RNA–Protein interactions for RNA: ENST00000506496.1

FBXO4-205, Transcript of F-box protein 4, humanhuman

TSL 3

Gene FBXO4, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-205ENST00000506496 NISCHQ9Y2I1 1504 aa41.83■■■■■ 4.29
FBXO4-205ENST00000506496 CCDC180Q9P1Z9 1646 aa37.44■■■■□ 3.58
FBXO4-205ENST00000506496 ABCC9O60706 1549 aa37.39■■■■□ 3.58
FBXO4-205ENST00000506496 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
FBXO4-205ENST00000506496 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
FBXO4-205ENST00000506496 NACADO15069 1562 aa35.38■■■■□ 3.25
FBXO4-205ENST00000506496 MYO15BQ96JP2 1530 aa34.87■■■■□ 3.17
FBXO4-205ENST00000506496 PABPN1Q86U42 306 aaKnown RBP eCLIP34.87■■■■□ 3.17
FBXO4-205ENST00000506496 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
FBXO4-205ENST00000506496 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
FBXO4-205ENST00000506496 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
FBXO4-205ENST00000506496 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
FBXO4-205ENST00000506496 BICRAQ9NZM4 1560 aa34.49■■■■□ 3.11
FBXO4-205ENST00000506496 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
FBXO4-205ENST00000506496 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
FBXO4-205ENST00000506496 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
FBXO4-205ENST00000506496 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
FBXO4-205ENST00000506496 CECR2Q9BXF3 1484 aa33.64■■■□□ 2.98
FBXO4-205ENST00000506496 NCAPD3P42695 1498 aa32.64■■■□□ 2.82
FBXO4-205ENST00000506496 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
FBXO4-205ENST00000506496 ATAD2BQ9ULI0 1458 aa32.59■■■□□ 2.81
FBXO4-205ENST00000506496 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
FBXO4-205ENST00000506496 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
FBXO4-205ENST00000506496 HMGXB3Q12766 1538 aa32.42■■■□□ 2.78
FBXO4-205ENST00000506496 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
FBXO4-205ENST00000506496 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
FBXO4-205ENST00000506496 MROH2BQ7Z745 1585 aa32.24■■■□□ 2.75
FBXO4-205ENST00000506496 PEG3Q9GZU2 1588 aa32.21■■■□□ 2.75
FBXO4-205ENST00000506496 NESP48681 1621 aa32.13■■■□□ 2.73
FBXO4-205ENST00000506496 CUX2O14529 1486 aa32.1■■■□□ 2.73
FBXO4-205ENST00000506496 LAMC3Q9Y6N6 1575 aa31.91■■■□□ 2.7
FBXO4-205ENST00000506496 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
FBXO4-205ENST00000506496 WIZO95785 1651 aa31.88■■■□□ 2.69
FBXO4-205ENST00000506496 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
FBXO4-205ENST00000506496 THOC2Q8NI27 1593 aaKnown RBP31.72■■■□□ 2.67
FBXO4-205ENST00000506496 KIF21AQ7Z4S6 1674 aa31.71■■■□□ 2.67
FBXO4-205ENST00000506496 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
FBXO4-205ENST00000506496 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
FBXO4-205ENST00000506496 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
FBXO4-205ENST00000506496 MRC2Q9UBG0 1479 aa31.47■■■□□ 2.63
FBXO4-205ENST00000506496 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
FBXO4-205ENST00000506496 FANCD2Q9BXW9 1451 aa31.37■■■□□ 2.61
FBXO4-205ENST00000506496 CFTRP13569 1480 aa31.34■■■□□ 2.61
FBXO4-205ENST00000506496 WDR62O43379 1518 aa31.34■■■□□ 2.61
FBXO4-205ENST00000506496 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.57
FBXO4-205ENST00000506496 URB2Q14146 1524 aaKnown RBP31.06■■■□□ 2.56
FBXO4-205ENST00000506496 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
FBXO4-205ENST00000506496 TOPBP1Q92547 1522 aa30.77■■■□□ 2.52
FBXO4-205ENST00000506496 OSCARQ8IYS5 282 aa30.75■■■□□ 2.51
FBXO4-205ENST00000506496 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
FBXO4-205ENST00000506496 TRIM41Q8WV44 630 aa30.74■■■□□ 2.51
FBXO4-205ENST00000506496 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
FBXO4-205ENST00000506496 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
FBXO4-205ENST00000506496 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
FBXO4-205ENST00000506496 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
FBXO4-205ENST00000506496 EIF4G3O43432 1585 aaKnown RBP30.5■■■□□ 2.47
FBXO4-205ENST00000506496 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
FBXO4-205ENST00000506496 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
FBXO4-205ENST00000506496 TARBP1Q13395 1621 aaKnown RBP30.43■■■□□ 2.46
FBXO4-205ENST00000506496 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
FBXO4-205ENST00000506496 SOGA1O94964 1423 aa30.38■■■□□ 2.45
FBXO4-205ENST00000506496 FBLN2P98095 1184 aa30.35■■■□□ 2.45
FBXO4-205ENST00000506496 FGD5Q6ZNL6 1462 aa30.32■■■□□ 2.44
FBXO4-205ENST00000506496 TDRD9Q8NDG6 1382 aaKnown RBP30.3■■■□□ 2.44
FBXO4-205ENST00000506496 CUX1P39880 1505 aa30.28■■■□□ 2.44
FBXO4-205ENST00000506496 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.44
FBXO4-205ENST00000506496 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.44
FBXO4-205ENST00000506496 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.44
FBXO4-205ENST00000506496 CHD1O14646 1710 aa30.26■■■□□ 2.43
FBXO4-205ENST00000506496 ARHGEF11O15085 1522 aa30.18■■■□□ 2.42
FBXO4-205ENST00000506496 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
FBXO4-205ENST00000506496 SNAPC4Q5SXM2 1469 aa30.14■■■□□ 2.42
FBXO4-205ENST00000506496 CHMP7Q8WUX9 453 aaPredicted RBP30.1■■■□□ 2.41
FBXO4-205ENST00000506496 GRIN2BQ13224 1484 aa30.08■■■□□ 2.41
FBXO4-205ENST00000506496 CYB5RLQ6IPT4 315 aa30.05■■■□□ 2.4
FBXO4-205ENST00000506496 MAGI1Q96QZ7 1491 aaPredicted RBP30.04■■■□□ 2.4
FBXO4-205ENST00000506496 GAPVD1Q14C86 1478 aa30■■■□□ 2.39
FBXO4-205ENST00000506496 PBRM1Q86U86 1689 aa29.95■■■□□ 2.39
FBXO4-205ENST00000506496 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.38
FBXO4-205ENST00000506496 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
FBXO4-205ENST00000506496 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
FBXO4-205ENST00000506496 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
FBXO4-205ENST00000506496 ARAP1Q96P48 1450 aa29.88■■■□□ 2.37
FBXO4-205ENST00000506496 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
FBXO4-205ENST00000506496 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
FBXO4-205ENST00000506496 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
FBXO4-205ENST00000506496 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
FBXO4-205ENST00000506496 TRHP20396 242 aaPredicted RBP29.75■■■□□ 2.35
FBXO4-205ENST00000506496 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
FBXO4-205ENST00000506496 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
FBXO4-205ENST00000506496 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
FBXO4-205ENST00000506496 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
FBXO4-205ENST00000506496 CEP170Q5SW79 1584 aa29.54■■■□□ 2.32
FBXO4-205ENST00000506496 NUP160Q12769 1436 aa29.53■■■□□ 2.32
FBXO4-205ENST00000506496 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
FBXO4-205ENST00000506496 SHROOM2Q13796 1616 aa29.35■■■□□ 2.29
FBXO4-205ENST00000506496 KIF27Q86VH2 1401 aa29.34■■■□□ 2.29
FBXO4-205ENST00000506496 PRG4Q92954 1404 aaPredicted RBP29.31■■■□□ 2.28
FBXO4-205ENST00000506496 JPH4Q96JJ6 628 aa29.31■■■□□ 2.28
FBXO4-205ENST00000506496 IGF1RP08069 1367 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms