RNA–Protein interactions for RNA: ENST00000506445.5

GRAMD2B-207, Transcript of GRAM domain containing 2B, humanhuman

TSL 5

Gene GRAMD2B, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-207ENST00000506445 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
GRAMD2B-207ENST00000506445 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
GRAMD2B-207ENST00000506445 ABCC9O60706 1549 aa23.64■■□□□ 1.38
GRAMD2B-207ENST00000506445 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
GRAMD2B-207ENST00000506445 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
GRAMD2B-207ENST00000506445 NACADO15069 1562 aa22.8■■□□□ 1.24
GRAMD2B-207ENST00000506445 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
GRAMD2B-207ENST00000506445 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
GRAMD2B-207ENST00000506445 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
GRAMD2B-207ENST00000506445 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
GRAMD2B-207ENST00000506445 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
GRAMD2B-207ENST00000506445 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.13
GRAMD2B-207ENST00000506445 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
GRAMD2B-207ENST00000506445 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
GRAMD2B-207ENST00000506445 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
GRAMD2B-207ENST00000506445 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
GRAMD2B-207ENST00000506445 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
GRAMD2B-207ENST00000506445 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
GRAMD2B-207ENST00000506445 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
GRAMD2B-207ENST00000506445 CECR2Q9BXF3 1484 aa21.25■□□□□ 0.99
GRAMD2B-207ENST00000506445 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
GRAMD2B-207ENST00000506445 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
GRAMD2B-207ENST00000506445 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
GRAMD2B-207ENST00000506445 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
GRAMD2B-207ENST00000506445 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
GRAMD2B-207ENST00000506445 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.95
GRAMD2B-207ENST00000506445 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
GRAMD2B-207ENST00000506445 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
GRAMD2B-207ENST00000506445 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
GRAMD2B-207ENST00000506445 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
GRAMD2B-207ENST00000506445 WIZO95785 1651 aa20.8■□□□□ 0.92
GRAMD2B-207ENST00000506445 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
GRAMD2B-207ENST00000506445 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
GRAMD2B-207ENST00000506445 NESP48681 1621 aa20.45■□□□□ 0.87
GRAMD2B-207ENST00000506445 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
GRAMD2B-207ENST00000506445 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
GRAMD2B-207ENST00000506445 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
GRAMD2B-207ENST00000506445 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
GRAMD2B-207ENST00000506445 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
GRAMD2B-207ENST00000506445 CFTRP13569 1480 aa20.31■□□□□ 0.84
GRAMD2B-207ENST00000506445 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
GRAMD2B-207ENST00000506445 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
GRAMD2B-207ENST00000506445 CUX2O14529 1486 aa20.16■□□□□ 0.82
GRAMD2B-207ENST00000506445 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
GRAMD2B-207ENST00000506445 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
GRAMD2B-207ENST00000506445 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
GRAMD2B-207ENST00000506445 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
GRAMD2B-207ENST00000506445 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
GRAMD2B-207ENST00000506445 WDR62O43379 1518 aa20.01■□□□□ 0.79
GRAMD2B-207ENST00000506445 URB2Q14146 1524 aaKnown RBP19.95■□□□□ 0.78
GRAMD2B-207ENST00000506445 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
GRAMD2B-207ENST00000506445 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
GRAMD2B-207ENST00000506445 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
GRAMD2B-207ENST00000506445 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
GRAMD2B-207ENST00000506445 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
GRAMD2B-207ENST00000506445 CUX1P39880 1505 aa19.71■□□□□ 0.75
GRAMD2B-207ENST00000506445 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
GRAMD2B-207ENST00000506445 SOGA1O94964 1423 aa19.67■□□□□ 0.74
GRAMD2B-207ENST00000506445 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
GRAMD2B-207ENST00000506445 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
GRAMD2B-207ENST00000506445 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
GRAMD2B-207ENST00000506445 ZNF608Q9ULD9 1512 aaPredicted RBP19.6■□□□□ 0.73
GRAMD2B-207ENST00000506445 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
GRAMD2B-207ENST00000506445 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
GRAMD2B-207ENST00000506445 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
GRAMD2B-207ENST00000506445 SYNJ1O43426 1573 aa19.54■□□□□ 0.72
GRAMD2B-207ENST00000506445 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
GRAMD2B-207ENST00000506445 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.72
GRAMD2B-207ENST00000506445 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
GRAMD2B-207ENST00000506445 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
GRAMD2B-207ENST00000506445 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
GRAMD2B-207ENST00000506445 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
GRAMD2B-207ENST00000506445 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
GRAMD2B-207ENST00000506445 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
GRAMD2B-207ENST00000506445 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
GRAMD2B-207ENST00000506445 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
GRAMD2B-207ENST00000506445 FBLN2P98095 1184 aa19.35■□□□□ 0.69
GRAMD2B-207ENST00000506445 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
GRAMD2B-207ENST00000506445 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
GRAMD2B-207ENST00000506445 PBRM1Q86U86 1689 aa19.32■□□□□ 0.68
GRAMD2B-207ENST00000506445 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
GRAMD2B-207ENST00000506445 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
GRAMD2B-207ENST00000506445 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
GRAMD2B-207ENST00000506445 CHD1O14646 1710 aa19.26■□□□□ 0.67
GRAMD2B-207ENST00000506445 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
GRAMD2B-207ENST00000506445 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
GRAMD2B-207ENST00000506445 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
GRAMD2B-207ENST00000506445 IGF1RP08069 1367 aa19.18■□□□□ 0.66
GRAMD2B-207ENST00000506445 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
GRAMD2B-207ENST00000506445 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
GRAMD2B-207ENST00000506445 CUL7Q14999 1698 aa19.08■□□□□ 0.65
GRAMD2B-207ENST00000506445 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
GRAMD2B-207ENST00000506445 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
GRAMD2B-207ENST00000506445 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
GRAMD2B-207ENST00000506445 NUP160Q12769 1436 aa19.04■□□□□ 0.64
GRAMD2B-207ENST00000506445 CEP170Q5SW79 1584 aa19■□□□□ 0.63
GRAMD2B-207ENST00000506445 ARHGEF11O15085 1522 aa19■□□□□ 0.63
GRAMD2B-207ENST00000506445 RIMBP3CA6NJZ7 1639 aa18.98■□□□□ 0.63
GRAMD2B-207ENST00000506445 RIMBP3BA6NNM3 1639 aa18.98■□□□□ 0.63
GRAMD2B-207ENST00000506445 RIMBP3Q9UFD9 1639 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms