RNA–Protein interactions for RNA: ENST00000506464.5

ABCC3-208, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 4

Gene ABCC3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-208ENST00000506464 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
ABCC3-208ENST00000506464 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
ABCC3-208ENST00000506464 ABCC9O60706 1549 aa26.74■■□□□ 1.87
ABCC3-208ENST00000506464 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
ABCC3-208ENST00000506464 NACADO15069 1562 aa25.6■■□□□ 1.69
ABCC3-208ENST00000506464 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
ABCC3-208ENST00000506464 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
ABCC3-208ENST00000506464 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
ABCC3-208ENST00000506464 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
ABCC3-208ENST00000506464 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
ABCC3-208ENST00000506464 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
ABCC3-208ENST00000506464 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
ABCC3-208ENST00000506464 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
ABCC3-208ENST00000506464 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
ABCC3-208ENST00000506464 SCRIBQ14160 1630 aa24.61■■□□□ 1.53
ABCC3-208ENST00000506464 EIF4G1Q04637 1599 aaKnown RBP24.26■■□□□ 1.47
ABCC3-208ENST00000506464 CC2D2AQ9P2K1 1620 aa24.23■■□□□ 1.47
ABCC3-208ENST00000506464 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
ABCC3-208ENST00000506464 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
ABCC3-208ENST00000506464 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
ABCC3-208ENST00000506464 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
ABCC3-208ENST00000506464 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
ABCC3-208ENST00000506464 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
ABCC3-208ENST00000506464 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
ABCC3-208ENST00000506464 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
ABCC3-208ENST00000506464 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
ABCC3-208ENST00000506464 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
ABCC3-208ENST00000506464 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
ABCC3-208ENST00000506464 CUX2O14529 1486 aa23.1■■□□□ 1.29
ABCC3-208ENST00000506464 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
ABCC3-208ENST00000506464 NESP48681 1621 aa23.01■■□□□ 1.27
ABCC3-208ENST00000506464 WIZO95785 1651 aa23■■□□□ 1.27
ABCC3-208ENST00000506464 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
ABCC3-208ENST00000506464 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
ABCC3-208ENST00000506464 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
ABCC3-208ENST00000506464 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
ABCC3-208ENST00000506464 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
ABCC3-208ENST00000506464 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
ABCC3-208ENST00000506464 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
ABCC3-208ENST00000506464 CFTRP13569 1480 aa22.66■■□□□ 1.22
ABCC3-208ENST00000506464 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
ABCC3-208ENST00000506464 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
ABCC3-208ENST00000506464 WDR62O43379 1518 aa22.61■■□□□ 1.21
ABCC3-208ENST00000506464 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
ABCC3-208ENST00000506464 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
ABCC3-208ENST00000506464 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
ABCC3-208ENST00000506464 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
ABCC3-208ENST00000506464 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
ABCC3-208ENST00000506464 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
ABCC3-208ENST00000506464 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
ABCC3-208ENST00000506464 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
ABCC3-208ENST00000506464 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
ABCC3-208ENST00000506464 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
ABCC3-208ENST00000506464 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
ABCC3-208ENST00000506464 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
ABCC3-208ENST00000506464 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
ABCC3-208ENST00000506464 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
ABCC3-208ENST00000506464 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
ABCC3-208ENST00000506464 SOGA1O94964 1423 aa21.88■■□□□ 1.09
ABCC3-208ENST00000506464 CUX1P39880 1505 aa21.85■■□□□ 1.09
ABCC3-208ENST00000506464 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
ABCC3-208ENST00000506464 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.09
ABCC3-208ENST00000506464 RAD54L2Q9Y4B4 1467 aa21.81■■□□□ 1.08
ABCC3-208ENST00000506464 CHD1O14646 1710 aa21.75■■□□□ 1.07
ABCC3-208ENST00000506464 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
ABCC3-208ENST00000506464 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
ABCC3-208ENST00000506464 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
ABCC3-208ENST00000506464 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
ABCC3-208ENST00000506464 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
ABCC3-208ENST00000506464 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
ABCC3-208ENST00000506464 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
ABCC3-208ENST00000506464 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
ABCC3-208ENST00000506464 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
ABCC3-208ENST00000506464 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
ABCC3-208ENST00000506464 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
ABCC3-208ENST00000506464 FBLN2P98095 1184 aa21.64■■□□□ 1.05
ABCC3-208ENST00000506464 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
ABCC3-208ENST00000506464 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
ABCC3-208ENST00000506464 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
ABCC3-208ENST00000506464 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
ABCC3-208ENST00000506464 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
ABCC3-208ENST00000506464 SYNJ2O15056 1496 aa21.6■■□□□ 1.05
ABCC3-208ENST00000506464 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
ABCC3-208ENST00000506464 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
ABCC3-208ENST00000506464 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
ABCC3-208ENST00000506464 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
ABCC3-208ENST00000506464 ADAMTS12P58397 1594 aa21.43■■□□□ 1.02
ABCC3-208ENST00000506464 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
ABCC3-208ENST00000506464 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
ABCC3-208ENST00000506464 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
ABCC3-208ENST00000506464 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
ABCC3-208ENST00000506464 NUP160Q12769 1436 aa21.33■■□□□ 1.01
ABCC3-208ENST00000506464 CEP170Q5SW79 1584 aa21.27■■□□□ 1
ABCC3-208ENST00000506464 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
ABCC3-208ENST00000506464 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
ABCC3-208ENST00000506464 CUL7Q14999 1698 aa21.19■□□□□ 0.98
ABCC3-208ENST00000506464 IGF1RP08069 1367 aa21.12■□□□□ 0.97
ABCC3-208ENST00000506464 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
ABCC3-208ENST00000506464 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
ABCC3-208ENST00000506464 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms