RNA–Protein interactions for RNA: ENST00000506215.1

CDK18-215, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-215ENST00000506215 NISCHQ9Y2I1 1504 aa43.07■■■■■ 4.48
CDK18-215ENST00000506215 ABCC9O60706 1549 aa39■■■■□ 3.83
CDK18-215ENST00000506215 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
CDK18-215ENST00000506215 RB1CC1Q8TDY2 1594 aa37.05■■■■□ 3.52
CDK18-215ENST00000506215 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
CDK18-215ENST00000506215 NACADO15069 1562 aa36.74■■■■□ 3.47
CDK18-215ENST00000506215 UNC13AQ9UPW8 1703 aa36.28■■■■□ 3.4
CDK18-215ENST00000506215 DCAF8L2P0C7V8 631 aa36.23■■■■□ 3.39
CDK18-215ENST00000506215 PABPN1Q86U42 306 aaKnown RBP eCLIP36.18■■■■□ 3.38
CDK18-215ENST00000506215 MYO15BQ96JP2 1530 aa36.18■■■■□ 3.38
CDK18-215ENST00000506215 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
CDK18-215ENST00000506215 ZCCHC6Q5VYS8 1495 aaKnown RBP35.68■■■■□ 3.3
CDK18-215ENST00000506215 DCAF1Q9Y4B6 1507 aa35.6■■■■□ 3.29
CDK18-215ENST00000506215 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
CDK18-215ENST00000506215 SCRIBQ14160 1630 aa35.32■■■■□ 3.24
CDK18-215ENST00000506215 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
CDK18-215ENST00000506215 CECR2Q9BXF3 1484 aa35.17■■■■□ 3.22
CDK18-215ENST00000506215 EIF4G1Q04637 1599 aaKnown RBP35.13■■■■□ 3.21
CDK18-215ENST00000506215 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
CDK18-215ENST00000506215 NCAPD3P42695 1498 aa33.89■■■■□ 3.02
CDK18-215ENST00000506215 CUX2O14529 1486 aa33.78■■■■□ 3
CDK18-215ENST00000506215 ATAD2BQ9ULI0 1458 aa33.76■■■□□ 2.99
CDK18-215ENST00000506215 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
CDK18-215ENST00000506215 ERCC6Q03468 1493 aa33.68■■■□□ 2.98
CDK18-215ENST00000506215 HMGXB3Q12766 1538 aa33.68■■■□□ 2.98
CDK18-215ENST00000506215 SMARCA2P51531 1590 aa33.66■■■□□ 2.98
CDK18-215ENST00000506215 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
CDK18-215ENST00000506215 NESP48681 1621 aa33.44■■■□□ 2.94
CDK18-215ENST00000506215 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
CDK18-215ENST00000506215 PEG3Q9GZU2 1588 aa33.39■■■□□ 2.94
CDK18-215ENST00000506215 THOC2Q8NI27 1593 aaKnown RBP33.26■■■□□ 2.91
CDK18-215ENST00000506215 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
CDK18-215ENST00000506215 MROH2BQ7Z745 1585 aa33.18■■■□□ 2.9
CDK18-215ENST00000506215 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.88
CDK18-215ENST00000506215 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
CDK18-215ENST00000506215 CADPSQ9ULU8 1353 aa32.81■■■□□ 2.84
CDK18-215ENST00000506215 WIZO95785 1651 aa32.77■■■□□ 2.84
CDK18-215ENST00000506215 MRC2Q9UBG0 1479 aa32.74■■■□□ 2.83
CDK18-215ENST00000506215 WDR62O43379 1518 aa32.71■■■□□ 2.83
CDK18-215ENST00000506215 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
CDK18-215ENST00000506215 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
CDK18-215ENST00000506215 CFTRP13569 1480 aa32.42■■■□□ 2.78
CDK18-215ENST00000506215 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
CDK18-215ENST00000506215 RSF1Q96T23 1441 aaPredicted RBP32.36■■■□□ 2.77
CDK18-215ENST00000506215 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
CDK18-215ENST00000506215 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
CDK18-215ENST00000506215 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
CDK18-215ENST00000506215 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
CDK18-215ENST00000506215 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
CDK18-215ENST00000506215 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
CDK18-215ENST00000506215 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
CDK18-215ENST00000506215 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
CDK18-215ENST00000506215 RIMBP3CA6NJZ7 1639 aa31.81■■■□□ 2.68
CDK18-215ENST00000506215 RIMBP3BA6NNM3 1639 aa31.81■■■□□ 2.68
CDK18-215ENST00000506215 RIMBP3Q9UFD9 1639 aa31.81■■■□□ 2.68
CDK18-215ENST00000506215 EIF4G3O43432 1585 aaKnown RBP31.75■■■□□ 2.67
CDK18-215ENST00000506215 ABCC8Q09428 1581 aa31.72■■■□□ 2.67
CDK18-215ENST00000506215 DNMBPQ6XZF7 1577 aa31.72■■■□□ 2.67
CDK18-215ENST00000506215 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
CDK18-215ENST00000506215 TARBP1Q13395 1621 aaKnown RBP31.62■■■□□ 2.65
CDK18-215ENST00000506215 CHD1O14646 1710 aa31.55■■■□□ 2.64
CDK18-215ENST00000506215 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
CDK18-215ENST00000506215 AQRO60306 1485 aaKnown RBP eCLIP31.5■■■□□ 2.63
CDK18-215ENST00000506215 ARAP1Q96P48 1450 aa31.35■■■□□ 2.61
CDK18-215ENST00000506215 RAD54L2Q9Y4B4 1467 aa31.35■■■□□ 2.61
CDK18-215ENST00000506215 CYB5RLQ6IPT4 315 aa31.31■■■□□ 2.6
CDK18-215ENST00000506215 WDR97A6NE52 1622 aa31.3■■■□□ 2.6
CDK18-215ENST00000506215 SOGA1O94964 1423 aa31.27■■■□□ 2.6
CDK18-215ENST00000506215 FGD5Q6ZNL6 1462 aa31.26■■■□□ 2.59
CDK18-215ENST00000506215 FBLN2P98095 1184 aa31.25■■■□□ 2.59
CDK18-215ENST00000506215 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
CDK18-215ENST00000506215 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
CDK18-215ENST00000506215 CUX1P39880 1505 aa31.2■■■□□ 2.59
CDK18-215ENST00000506215 CLASP1Q7Z460 1538 aa31.2■■■□□ 2.59
CDK18-215ENST00000506215 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.58
CDK18-215ENST00000506215 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
CDK18-215ENST00000506215 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
CDK18-215ENST00000506215 SYNJ2O15056 1496 aa31.03■■■□□ 2.56
CDK18-215ENST00000506215 TRHP20396 242 aaPredicted RBP31.02■■■□□ 2.56
CDK18-215ENST00000506215 PBRM1Q86U86 1689 aa31.02■■■□□ 2.56
CDK18-215ENST00000506215 CHMP7Q8WUX9 453 aaPredicted RBP31■■■□□ 2.55
CDK18-215ENST00000506215 ABCA5Q8WWZ7 1642 aa30.93■■■□□ 2.54
CDK18-215ENST00000506215 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
CDK18-215ENST00000506215 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
CDK18-215ENST00000506215 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
CDK18-215ENST00000506215 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
CDK18-215ENST00000506215 BIVM-ERCC5R4GMW8 1640 aa30.67■■■□□ 2.5
CDK18-215ENST00000506215 WRNQ14191 1432 aaPredicted RBP eCLIP30.66■■■□□ 2.5
CDK18-215ENST00000506215 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
CDK18-215ENST00000506215 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
CDK18-215ENST00000506215 NUP160Q12769 1436 aa30.64■■■□□ 2.49
CDK18-215ENST00000506215 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
CDK18-215ENST00000506215 SHROOM2Q13796 1616 aa30.58■■■□□ 2.49
CDK18-215ENST00000506215 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
CDK18-215ENST00000506215 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
CDK18-215ENST00000506215 ERICH3Q5RHP9 1530 aa30.51■■■□□ 2.47
CDK18-215ENST00000506215 KIF13AQ9H1H9 1805 aa30.31■■■□□ 2.44
CDK18-215ENST00000506215 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
CDK18-215ENST00000506215 RUSC2Q8N2Y8 1516 aa30.3■■■□□ 2.44
CDK18-215ENST00000506215 PRG4Q92954 1404 aaPredicted RBP30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms