RNA–Protein interactions for RNA: ENST00000506320.1

SIKE1-209, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-209ENST00000506320 NISCHQ9Y2I1 1504 aa49.7■■■■■ 5.55
SIKE1-209ENST00000506320 CCDC180Q9P1Z9 1646 aa44.58■■■■■ 4.73
SIKE1-209ENST00000506320 ABCC9O60706 1549 aa43.9■■■■■ 4.62
SIKE1-209ENST00000506320 RB1CC1Q8TDY2 1594 aa42.14■■■■■ 4.34
SIKE1-209ENST00000506320 NACADO15069 1562 aa41.97■■■■■ 4.31
SIKE1-209ENST00000506320 MYO15BQ96JP2 1530 aa41.59■■■■■ 4.25
SIKE1-209ENST00000506320 DCAF8L2P0C7V8 631 aa41.52■■■■■ 4.24
SIKE1-209ENST00000506320 ZCCHC6Q5VYS8 1495 aaKnown RBP41.31■■■■■ 4.2
SIKE1-209ENST00000506320 UNC13AQ9UPW8 1703 aa41.21■■■■■ 4.19
SIKE1-209ENST00000506320 DCAF1Q9Y4B6 1507 aa41.18■■■■■ 4.18
SIKE1-209ENST00000506320 BICRAQ9NZM4 1560 aa40.82■■■■■ 4.13
SIKE1-209ENST00000506320 PABPN1Q86U42 306 aaKnown RBP eCLIP40.82■■■■■ 4.13
SIKE1-209ENST00000506320 DNAJC5BQ9UF47 199 aa40.65■■■■■ 4.1
SIKE1-209ENST00000506320 SHROOM4Q9ULL8 1493 aa40.51■■■■■ 4.07
SIKE1-209ENST00000506320 SCRIBQ14160 1630 aa40.47■■■■■ 4.07
SIKE1-209ENST00000506320 EIF4G1Q04637 1599 aaKnown RBP39.81■■■■□ 3.96
SIKE1-209ENST00000506320 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.96
SIKE1-209ENST00000506320 CECR2Q9BXF3 1484 aa39.55■■■■□ 3.92
SIKE1-209ENST00000506320 SMARCA4P51532 1647 aa38.72■■■■□ 3.79
SIKE1-209ENST00000506320 NCAPD3P42695 1498 aa38.66■■■■□ 3.78
SIKE1-209ENST00000506320 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
SIKE1-209ENST00000506320 SMARCA2P51531 1590 aa38.6■■■■□ 3.77
SIKE1-209ENST00000506320 ATAD2BQ9ULI0 1458 aa38.58■■■■□ 3.77
SIKE1-209ENST00000506320 HMGXB3Q12766 1538 aa38.51■■■■□ 3.76
SIKE1-209ENST00000506320 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
SIKE1-209ENST00000506320 BAZ1BQ9UIG0 1483 aaKnown RBP38.26■■■■□ 3.72
SIKE1-209ENST00000506320 MROH2BQ7Z745 1585 aa38.24■■■■□ 3.71
SIKE1-209ENST00000506320 ERCC6Q03468 1493 aa37.94■■■■□ 3.66
SIKE1-209ENST00000506320 WIZO95785 1651 aa37.83■■■■□ 3.65
SIKE1-209ENST00000506320 NESP48681 1621 aa37.82■■■■□ 3.64
SIKE1-209ENST00000506320 CUX2O14529 1486 aa37.81■■■■□ 3.64
SIKE1-209ENST00000506320 LAMC3Q9Y6N6 1575 aa37.8■■■■□ 3.64
SIKE1-209ENST00000506320 RSF1Q96T23 1441 aaPredicted RBP37.6■■■■□ 3.61
SIKE1-209ENST00000506320 PDS5BQ9NTI5 1447 aa37.5■■■■□ 3.59
SIKE1-209ENST00000506320 THOC2Q8NI27 1593 aaKnown RBP37.5■■■■□ 3.59
SIKE1-209ENST00000506320 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
SIKE1-209ENST00000506320 CADPSQ9ULU8 1353 aa37.46■■■■□ 3.59
SIKE1-209ENST00000506320 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
SIKE1-209ENST00000506320 CFTRP13569 1480 aa37.17■■■■□ 3.54
SIKE1-209ENST00000506320 MRC2Q9UBG0 1479 aa37.16■■■■□ 3.54
SIKE1-209ENST00000506320 DNAJC5Q9H3Z4 198 aa37.13■■■■□ 3.53
SIKE1-209ENST00000506320 CEP164Q9UPV0 1460 aa37.1■■■■□ 3.53
SIKE1-209ENST00000506320 WDR62O43379 1518 aa37.09■■■■□ 3.53
SIKE1-209ENST00000506320 FANCD2Q9BXW9 1451 aa37.07■■■■□ 3.52
SIKE1-209ENST00000506320 PRDM2Q13029 1718 aa37.03■■■■□ 3.52
SIKE1-209ENST00000506320 CCDC88BA6NC98 1476 aa36.92■■■■□ 3.5
SIKE1-209ENST00000506320 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
SIKE1-209ENST00000506320 ABCC8Q09428 1581 aa36.46■■■■□ 3.43
SIKE1-209ENST00000506320 TOPBP1Q92547 1522 aa36.42■■■■□ 3.42
SIKE1-209ENST00000506320 DNMBPQ6XZF7 1577 aa36.38■■■■□ 3.41
SIKE1-209ENST00000506320 IFT140Q96RY7 1462 aa36.35■■■■□ 3.41
SIKE1-209ENST00000506320 ZNF608Q9ULD9 1512 aaPredicted RBP36.14■■■■□ 3.38
SIKE1-209ENST00000506320 SUPT5HO00267 1087 aaKnown RBP36.11■■■■□ 3.37
SIKE1-209ENST00000506320 TARBP1Q13395 1621 aaKnown RBP36.11■■■■□ 3.37
SIKE1-209ENST00000506320 EIF4G3O43432 1585 aaKnown RBP36.1■■■■□ 3.37
SIKE1-209ENST00000506320 POLA1P09884 1462 aaPredicted RBP36.07■■■■□ 3.37
SIKE1-209ENST00000506320 OSCARQ8IYS5 282 aa36.01■■■■□ 3.36
SIKE1-209ENST00000506320 CUX1P39880 1505 aa35.92■■■■□ 3.34
SIKE1-209ENST00000506320 WDR97A6NE52 1622 aa35.9■■■■□ 3.34
SIKE1-209ENST00000506320 FGD5Q6ZNL6 1462 aa35.9■■■■□ 3.34
SIKE1-209ENST00000506320 SOGA1O94964 1423 aa35.87■■■■□ 3.33
SIKE1-209ENST00000506320 AQRO60306 1485 aaKnown RBP eCLIP35.86■■■■□ 3.332e-6■■■□□ 16.3
SIKE1-209ENST00000506320 RAD54L2Q9Y4B4 1467 aa35.84■■■■□ 3.33
SIKE1-209ENST00000506320 CHD1O14646 1710 aa35.76■■■■□ 3.31
SIKE1-209ENST00000506320 TDRD9Q8NDG6 1382 aaKnown RBP35.68■■■■□ 3.3
SIKE1-209ENST00000506320 TRIM41Q8WV44 630 aa35.6■■■■□ 3.29
SIKE1-209ENST00000506320 RIMBP3CA6NJZ7 1639 aa35.58■■■■□ 3.29
SIKE1-209ENST00000506320 RIMBP3BA6NNM3 1639 aa35.58■■■■□ 3.29
SIKE1-209ENST00000506320 RIMBP3Q9UFD9 1639 aa35.58■■■■□ 3.29
SIKE1-209ENST00000506320 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
SIKE1-209ENST00000506320 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
SIKE1-209ENST00000506320 MAGI1Q96QZ7 1491 aaPredicted RBP35.58■■■■□ 3.29
SIKE1-209ENST00000506320 SNAPC4Q5SXM2 1469 aa35.56■■■■□ 3.28
SIKE1-209ENST00000506320 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
SIKE1-209ENST00000506320 PBRM1Q86U86 1689 aa35.55■■■■□ 3.28
SIKE1-209ENST00000506320 TOP2BQ02880 1626 aa35.54■■■■□ 3.28
SIKE1-209ENST00000506320 ARHGEF11O15085 1522 aa35.51■■■■□ 3.27
SIKE1-209ENST00000506320 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
SIKE1-209ENST00000506320 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
SIKE1-209ENST00000506320 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
SIKE1-209ENST00000506320 FBLN2P98095 1184 aa35.48■■■■□ 3.27
SIKE1-209ENST00000506320 SYNJ1O43426 1573 aa35.45■■■■□ 3.27
SIKE1-209ENST00000506320 SYNJ2O15056 1496 aa35.42■■■■□ 3.26
SIKE1-209ENST00000506320 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
SIKE1-209ENST00000506320 CLASP1Q7Z460 1538 aa35.33■■■■□ 3.25
SIKE1-209ENST00000506320 ADAMTS12P58397 1594 aa35.19■■■■□ 3.22
SIKE1-209ENST00000506320 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
SIKE1-209ENST00000506320 ARAP1Q96P48 1450 aa35.15■■■■□ 3.22
SIKE1-209ENST00000506320 GRIN2AQ12879 1464 aa35.12■■■■□ 3.21
SIKE1-209ENST00000506320 CYB5RLQ6IPT4 315 aa35.07■■■■□ 3.2
SIKE1-209ENST00000506320 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
SIKE1-209ENST00000506320 NUP160Q12769 1436 aa34.98■■■■□ 3.19
SIKE1-209ENST00000506320 CEP170Q5SW79 1584 aa34.96■■■■□ 3.19
SIKE1-209ENST00000506320 SHROOM2Q13796 1616 aa34.84■■■■□ 3.17
SIKE1-209ENST00000506320 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
SIKE1-209ENST00000506320 CUL7Q14999 1698 aa34.79■■■■□ 3.16
SIKE1-209ENST00000506320 ERCC6L2Q5T890 1561 aa34.7■■■■□ 3.15
SIKE1-209ENST00000506320 RUSC2Q8N2Y8 1516 aa34.7■■■■□ 3.14
SIKE1-209ENST00000506320 IGF1RP08069 1367 aa34.66■■■■□ 3.14
SIKE1-209ENST00000506320 TRHP20396 242 aaPredicted RBP34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms