35.2■■■■□ 3.23
SPOCK3-209ENST00000506697 FANCD2Q9BXW9 1451 aa35.09■■■■□ 3.21
SPOCK3-209ENST00000506697 RIMBP3CA6NJZ7 1639 aa34.94■■■■□ 3.18
SPOCK3-209ENST00000506697 RIMBP3BA6NNM3 1639 aa34.94■■■■□ 3.18
SPOCK3-209ENST00000506697 RIMBP3Q9UFD9 1639 aa34.94■■■■□ 3.18
SPOCK3-209ENST00000506697 WIZO95785 1651 aa34.89■■■■□ 3.18
SPOCK3-209ENST00000506697 CFTRP13569 1480 aa34.87■■■■□ 3.17
SPOCK3-209ENST00000506697 URB2Q14146 1524 aaKnown RBP34.85■■■■□ 3.17
SPOCK3-209ENST00000506697 ARHGEF11O15085 1522 aa34.76■■■■□ 3.16
SPOCK3-209ENST00000506697 CYB5RLQ6IPT4 315 aa34.66■■■■□ 3.14
SPOCK3-209ENST00000506697 TRHP20396 242 aaPredicted RBP34.62■■■■□ 3.13
SPOCK3-209ENST00000506697 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
SPOCK3-209ENST00000506697 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
SPOCK3-209ENST00000506697 AEBP2Q6ZN18 517 aaPredicted RBP34.46■■■■□ 3.11
SPOCK3-209ENST00000506697 TOP2AP11388 1531 aaKnown RBP34.41■■■■□ 3.1
SPOCK3-209ENST00000506697 ARAP1Q96P48 1450 aa34.36■■■■□ 3.09
SPOCK3-209ENST00000506697 RSF1Q96T23 1441 aaPredicted RBP34.36■■■■□ 3.09
SPOCK3-209ENST00000506697 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
SPOCK3-209ENST00000506697 EIF4G3O43432 1585 aaKnown RBP34.28■■■■□ 3.08
SPOCK3-209ENST00000506697 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
SPOCK3-209ENST00000506697 FBLN2P98095 1184 aa34.22■■■■□ 3.07
SPOCK3-209ENST00000506697 AQRO60306 1485 aaKnown RBP eCLIP34.18■■■■□ 3.06
SPOCK3-209ENST00000506697 CHD1O14646 1710 aa34.17■■■■□ 3.06
SPOCK3-209ENST00000506697 ABCC8Q09428 1581 aa34.17■■■■□ 3.06
SPOCK3-209ENST00000506697 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.05
SPOCK3-209ENST00000506697 DNMBPQ6XZF7 1577 aa34.05■■■■□ 3.04
SPOCK3-209ENST00000506697 TARBP1Q13395 1621 aaKnown RBP34.01■■■■□ 3.04
SPOCK3-209ENST00000506697 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
SPOCK3-209ENST00000506697 TDRD9Q8NDG6 1382 aaKnown RBP33.84■■■■□ 3.01
SPOCK3-209ENST00000506697 CLASP1Q7Z460 1538 aa33.83■■■■□ 3.01
SPOCK3-209ENST00000506697 RAD54L2Q9Y4B4 1467 aa33.8■■■■□ 3
SPOCK3-209ENST00000506697 CHMP7Q8WUX9 453 aaPredicted RBP33.79■■■■□ 3
SPOCK3-209ENST00000506697 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
SPOCK3-209ENST00000506697 SNAPC4Q5SXM2 1469 aa33.76■■■■□ 3
SPOCK3-209ENST00000506697 SOGA1O94964 1423 aa33.76■■■□□ 2.99
SPOCK3-209ENST00000506697 SYNJ1O43426 1573 aa33.73■■■□□ 2.99
SPOCK3-209ENST00000506697 MAGI1Q96QZ7 1491 aaPredicted RBP33.64■■■□□ 2.98
SPOCK3-209ENST00000506697 GAPVD1Q14C86 1478 aa33.6■■■□□ 2.97
SPOCK3-209ENST00000506697 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
SPOCK3-209ENST00000506697 SYNJ2O15056 1496 aa33.56■■■□□ 2.96
SPOCK3-209ENST00000506697 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
SPOCK3-209ENST00000506697 FGD5Q6ZNL6 1462 aa33.53■■■□□ 2.96
SPOCK3-209ENST00000506697 CUX1P39880 1505 aa33.32■■■□□ 2.92
SPOCK3-209ENST00000506697 ERCC6L2Q5T890 1561 aa33.23■■■□□ 2.91
SPOCK3-209ENST00000506697 PBRM1Q86U86 1689 aa33.22■■■□□ 2.91
SPOCK3-209ENST00000506697 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
SPOCK3-209ENST00000506697 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
SPOCK3-209ENST00000506697 ABCA10Q8WWZ4 1543 aa33.09■■■□□ 2.89
SPOCK3-209ENST00000506697 ILDR1Q86SU0 546 aaPredicted RBP33.08■■■□□ 2.89
SPOCK3-209ENST00000506697 ABCA5Q8WWZ7 1642 aa33.07■■■□□ 2.88
SPOCK3-209ENST00000506697 NUP160Q12769 1436 aa33.04■■■□□ 2.88
SPOCK3-209ENST00000506697 KIF13AQ9H1H9 1805 aa33■■■□□ 2.87
SPOCK3-209ENST00000506697 SHROOM2Q13796 1616 aa32.94■■■□□ 2.86
SPOCK3-209ENST00000506697 FAM69CQ0P6D2 419 aa32.92■■■□□ 2.86
SPOCK3-209ENST00000506697 ADAMTS12P58397 1594 aa32.91■■■□□ 2.86
SPOCK3-209ENST00000506697 KDM4FA0A1W2PPD8 638 aa32.88■■■□□ 2.85
SPOCK3-209ENST00000506697 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
SPOCK3-209ENST00000506697 ABCC10Q5T3U5 1492 aa32.84■■■□□ 2.85
SPOCK3-209ENST00000506697 PRG4Q92954 1404 aaPredicted RBP32.84■■■□□ 2.85
SPOCK3-209ENST00000506697 NPM1P06748 294 aaKnown RBP eCLIP32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms