RNA–Protein interactions for RNA: ENST00000506358.1

RNF175-203, Transcript of ring finger protein 175, humanhuman

TSL 3

Gene RNF175, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF175-203ENST00000506358 NISCHQ9Y2I1 1504 aa54.49■■■■■ 6.31
RNF175-203ENST00000506358 CCDC180Q9P1Z9 1646 aa48.67■■■■■ 5.38
RNF175-203ENST00000506358 ABCC9O60706 1549 aa47.81■■■■■ 5.24
RNF175-203ENST00000506358 RB1CC1Q8TDY2 1594 aa45.92■■■■■ 4.94
RNF175-203ENST00000506358 NACADO15069 1562 aa45.79■■■■■ 4.92
RNF175-203ENST00000506358 DCAF8L2P0C7V8 631 aa45.51■■■■■ 4.88
RNF175-203ENST00000506358 MYO15BQ96JP2 1530 aa45.43■■■■■ 4.86
RNF175-203ENST00000506358 ZCCHC6Q5VYS8 1495 aaKnown RBP45.35■■■■■ 4.85
RNF175-203ENST00000506358 DCAF1Q9Y4B6 1507 aa45.11■■■■■ 4.81
RNF175-203ENST00000506358 UNC13AQ9UPW8 1703 aa44.92■■■■■ 4.78
RNF175-203ENST00000506358 PABPN1Q86U42 306 aaKnown RBP eCLIP44.56■■■■■ 4.72
RNF175-203ENST00000506358 BICRAQ9NZM4 1560 aa44.53■■■■■ 4.72
RNF175-203ENST00000506358 SCRIBQ14160 1630 aa44.31■■■■■ 4.68
RNF175-203ENST00000506358 DNAJC5BQ9UF47 199 aa44.12■■■■■ 4.65
RNF175-203ENST00000506358 SHROOM4Q9ULL8 1493 aa44.09■■■■■ 4.65
RNF175-203ENST00000506358 EIF4G1Q04637 1599 aaKnown RBP43.39■■■■■ 4.54
RNF175-203ENST00000506358 CC2D2AQ9P2K1 1620 aa43.29■■■■■ 4.52
RNF175-203ENST00000506358 CECR2Q9BXF3 1484 aa43.02■■■■■ 4.48
RNF175-203ENST00000506358 SMARCA4P51532 1647 aa42.38■■■■■ 4.37
RNF175-203ENST00000506358 BAZ1AQ9NRL2 1556 aaPredicted RBP42.27■■■■■ 4.36
RNF175-203ENST00000506358 NCAPD3P42695 1498 aa42.23■■■■■ 4.35
RNF175-203ENST00000506358 ATAD2BQ9ULI0 1458 aa42.19■■■■■ 4.34
RNF175-203ENST00000506358 SMARCA2P51531 1590 aa42.16■■■■■ 4.34
RNF175-203ENST00000506358 HMGXB3Q12766 1538 aa42.04■■■■■ 4.32
RNF175-203ENST00000506358 PEG3Q9GZU2 1588 aa41.99■■■■■ 4.31
RNF175-203ENST00000506358 MROH2BQ7Z745 1585 aa41.97■■■■■ 4.31
RNF175-203ENST00000506358 BAZ1BQ9UIG0 1483 aaKnown RBP41.84■■■■■ 4.29
RNF175-203ENST00000506358 WIZO95785 1651 aa41.52■■■■■ 4.24
RNF175-203ENST00000506358 RSF1Q96T23 1441 aaPredicted RBP41.35■■■■■ 4.21
RNF175-203ENST00000506358 NESP48681 1621 aa41.29■■■■■ 4.2
RNF175-203ENST00000506358 ERCC6Q03468 1493 aa41.26■■■■■ 4.2
RNF175-203ENST00000506358 LAMC3Q9Y6N6 1575 aa41.2■■■■■ 4.19
RNF175-203ENST00000506358 TOP2AP11388 1531 aaKnown RBP41.08■■■■■ 4.17
RNF175-203ENST00000506358 CUX2O14529 1486 aa40.98■■■■■ 4.15
RNF175-203ENST00000506358 CADPSQ9ULU8 1353 aa40.95■■■■■ 4.15
RNF175-203ENST00000506358 PDS5BQ9NTI5 1447 aa40.89■■■■■ 4.14
RNF175-203ENST00000506358 KIF21AQ7Z4S6 1674 aa40.86■■■■■ 4.13
RNF175-203ENST00000506358 THOC2Q8NI27 1593 aaKnown RBP40.81■■■■■ 4.12
RNF175-203ENST00000506358 CFTRP13569 1480 aa40.67■■■■■ 4.1
RNF175-203ENST00000506358 CCDC88BA6NC98 1476 aa40.55■■■■■ 4.08
RNF175-203ENST00000506358 MRC2Q9UBG0 1479 aa40.51■■■■■ 4.07
RNF175-203ENST00000506358 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
RNF175-203ENST00000506358 CEP164Q9UPV0 1460 aa40.5■■■■■ 4.07
RNF175-203ENST00000506358 PRDM2Q13029 1718 aa40.44■■■■■ 4.06
RNF175-203ENST00000506358 WDR62O43379 1518 aa40.42■■■■■ 4.06
RNF175-203ENST00000506358 URB2Q14146 1524 aaKnown RBP40.11■■■■■ 4.01
RNF175-203ENST00000506358 DNAJC5Q9H3Z4 198 aa40.01■■■■■ 4
RNF175-203ENST00000506358 SUPT5HO00267 1087 aaKnown RBP39.97■■■■□ 3.99
RNF175-203ENST00000506358 TOPBP1Q92547 1522 aa39.82■■■■□ 3.97
RNF175-203ENST00000506358 ABCC8Q09428 1581 aa39.81■■■■□ 3.96
RNF175-203ENST00000506358 DNMBPQ6XZF7 1577 aa39.78■■■■□ 3.96
RNF175-203ENST00000506358 IFT140Q96RY7 1462 aa39.66■■■■□ 3.94
RNF175-203ENST00000506358 ZNF608Q9ULD9 1512 aaPredicted RBP39.48■■■■□ 3.91
RNF175-203ENST00000506358 POLA1P09884 1462 aaPredicted RBP39.47■■■■□ 3.91
RNF175-203ENST00000506358 TARBP1Q13395 1621 aaKnown RBP39.44■■■■□ 3.9
RNF175-203ENST00000506358 CUX1P39880 1505 aa39.4■■■■□ 3.9
RNF175-203ENST00000506358 EIF4G3O43432 1585 aaKnown RBP39.38■■■■□ 3.89
RNF175-203ENST00000506358 FGD5Q6ZNL6 1462 aa39.32■■■■□ 3.89
RNF175-203ENST00000506358 RAD54L2Q9Y4B4 1467 aa39.26■■■■□ 3.88
RNF175-203ENST00000506358 SOGA1O94964 1423 aa39.26■■■■□ 3.88
RNF175-203ENST00000506358 AQRO60306 1485 aaKnown RBP eCLIP39.19■■■■□ 3.86
RNF175-203ENST00000506358 WDR97A6NE52 1622 aa39.16■■■■□ 3.86
RNF175-203ENST00000506358 OSCARQ8IYS5 282 aa39.13■■■■□ 3.85
RNF175-203ENST00000506358 TDRD9Q8NDG6 1382 aaKnown RBP39.06■■■■□ 3.84
RNF175-203ENST00000506358 BIVM-ERCC5R4GMW8 1640 aa39.03■■■■□ 3.84
RNF175-203ENST00000506358 TOP2BQ02880 1626 aa39.01■■■■□ 3.84
RNF175-203ENST00000506358 WRNQ14191 1432 aaPredicted RBP eCLIP39.01■■■■□ 3.84
RNF175-203ENST00000506358 SYNJ1O43426 1573 aa38.96■■■■□ 3.83
RNF175-203ENST00000506358 CHD1O14646 1710 aa38.94■■■■□ 3.82
RNF175-203ENST00000506358 ABCA10Q8WWZ4 1543 aa38.94■■■■□ 3.82
RNF175-203ENST00000506358 GRIN2BQ13224 1484 aa38.87■■■■□ 3.81
RNF175-203ENST00000506358 SNAPC4Q5SXM2 1469 aa38.86■■■■□ 3.81
RNF175-203ENST00000506358 ABCA5Q8WWZ7 1642 aa38.85■■■■□ 3.81
RNF175-203ENST00000506358 PBRM1Q86U86 1689 aa38.84■■■■□ 3.81
RNF175-203ENST00000506358 MAGI1Q96QZ7 1491 aaPredicted RBP38.83■■■■□ 3.81
RNF175-203ENST00000506358 GAPVD1Q14C86 1478 aa38.82■■■■□ 3.81
RNF175-203ENST00000506358 FBLN2P98095 1184 aa38.74■■■■□ 3.79
RNF175-203ENST00000506358 SYNJ2O15056 1496 aa38.67■■■■□ 3.78
RNF175-203ENST00000506358 RIMBP3CA6NJZ7 1639 aa38.63■■■■□ 3.77
RNF175-203ENST00000506358 RIMBP3BA6NNM3 1639 aa38.63■■■■□ 3.77
RNF175-203ENST00000506358 RIMBP3Q9UFD9 1639 aa38.63■■■■□ 3.77
RNF175-203ENST00000506358 CHMP7Q8WUX9 453 aaPredicted RBP38.61■■■■□ 3.77
RNF175-203ENST00000506358 ARHGEF11O15085 1522 aa38.58■■■■□ 3.77
RNF175-203ENST00000506358 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
RNF175-203ENST00000506358 CLASP1Q7Z460 1538 aa38.51■■■■□ 3.76
RNF175-203ENST00000506358 ADAMTS12P58397 1594 aa38.49■■■■□ 3.75
RNF175-203ENST00000506358 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
RNF175-203ENST00000506358 GRIN2AQ12879 1464 aa38.39■■■■□ 3.74
RNF175-203ENST00000506358 FHAD1B1AJZ9 1412 aa38.37■■■■□ 3.73
RNF175-203ENST00000506358 ARAP1Q96P48 1450 aa38.23■■■■□ 3.71
RNF175-203ENST00000506358 NUP160Q12769 1436 aa38.23■■■■□ 3.71
RNF175-203ENST00000506358 KIF27Q86VH2 1401 aa38.22■■■■□ 3.71
RNF175-203ENST00000506358 CEP170Q5SW79 1584 aa38.22■■■■□ 3.71
RNF175-203ENST00000506358 CYB5RLQ6IPT4 315 aa38.14■■■■□ 3.7
RNF175-203ENST00000506358 CUL7Q14999 1698 aa38.1■■■■□ 3.69
RNF175-203ENST00000506358 IGF1RP08069 1367 aa38.07■■■■□ 3.69
RNF175-203ENST00000506358 SHROOM2Q13796 1616 aa38.01■■■■□ 3.68
RNF175-203ENST00000506358 RUSC2Q8N2Y8 1516 aa37.94■■■■□ 3.66
RNF175-203ENST00000506358 ERCC6L2Q5T890 1561 aa37.91■■■■□ 3.66
RNF175-203ENST00000506358 CARMIL1Q5VZK9 1371 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms