RNA–Protein interactions for RNA: ENST00000506114.1

SEMA6A-207, Transcript of semaphorin 6A, humanhuman

TSL 2

Gene SEMA6A, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-207ENST00000506114 NISCHQ9Y2I1 1504 aa18.61■□□□□ 0.57
SEMA6A-207ENST00000506114 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
SEMA6A-207ENST00000506114 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
SEMA6A-207ENST00000506114 ABCC9O60706 1549 aa15.56■□□□□ 0.08
SEMA6A-207ENST00000506114 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
SEMA6A-207ENST00000506114 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
SEMA6A-207ENST00000506114 NACADO15069 1562 aa15.31■□□□□ 0.04
SEMA6A-207ENST00000506114 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
SEMA6A-207ENST00000506114 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
SEMA6A-207ENST00000506114 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
SEMA6A-207ENST00000506114 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
SEMA6A-207ENST00000506114 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
SEMA6A-207ENST00000506114 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
SEMA6A-207ENST00000506114 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
SEMA6A-207ENST00000506114 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
SEMA6A-207ENST00000506114 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
SEMA6A-207ENST00000506114 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
SEMA6A-207ENST00000506114 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
SEMA6A-207ENST00000506114 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
SEMA6A-207ENST00000506114 RSF1Q96T23 1441 aaPredicted RBP14.3□□□□□ -0.12
SEMA6A-207ENST00000506114 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
SEMA6A-207ENST00000506114 WIZO95785 1651 aa14.23□□□□□ -0.13
SEMA6A-207ENST00000506114 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
SEMA6A-207ENST00000506114 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
SEMA6A-207ENST00000506114 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
SEMA6A-207ENST00000506114 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
SEMA6A-207ENST00000506114 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
SEMA6A-207ENST00000506114 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
SEMA6A-207ENST00000506114 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
SEMA6A-207ENST00000506114 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
SEMA6A-207ENST00000506114 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
SEMA6A-207ENST00000506114 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
SEMA6A-207ENST00000506114 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
SEMA6A-207ENST00000506114 CFTRP13569 1480 aa13.71□□□□□ -0.21
SEMA6A-207ENST00000506114 LAMC3Q9Y6N6 1575 aa13.7□□□□□ -0.22
SEMA6A-207ENST00000506114 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
SEMA6A-207ENST00000506114 NESP48681 1621 aa13.61□□□□□ -0.23
SEMA6A-207ENST00000506114 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
SEMA6A-207ENST00000506114 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
SEMA6A-207ENST00000506114 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
SEMA6A-207ENST00000506114 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
SEMA6A-207ENST00000506114 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
SEMA6A-207ENST00000506114 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
SEMA6A-207ENST00000506114 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
SEMA6A-207ENST00000506114 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
SEMA6A-207ENST00000506114 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
SEMA6A-207ENST00000506114 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
SEMA6A-207ENST00000506114 CUX1P39880 1505 aa13.44□□□□□ -0.26
SEMA6A-207ENST00000506114 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
SEMA6A-207ENST00000506114 THOC2Q8NI27 1593 aaKnown RBP13.42□□□□□ -0.26
SEMA6A-207ENST00000506114 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
SEMA6A-207ENST00000506114 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
SEMA6A-207ENST00000506114 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
SEMA6A-207ENST00000506114 WDR62O43379 1518 aa13.37□□□□□ -0.27
SEMA6A-207ENST00000506114 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
SEMA6A-207ENST00000506114 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
SEMA6A-207ENST00000506114 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
SEMA6A-207ENST00000506114 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
SEMA6A-207ENST00000506114 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
SEMA6A-207ENST00000506114 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
SEMA6A-207ENST00000506114 CUX2O14529 1486 aa13.23□□□□□ -0.29
SEMA6A-207ENST00000506114 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
SEMA6A-207ENST00000506114 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
SEMA6A-207ENST00000506114 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
SEMA6A-207ENST00000506114 SOGA1O94964 1423 aa13.18□□□□□ -0.3
SEMA6A-207ENST00000506114 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
SEMA6A-207ENST00000506114 EEA1Q15075 1411 aa13.17□□□□□ -0.3
SEMA6A-207ENST00000506114 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.3
SEMA6A-207ENST00000506114 PBRM1Q86U86 1689 aa13.13□□□□□ -0.31
SEMA6A-207ENST00000506114 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
SEMA6A-207ENST00000506114 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
SEMA6A-207ENST00000506114 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
SEMA6A-207ENST00000506114 KIF21BO75037 1637 aa13.08□□□□□ -0.32
SEMA6A-207ENST00000506114 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
SEMA6A-207ENST00000506114 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
SEMA6A-207ENST00000506114 CUL7Q14999 1698 aa13.07□□□□□ -0.32
SEMA6A-207ENST00000506114 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
SEMA6A-207ENST00000506114 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
SEMA6A-207ENST00000506114 IGF1RP08069 1367 aa13.02□□□□□ -0.33
SEMA6A-207ENST00000506114 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.33
SEMA6A-207ENST00000506114 ADAMTS12P58397 1594 aa13.02□□□□□ -0.33
SEMA6A-207ENST00000506114 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
SEMA6A-207ENST00000506114 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
SEMA6A-207ENST00000506114 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
SEMA6A-207ENST00000506114 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
SEMA6A-207ENST00000506114 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
SEMA6A-207ENST00000506114 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
SEMA6A-207ENST00000506114 RAPGEF2Q9Y4G8 1499 aa12.95□□□□□ -0.34
SEMA6A-207ENST00000506114 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
SEMA6A-207ENST00000506114 CARMIL1Q5VZK9 1371 aa12.93□□□□□ -0.34
SEMA6A-207ENST00000506114 CTTNBP2Q8WZ74 1663 aa12.92□□□□□ -0.34
SEMA6A-207ENST00000506114 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
SEMA6A-207ENST00000506114 CHD1O14646 1710 aa12.89□□□□□ -0.35
SEMA6A-207ENST00000506114 GRIN2AQ12879 1464 aa12.87□□□□□ -0.35
SEMA6A-207ENST00000506114 TNIKQ9UKE5 1360 aa12.85□□□□□ -0.35
SEMA6A-207ENST00000506114 LOC105371045A0A1W2PR82 267 aa12.85□□□□□ -0.35
SEMA6A-207ENST00000506114 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
SEMA6A-207ENST00000506114 NUP160Q12769 1436 aa12.8□□□□□ -0.36
SEMA6A-207ENST00000506114 IQGAP2Q13576 1575 aa12.78□□□□□ -0.36
SEMA6A-207ENST00000506114 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms